Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B10
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 69 6e-12
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 69 6e-12
U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical p... 49 5e-06
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 36 0.052
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 32 0.49
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 30 2.6
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53154-3|AAC25852.1| 346|Caenorhabditis elegans Hypothetical pr... 29 6.0
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 28 7.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 7.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 7.9
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 28 7.9
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 28 7.9
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 68.5 bits (160), Expect = 6e-12
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Frame = +2
Query: 185 ILLFNNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESE 364
+LLF L ++A A HS D S+D EH+ H+ ++DHE LG +
Sbjct: 3 VLLFVGLLAATALASHHSSDP----------SKDGEHFKGKEHDKKYDHEQFLGK-DTAA 51
Query: 365 EFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXN 544
EFD L+PE++K +LA ++PKMD ++D I+ ELK I +
Sbjct: 52 EFDELTPEKSKEKLAKLVPKMDADSDGFIEENELKDHINFMQKRYVNNDVDRTWKNYKAE 111
Query: 545 R--DGSVTWSEYLQDAFGVDTEEEVGPEDTGDSGMLLQEEKAMWS 673
+ DG + W +Y + +G + + G E + + ++ ++ W+
Sbjct: 112 KIVDGKIKWEDYREMVYG--SADGAGQELSPEYAKMIARDEKRWA 154
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 68.5 bits (160), Expect = 6e-12
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Frame = +2
Query: 185 ILLFNNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESE 364
+LLF L ++A A HS D S+D EH+ H+ ++DHE LG +
Sbjct: 3 VLLFVGLLAATALASHHSSDP----------SKDGEHFKGKEHDKKYDHEQFLGK-DTAA 51
Query: 365 EFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXXXXXN 544
EFD L+PE++K +LA ++PKMD ++D I+ ELK I +
Sbjct: 52 EFDELTPEKSKEKLAKLVPKMDADSDGFIEENELKDHINFMQKRYVNNDVDRTWKNYKAE 111
Query: 545 R--DGSVTWSEYLQDAFGVDTEEEVGPEDTGDSGMLLQEEKAMWS 673
+ DG + W +Y + +G + + G E + + ++ ++ W+
Sbjct: 112 KIVDGKIKWEDYREMVYG--SADGAGQELSPEYAKMIARDEKRWA 154
>U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical
protein M03F4.7b protein.
Length = 91
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +2
Query: 185 ILLFNNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESE 364
+LLF L ++A A HS D S+D EH+ H+ ++DHE LG +
Sbjct: 3 VLLFVGLLAATALASHHSSDP----------SKDGEHFKGKEHDKKYDHEQFLGK-DTAA 51
Query: 365 EFDRLSPEEAKRRLALMLPK 424
EFD L+PE++K +LA +L K
Sbjct: 52 EFDELTPEKSKEKLAYVLLK 71
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.052
Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 15/161 (9%)
Frame = +2
Query: 353 KESEEFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLXXXXXXXXXXX 532
K+ +L+ + + + +D NND +D+ E+ W+ S+ K
Sbjct: 33 KKPASEQKLNLKSGQESVEKFAKALDTNNDGFVDKSEILAWVSESYQKTVDREAVERISE 92
Query: 533 XXXNRDG---------------SVTWSEYLQDAFGVDTEEEVGPEDTGDSGMLLQEEKAM 667
N DG V+W EYL D+F +EE+ + L+ ++K
Sbjct: 93 LDENADGFLYFKNTLFSLVDRKHVSWEEYLADSF---PDEEL---HNKEEESLIAQDKMY 146
Query: 668 WSGXXXXXXXXIES**I*GVXNPEEHSEMHEFLVQQAXREK 790
+ + + NPE H MH L+ EK
Sbjct: 147 FKQADEDNDGKLNLEELASFLNPEHHPHMHPVLIAVTLLEK 187
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 197 NNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNT--EFDHEAILGS 349
N++ F+S H H + ++R D Y+ ++ HY D +NT +D+E G+
Sbjct: 23 NHISFNSFTLHIH-FNTMDRRRDPRYKQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 504 EKRQKNVCQKRTRTATGL*LGPSTCKTRSEWTPRRRSDQKTRETLACCYKKRKR 665
++ K +R R + G T K + R +S K + L+CC KK+K+
Sbjct: 5 DQAPKKKSHERKRKEKRVHTGNGTAKKHHKRKSRSKSKNKPKNGLSCCRKKKKK 58
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 266 GSYRSRDHEHYGDSGHNTEFDHEAILGSVKESEE-FDRLSPEEAKRRLALMLPKMDLNND 442
G +R R H H DS + +LG K+ ++ R EE K + ++P + +D
Sbjct: 161 GQFRGRAHSHDQDSPLPYNEEIAKLLGQTKQGDKGLTRQETEEKKTQTVQIVPPL---SD 217
Query: 443 QNIDRIELKKWILNSF 490
+ R+ L L+SF
Sbjct: 218 EEKYRLTLDPEFLDSF 233
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Frame = +2
Query: 242 DNLERESDGSYRSRD-HEHYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEA-------K 397
D L+ ++DGS RD + H +L +K SE DR++ + +
Sbjct: 80 DRLDADNDGSIDIRDLTQALSLQAHIPASVAPKLLERMK-SEHSDRVTYADFTNYVIAHE 138
Query: 398 RRLALMLPKMDLNNDQNIDRIELKKWILNSFVKL 499
RLA + K+DLN+D +D E+K + V L
Sbjct: 139 ARLAEVFDKIDLNSDGEVDMAEIKSYCKEMGVNL 172
>U53154-3|AAC25852.1| 346|Caenorhabditis elegans Hypothetical
protein C33G8.8 protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 140 FLHMFDKMAYRCVLIILLFNNLYFS 214
FL FDK+ Y + ++LLF++ Y +
Sbjct: 244 FLKKFDKIEYMAIFLLLLFDSAYMN 268
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +3
Query: 570 STCKTRSEWTPRRRSDQKTRETLACCYKKRKRCGXVADKNGDGKLNLDEFEVXRIRRSTP 749
S+C+ +S + +D + R A Y RK CG AD D K E ++
Sbjct: 17 SSCQDKSPYC--NPNDCEVRPGYAMVYC-RKTCGNCADFCEDSKFITCSAER---KKDCD 70
Query: 750 RCTSSWCSRLCGK 788
S +C RLCGK
Sbjct: 71 DMLSDYCPRLCGK 83
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 272 YRSRDHEHYGDSGHNTEFDH---EAILGSVKESEEFDRLSPE 388
Y+S ++ +T+F+H E+ + KE+EEFD PE
Sbjct: 2773 YQSEQYQDDSAQSSHTDFEHHMPESPIEHEKETEEFDHSHPE 2814
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 272 YRSRDHEHYGDSGHNTEFDH---EAILGSVKESEEFDRLSPE 388
Y+S ++ +T+F+H E+ + KE+EEFD PE
Sbjct: 2773 YQSEQYQDDSAQSSHTDFEHHMPESPIEHEKETEEFDHSHPE 2814
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 275 RSRDHEHYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLALMLPKMDLNNDQNID 454
+SR E G SG + E E + ++ DRL E + R + +L ++ ++
Sbjct: 71 KSRKRESTGSSGSSEE---EKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLN 127
Query: 455 RIELKKWILNSFVKL 499
++K W N KL
Sbjct: 128 ESQIKIWFQNKRAKL 142
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 275 RSRDHEHYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLALMLPKMDLNNDQNID 454
+SR E G SG + E E + ++ DRL E + R + +L ++ ++
Sbjct: 71 KSRKRESTGSSGSSEE---EKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLN 127
Query: 455 RIELKKWILNSFVKL 499
++K W N KL
Sbjct: 128 ESQIKIWFQNKRAKL 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,840
Number of Sequences: 27780
Number of extensions: 351815
Number of successful extensions: 1106
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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