Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B07
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p pro...   155   8e-38
AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC...   155   8e-38
AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB...   155   8e-38
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    33   0.70 
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    32   0.92 

>AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p
           protein.
          Length = 228

 Score =  155 bits (376), Expect = 8e-38
 Identities = 67/124 (54%), Positives = 93/124 (75%)
 Frame = +2

Query: 269 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 448
           MS+ WT IAG+LY EIALV+L++LP+ +P RWN+FFKS+  SM  +   +YF + +G+L 
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMGILV 60

Query: 449 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 628
           +FL++A+RE+RKYS +   +  HL  EM+  +KLFRAQRNFYI GFAIFL  VIRRL+ +
Sbjct: 61  IFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRNFYISGFAIFLALVIRRLVNL 120

Query: 629 LIIQ 640
           +  Q
Sbjct: 121 ICTQ 124


>AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC,
           isoform C protein.
          Length = 228

 Score =  155 bits (376), Expect = 8e-38
 Identities = 67/124 (54%), Positives = 93/124 (75%)
 Frame = +2

Query: 269 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 448
           MS+ WT IAG+LY EIALV+L++LP+ +P RWN+FFKS+  SM  +   +YF + +G+L 
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMGILV 60

Query: 449 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 628
           +FL++A+RE+RKYS +   +  HL  EM+  +KLFRAQRNFYI GFAIFL  VIRRL+ +
Sbjct: 61  IFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRNFYISGFAIFLALVIRRLVNL 120

Query: 629 LIIQ 640
           +  Q
Sbjct: 121 ICTQ 124


>AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB,
           isoform B protein.
          Length = 228

 Score =  155 bits (376), Expect = 8e-38
 Identities = 67/124 (54%), Positives = 93/124 (75%)
 Frame = +2

Query: 269 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 448
           MS+ WT IAG+LY EIALV+L++LP+ +P RWN+FFKS+  SM  +   +YF + +G+L 
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMGILV 60

Query: 449 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 628
           +FL++A+RE+RKYS +   +  HL  EM+  +KLFRAQRNFYI GFAIFL  VIRRL+ +
Sbjct: 61  IFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRNFYISGFAIFLALVIRRLVNL 120

Query: 629 LIIQ 640
           +  Q
Sbjct: 121 ICTQ 124


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
           protein.
          Length = 1711

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 LFSMFRENVAVYFYVFIGVLALFLIDAVREIRKYSNV 496
           LF+MF  N+ ++ Y+ IG+  +F++ A+  ++ ++ V
Sbjct: 758 LFTMFDGNMRIFIYISIGICVVFIVIALLTLKLFNGV 794


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
          Length = 1870

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +2

Query: 386  LFSMFRENVAVYFYVFIGVLALFLIDAVREIRKYSNV 496
            LF+MF  N+ ++ Y+ IG+  +F++ A+  ++ ++ V
Sbjct: 917  LFTMFDGNMRIFIYISIGICVVFIVIALITLKLFNGV 953


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,270,947
Number of Sequences: 53049
Number of extensions: 481054
Number of successful extensions: 881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)