Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B10
(902 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061412-1|AAL28960.1| 342|Drosophila melanogaster LD34388p pro... 141 1e-33
AE014134-853|AAN10522.1| 342|Drosophila melanogaster CG31650-PC... 141 1e-33
AE014134-852|AAF52207.1| 342|Drosophila melanogaster CG31650-PB... 141 1e-33
AE014134-851|AAN10521.1| 342|Drosophila melanogaster CG31650-PA... 141 1e-33
BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p pro... 81 3e-15
AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p pro... 81 3e-15
AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,... 81 3e-15
AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,... 81 3e-15
BT001735-1|AAN71490.1| 840|Drosophila melanogaster RE72291p pro... 35 0.18
AY052035-1|AAK93459.1| 379|Drosophila melanogaster LP03286p pro... 35 0.18
AJ276417-1|CAB77666.1| 790|Drosophila melanogaster putative GM1... 35 0.18
AE013599-3341|AAF46803.2| 795|Drosophila melanogaster CG11061-P... 35 0.18
AE013599-3340|AAF46804.2| 755|Drosophila melanogaster CG11061-P... 35 0.18
AY051517-1|AAK92941.1| 731|Drosophila melanogaster GH16956p pro... 31 1.6
AE013599-2721|AAF57674.2| 731|Drosophila melanogaster CG30115-P... 31 1.6
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P... 31 1.6
AY089688-1|AAL90426.1| 319|Drosophila melanogaster RH65902p pro... 31 2.2
AE014298-3180|AAF50950.1| 319|Drosophila melanogaster CG14618-P... 31 2.2
BT012499-1|AAS93770.1| 347|Drosophila melanogaster GH09281p pro... 29 8.7
AY119482-1|AAM50136.1| 509|Drosophila melanogaster GH07166p pro... 29 8.7
AY089219-1|AAL89957.1| 340|Drosophila melanogaster AT01837p pro... 29 8.7
AE014134-190|AAF51428.2| 347|Drosophila melanogaster CG4415-PA ... 29 8.7
>AY061412-1|AAL28960.1| 342|Drosophila melanogaster LD34388p
protein.
Length = 342
Score = 141 bits (341), Expect = 1e-33
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Frame = +2
Query: 218 AAAHGHSVD-NLERESDGSYRSRDHEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSPEE 391
A +H H + ER DG Y RD H+G+ G HN EFDHEAI+G+ KE++EFD LSP+E
Sbjct: 31 ANSHKHEKHLSKERVKDGIYAPRDAHHHGEDGEHNVEFDHEAIIGNTKEAQEFDSLSPDE 90
Query: 392 AKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTWSE 571
+KRRL +++ MDLN D+ IDR ELK WIL SF KL + D +TW E
Sbjct: 91 SKRRLLILIKMMDLNKDEFIDRHELKAWILRSFKKLSEEEAADRFEEIDQDADERITWKE 150
Query: 572 YLQDAFGVDTE----EEVGPEDTGDSGMLLQEEKAMWSGXXXXXXXXIES**I*GVXNPE 739
YLQD + ++ E E + + D +++++K M++ + NPE
Sbjct: 151 YLQDTYAMEDEDFKKETIDYDSYEDEQKMIKQDKEMFNAADTNKDGVLTLEEFVLFQNPE 210
Query: 740 EHSEMHEFLVQQAXREK 790
EH +M L++ ++K
Sbjct: 211 EHPQMLPILLEHTMQDK 227
>AE014134-853|AAN10522.1| 342|Drosophila melanogaster CG31650-PC,
isoform C protein.
Length = 342
Score = 141 bits (341), Expect = 1e-33
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Frame = +2
Query: 218 AAAHGHSVD-NLERESDGSYRSRDHEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSPEE 391
A +H H + ER DG Y RD H+G+ G HN EFDHEAI+G+ KE++EFD LSP+E
Sbjct: 31 ANSHKHEKHLSKERVKDGIYAPRDAHHHGEDGEHNVEFDHEAIIGNTKEAQEFDSLSPDE 90
Query: 392 AKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTWSE 571
+KRRL +++ MDLN D+ IDR ELK WIL SF KL + D +TW E
Sbjct: 91 SKRRLLILIKMMDLNKDEFIDRHELKAWILRSFKKLSEEEAADRFEEIDQDADERITWKE 150
Query: 572 YLQDAFGVDTE----EEVGPEDTGDSGMLLQEEKAMWSGXXXXXXXXIES**I*GVXNPE 739
YLQD + ++ E E + + D +++++K M++ + NPE
Sbjct: 151 YLQDTYAMEDEDFKKETIDYDSYEDEQKMIKQDKEMFNAADTNKDGVLTLEEFVLFQNPE 210
Query: 740 EHSEMHEFLVQQAXREK 790
EH +M L++ ++K
Sbjct: 211 EHPQMLPILLEHTMQDK 227
>AE014134-852|AAF52207.1| 342|Drosophila melanogaster CG31650-PB,
isoform B protein.
Length = 342
Score = 141 bits (341), Expect = 1e-33
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Frame = +2
Query: 218 AAAHGHSVD-NLERESDGSYRSRDHEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSPEE 391
A +H H + ER DG Y RD H+G+ G HN EFDHEAI+G+ KE++EFD LSP+E
Sbjct: 31 ANSHKHEKHLSKERVKDGIYAPRDAHHHGEDGEHNVEFDHEAIIGNTKEAQEFDSLSPDE 90
Query: 392 AKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTWSE 571
+KRRL +++ MDLN D+ IDR ELK WIL SF KL + D +TW E
Sbjct: 91 SKRRLLILIKMMDLNKDEFIDRHELKAWILRSFKKLSEEEAADRFEEIDQDADERITWKE 150
Query: 572 YLQDAFGVDTE----EEVGPEDTGDSGMLLQEEKAMWSGXXXXXXXXIES**I*GVXNPE 739
YLQD + ++ E E + + D +++++K M++ + NPE
Sbjct: 151 YLQDTYAMEDEDFKKETIDYDSYEDEQKMIKQDKEMFNAADTNKDGVLTLEEFVLFQNPE 210
Query: 740 EHSEMHEFLVQQAXREK 790
EH +M L++ ++K
Sbjct: 211 EHPQMLPILLEHTMQDK 227
>AE014134-851|AAN10521.1| 342|Drosophila melanogaster CG31650-PA,
isoform A protein.
Length = 342
Score = 141 bits (341), Expect = 1e-33
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Frame = +2
Query: 218 AAAHGHSVD-NLERESDGSYRSRDHEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSPEE 391
A +H H + ER DG Y RD H+G+ G HN EFDHEAI+G+ KE++EFD LSP+E
Sbjct: 31 ANSHKHEKHLSKERVKDGIYAPRDAHHHGEDGEHNVEFDHEAIIGNTKEAQEFDSLSPDE 90
Query: 392 AKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTWSE 571
+KRRL +++ MDLN D+ IDR ELK WIL SF KL + D +TW E
Sbjct: 91 SKRRLLILIKMMDLNKDEFIDRHELKAWILRSFKKLSEEEAADRFEEIDQDADERITWKE 150
Query: 572 YLQDAFGVDTE----EEVGPEDTGDSGMLLQEEKAMWSGXXXXXXXXIES**I*GVXNPE 739
YLQD + ++ E E + + D +++++K M++ + NPE
Sbjct: 151 YLQDTYAMEDEDFKKETIDYDSYEDEQKMIKQDKEMFNAADTNKDGVLTLEEFVLFQNPE 210
Query: 740 EHSEMHEFLVQQAXREK 790
EH +M L++ ++K
Sbjct: 211 EHPQMLPILLEHTMQDK 227
>BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p
protein.
Length = 329
Score = 80.6 bits (190), Expect = 3e-15
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = +2
Query: 215 SAAAHGHSVDNLERESDGSYRSRD--HEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSP 385
+A G S ++ E + D H + D G HN +FDHEA LG ES++FD L+P
Sbjct: 16 TAVISGASASSIPEELPHNPLEHDPLHPRHFDGGEHNAQFDHEAFLGP-DESKKFDSLTP 74
Query: 386 EEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTW 565
EE++RRL +++ ++D N D ++ ELK WI + + + + +++W
Sbjct: 75 EESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDNNETISW 134
Query: 566 SEYLQDAFG-VD--TEEEVGPEDTGDS-GMLLQEEKAMWSGXXXXXXXXIES**I*GVXN 733
Y+Q +G +D + +E E+ G S LL+ ++ WS + +
Sbjct: 135 DSYMQTVYGFMDDLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLH 194
Query: 734 PEEHSEMHEFLVQQ 775
PE+H M ++++
Sbjct: 195 PEDHPSMKGVVLRE 208
>AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p
protein.
Length = 329
Score = 80.6 bits (190), Expect = 3e-15
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = +2
Query: 215 SAAAHGHSVDNLERESDGSYRSRD--HEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSP 385
+A G S ++ E + D H + D G HN +FDHEA LG ES++FD L+P
Sbjct: 16 TAVISGASASSIPEELPHNPLEHDPLHPRHFDGGEHNAQFDHEAFLGP-DESKKFDSLTP 74
Query: 386 EEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTW 565
EE++RRL +++ ++D N D ++ ELK WI + + + + +++W
Sbjct: 75 EESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDNNETISW 134
Query: 566 SEYLQDAFG-VD--TEEEVGPEDTGDS-GMLLQEEKAMWSGXXXXXXXXIES**I*GVXN 733
Y+Q +G +D + +E E+ G S LL+ ++ WS + +
Sbjct: 135 DSYMQTVYGFMDDLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLH 194
Query: 734 PEEHSEMHEFLVQQ 775
PE+H M ++++
Sbjct: 195 PEDHPSMKGVVLRE 208
>AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,
isoform C protein.
Length = 329
Score = 80.6 bits (190), Expect = 3e-15
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = +2
Query: 215 SAAAHGHSVDNLERESDGSYRSRD--HEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSP 385
+A G S ++ E + D H + D G HN +FDHEA LG ES++FD L+P
Sbjct: 16 TAVISGASASSIPEELPHNPLEHDPLHPRHFDGGEHNAQFDHEAFLGP-DESKKFDSLTP 74
Query: 386 EEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTW 565
EE++RRL +++ ++D N D ++ ELK WI + + + + +++W
Sbjct: 75 EESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDNNETISW 134
Query: 566 SEYLQDAFG-VD--TEEEVGPEDTGDS-GMLLQEEKAMWSGXXXXXXXXIES**I*GVXN 733
Y+Q +G +D + +E E+ G S LL+ ++ WS + +
Sbjct: 135 DSYMQTVYGFMDDLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLH 194
Query: 734 PEEHSEMHEFLVQQ 775
PE+H M ++++
Sbjct: 195 PEDHPSMKGVVLRE 208
>AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,
isoform A protein.
Length = 329
Score = 80.6 bits (190), Expect = 3e-15
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = +2
Query: 215 SAAAHGHSVDNLERESDGSYRSRD--HEHYGDSG-HNTEFDHEAILGSVKESEEFDRLSP 385
+A G S ++ E + D H + D G HN +FDHEA LG ES++FD L+P
Sbjct: 16 TAVISGASASSIPEELPHNPLEHDPLHPRHFDGGEHNAQFDHEAFLGP-DESKKFDSLTP 74
Query: 386 EEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXNRDGSVTW 565
EE++RRL +++ ++D N D ++ ELK WI + + + + +++W
Sbjct: 75 EESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDNNETISW 134
Query: 566 SEYLQDAFG-VD--TEEEVGPEDTGDS-GMLLQEEKAMWSGXXXXXXXXIES**I*GVXN 733
Y+Q +G +D + +E E+ G S LL+ ++ WS + +
Sbjct: 135 DSYMQTVYGFMDDLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLH 194
Query: 734 PEEHSEMHEFLVQQ 775
PE+H M ++++
Sbjct: 195 PEDHPSMKGVVLRE 208
>BT001735-1|AAN71490.1| 840|Drosophila melanogaster RE72291p
protein.
Length = 840
Score = 34.7 bits (76), Expect = 0.18
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 227 HGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDH 331
H HS D+ + SDG DH+H + H+ DH
Sbjct: 600 HNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDH 634
>AY052035-1|AAK93459.1| 379|Drosophila melanogaster LP03286p
protein.
Length = 379
Score = 34.7 bits (76), Expect = 0.18
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 227 HGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDH 331
H HS D+ + SDG DH+H + H+ DH
Sbjct: 139 HNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDH 173
>AJ276417-1|CAB77666.1| 790|Drosophila melanogaster putative GM130
protein protein.
Length = 790
Score = 34.7 bits (76), Expect = 0.18
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 227 HGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDH 331
H HS D+ + SDG DH+H + H+ DH
Sbjct: 550 HNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDH 584
>AE013599-3341|AAF46803.2| 795|Drosophila melanogaster CG11061-PA,
isoform A protein.
Length = 795
Score = 34.7 bits (76), Expect = 0.18
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 227 HGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDH 331
H HS D+ + SDG DH+H + H+ DH
Sbjct: 555 HNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDH 589
>AE013599-3340|AAF46804.2| 755|Drosophila melanogaster CG11061-PB,
isoform B protein.
Length = 755
Score = 34.7 bits (76), Expect = 0.18
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 227 HGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDH 331
H HS D+ + SDG DH+H + H+ DH
Sbjct: 515 HNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDH 549
>AY051517-1|AAK92941.1| 731|Drosophila melanogaster GH16956p
protein.
Length = 731
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 248 LERESDGSYRSRDHE-HYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLALMLP 421
L+ + Y S DHE ++ D + +L +K S+EF+R+ ++ KRR + + P
Sbjct: 314 LDESTQDQYYSPDHETELLSPAEKSKRDAQIVLDLLKNSKEFERIYNKQQKRRESPVSP 372
>AE013599-2721|AAF57674.2| 731|Drosophila melanogaster CG30115-PC,
isoform C protein.
Length = 731
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 248 LERESDGSYRSRDHE-HYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLALMLP 421
L+ + Y S DHE ++ D + +L +K S+EF+R+ ++ KRR + + P
Sbjct: 314 LDESTQDQYYSPDHETELLSPAEKSKRDAQIVLDLLKNSKEFERIYNKQQKRRESPVSP 372
>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
isoform D protein.
Length = 1593
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 248 LERESDGSYRSRDHE-HYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLALMLP 421
L+ + Y S DHE ++ D + +L +K S+EF+R+ ++ KRR + + P
Sbjct: 1176 LDESTQDQYYSPDHETELLSPAEKSKRDAQIVLDLLKNSKEFERIYNKQQKRRESPVSP 1234
>AY089688-1|AAL90426.1| 319|Drosophila melanogaster RH65902p
protein.
Length = 319
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 200 NLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESEE-FDR 376
NL+F+ +GH ++ ++ + + ++Y D GH F+H ++ ES+ D+
Sbjct: 134 NLHFTGIRRNGHIHESFKKNE--GWENWHVQYYFDRGHTDIFEHSQLVYLTCESDRVLDK 191
Query: 377 LSP 385
L P
Sbjct: 192 LQP 194
>AE014298-3180|AAF50950.1| 319|Drosophila melanogaster CG14618-PA
protein.
Length = 319
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 200 NLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESEE-FDR 376
NL+F+ +GH ++ ++ + + ++Y D GH F+H ++ ES+ D+
Sbjct: 134 NLHFTGIRRNGHIHESFKKNE--GWENWHVQYYFDRGHTDIFEHSQLVYLTCESDRVLDK 191
Query: 377 LSP 385
L P
Sbjct: 192 LQP 194
>BT012499-1|AAS93770.1| 347|Drosophila melanogaster GH09281p
protein.
Length = 347
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 317 TEFDHEAILGSVK-ESEEFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKK 472
T+ D + LG+V + E + S E K R LM K+DL +N+ R+ +KK
Sbjct: 167 TQPDEQGQLGTVAVRTREVSKQSRGERKARRILM--KLDLKPMENVARVTMKK 217
>AY119482-1|AAM50136.1| 509|Drosophila melanogaster GH07166p
protein.
Length = 509
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 567 PSTCKTRSEWTPRRRSDQKTRETLACCYKKRKRCGXVADKNG 692
P+ C+ +W +R D +T ++ K +C +KNG
Sbjct: 281 PTDCQVIKKWLTKRADDSETANYISAHTKDCPKCHICIEKNG 322
>AY089219-1|AAL89957.1| 340|Drosophila melanogaster AT01837p
protein.
Length = 340
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 317 TEFDHEAILGSVK-ESEEFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKK 472
T+ D + LG+V + E + S E K R LM K+DL +N+ R+ +KK
Sbjct: 160 TQPDEQGQLGTVAVRTREVSKQSRGERKARRILM--KLDLKPMENVARVTMKK 210
>AE014134-190|AAF51428.2| 347|Drosophila melanogaster CG4415-PA
protein.
Length = 347
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 317 TEFDHEAILGSVK-ESEEFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKK 472
T+ D + LG+V + E + S E K R LM K+DL +N+ R+ +KK
Sbjct: 167 TQPDEQGQLGTVAVRTREVSKQSRGERKARRILM--KLDLKPMENVARVTMKK 217
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,437,632
Number of Sequences: 53049
Number of extensions: 692476
Number of successful extensions: 3062
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2876
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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