Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B11
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0228 - 13278085-13278264,13278405-13278493,13278613-13278736     30   2.1  
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469...    30   2.8  
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799...    29   3.8  
02_01_0502 - 3659564-3659660,3659923-3660061,3660161-3660238,366...    29   6.6  
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129...    29   6.6  
11_06_0372 + 22781438-22781977                                         28   8.7  

>06_02_0228 - 13278085-13278264,13278405-13278493,13278613-13278736
          Length = 130

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +3

Query: 192 LETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLL-KKV 368
           ++T  LR E W  ++E+ +PV    D  E+D+   ++     L   K   D  Q   K++
Sbjct: 2   VQTQTLRAEAWKAIKEEKRPVVYTLDEPEKDDRNNLSLSQGNLANDKARVDLMQNRGKRL 61

Query: 369 RRKVARQLSDK 401
              + +QL +K
Sbjct: 62  EAALTKQLDEK 72


>09_04_0202 -
           15544498-15545037,15546043-15546449,15546874-15546977,
           15547580-15547788,15548092-15549428,15551680-15551941
          Length = 952

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +3

Query: 231 LEEDWKPVDLDE-DRTEEDNEPAMTTMLSALDLKKT 335
           LEE+ KP +++E DR EE+N+P  +T  S    ++T
Sbjct: 875 LEENHKPQEVNEGDREEENNQPGASTGQSGQQQQQT 910


>02_02_0220 -
           7992124-7992351,7992458-7992562,7993499-7993711,
           7993937-7994196,7994425-7994701,7995226-7995371,
           7995519-7995903,7996680-7996964
          Length = 632

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +3

Query: 207 LRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKV 368
           + +EQW KL + W   +  +    +D+EP    +   L   KT   S  + K +
Sbjct: 504 MTDEQWTKLVDMWSSPEHKKQEKYKDSEPTAIDLFKELHCSKTKGFSEPVKKAI 557


>02_01_0502 -
           3659564-3659660,3659923-3660061,3660161-3660238,
           3660486-3660654,3660757-3660873,3660956-3661102,
           3661203-3661388,3661472-3661720,3662196-3662432,
           3662511-3662673,3662748-3662866,3662976-3663068,
           3663595-3663735,3663813-3663896,3663974-3664084,
           3664162-3664260,3664501-3664623,3664908-3664958,
           3665152-3665275,3665357-3665514,3665595-3665709,
           3665931-3666060,3666163-3666328,3667047-3667136,
           3667650-3667857,3668270-3668439,3668542-3668577
          Length = 1199

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +3

Query: 201 ILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKV 380
           I+ R E   K+  +  P  ++  R  E+N  +   ML+ L L    +   Q + KV + +
Sbjct: 386 IVSRPEMLSKMYLEACPKLIERFREREENVKSTEPMLAILLLFSPRWLLKQEVPKVVKSI 445

Query: 381 ARQLSDKSI 407
            RQL +KSI
Sbjct: 446 NRQLREKSI 454


>01_06_0944 +
           33211652-33212427,33212492-33212660,33212825-33212936,
           33213061-33213159,33213237-33213394,33214911-33215062,
           33215162-33215249,33215399-33215476,33215516-33215690,
           33216701-33217002
          Length = 702

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 174 GTKLLXLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTT 338
           G  LL +   L +  +W +L +        E +    N P MT ++SALD + TT
Sbjct: 512 GVLLLEIAWELWKEGRWSELADPSIYNACPEHKESPINRPTMTEIISALDNESTT 566


>11_06_0372 + 22781438-22781977
          Length = 179

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 213 NEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 329
           NE W KL +     D D D  EED+E     +L+A+ L+
Sbjct: 141 NEAWAKLRDGLPLSDSDSDADEEDDED--MALLAAMGLE 177


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,862,211
Number of Sequences: 37544
Number of extensions: 276178
Number of successful extensions: 934
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)