Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B06
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.3
07_01_0080 + 587674-588510 31 1.7
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.2
06_03_1172 - 28147957-28148274,28149362-28149877 30 2.9
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 30 2.9
06_03_1363 - 29576265-29577575 29 3.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.8
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 3.8
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.1
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.1
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 5.1
06_01_1013 - 7931756-7935109 29 5.1
02_02_0240 + 8196140-8198248,8198381-8198650 29 6.7
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 6.7
07_03_1382 - 26170563-26170631,26171151-26171843 28 8.8
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -3
Query: 566 GXGGGGPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLGXXXXXKKXXPPX 387
G P PP P PPPPP KK P PP PP
Sbjct: 726 GPSAPAPPLPPPLPAAANK--RNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPP 783
Query: 386 L 384
L
Sbjct: 784 L 784
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = -3
Query: 548 PKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLGXXXXXKKXXPP 390
P PP P + + PPPPP P PP + PP
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPP 619
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 513 PPPPGXXGXXFXXPPPXPP 569
PPPP F PPP PP
Sbjct: 551 PPPPSGNKPAFSPPPPPPP 569
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = -3
Query: 548 PKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLGXXXXXKKXXPP 390
P PP G PPP P K+ P PP L PP
Sbjct: 715 PPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPP 767
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 557 GGGPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPP 432
G PP G G F PPPPP P PP
Sbjct: 72 GAASTSTPPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPP 113
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 507 KXPPPPGXXGXXFXXPPPXPPXKKGG 584
K PPPP PPP P KKGG
Sbjct: 351 KGPPPPPPPKGPSPPPPPPPGGKKGG 376
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -3
Query: 548 PKXXPPXPXGGGXFXXX--KKXPPPPPRXXKKKXXGXPAPPXLG 423
PK PP P G K PPPP K G P PP G
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -3
Query: 551 GPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPP 432
GP PP P GG PPPPP+ + P P
Sbjct: 361 GPSPPPPPPPGG----KKGGPPPPPPKGGASRPPAAPGVP 396
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 548 PKXXPP-XPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLGXXXXXKKXXPP 390
PK PP P G K PPPPP K P PP G PP
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPP---PPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 513 PPPPGXXGXXFXXPPPXPPXKKGG 584
PPPP G PPP PP KGG
Sbjct: 364 PPPPPPPGGKKGGPPPPPP--KGG 385
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 554 GGPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLG 423
G P PP P GG + PPPPP P PP G
Sbjct: 290 GMPPRIPPPPVGG------TQPPPPPPPLANGPPRSIPPPPMTG 327
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 566 GXGGGGPKXXPPXPXGGGXFXXXKKXPPPPP 474
G GGG P PP P F PPPP
Sbjct: 5 GAGGGAPPPPPPSPPSVYPFLPPATFIPPPP 35
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = -3
Query: 548 PKXXPPXPXGGGXFXXX-----KKXPPPPPRXXKKKXXGXPAPP 432
P PP P G + + PPPPP KK P+PP
Sbjct: 128 PPPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHVLKKVPSHPSPP 171
>06_03_1363 - 29576265-29577575
Length = 436
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -3
Query: 551 GPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPP 432
G K P GG PPPPP +++ P PP
Sbjct: 370 GGKACVVAPGGGKVLIVDVTPPPPPPPAARRESWAAPPPP 409
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/106 (27%), Positives = 32/106 (30%), Gaps = 9/106 (8%)
Frame = -3
Query: 566 GXGGGGPKXXPPXPXGGGXFXXXKKXPP-----PPPRXXKKKXXGXPAPPXLGXXXXXKK 402
G GG P PP P G + P PPP G P PP +G +
Sbjct: 1076 GIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQA 1135
Query: 401 XXPPXLFXKKNFFXXXFXXGGL----XXXXXFFFXGGXXPPPXGGG 276
P L GGL F GG PP GG
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGG 1181
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -3
Query: 566 GXGGGGPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXL 426
G G G P PP PPPPP + G P PP L
Sbjct: 344 GAGSGPPPPPPPAAPAAPRPPGPGPGPPPPP-GAAGRGGGGPPPPAL 389
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 513 PPPPGXXGXXFXXPPPXPPXKKG 581
PPPP PPP PP KKG
Sbjct: 361 PPPPPPPPPPPRPPPPPPPIKKG 383
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 513 PPPPGXXGXXFXXPPPXPPXKKGG 584
PPPP G PPP PP K GG
Sbjct: 615 PPPPRPPGAP---PPPPPPGKPGG 635
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 513 PPPPGXXGXXFXXPPPXPPXKKGG 584
PPPP G PPP PP K GG
Sbjct: 920 PPPPRPPGAP---PPPPPPGKPGG 940
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 566 GXGGGGPKXXPPXPXGGG 513
G GGGGP PP GGG
Sbjct: 111 GGGGGGPPSLPPGAGGGG 128
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 545 KXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLGXXXXXKKXXPPXL 384
K P P K PPPPP K G P PP K PP L
Sbjct: 580 KASPVPPPEPSPPPAPKAAPPPPP--PKSTGPGPPRPPPPAMPGSSKTRPPPPL 631
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 560 GGGGPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAP 435
GGGG + PP PPPPP+ +++ PAP
Sbjct: 79 GGGGQRRGPPQERPSAA------PPPPPPQQQQRQQHAAPAP 114
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 566 GXGGGGPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPP 432
G G P+ PP P GGG K PPP + G PP
Sbjct: 13 GDGDSHPQQPPPPPPGGG-----AKPEPPPTVATHTRPLGIIHPP 52
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 551 GPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPP 432
GPK PP P K P P P+ K P PP
Sbjct: 184 GPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGPP 223
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 551 GPKXXPPXPXGGGXFXXXKKXPPPPPRXXKKKXXGXPAPPXLG 423
GPK PP P G K P P P+ K P PP G
Sbjct: 175 GPKPKPPKP--GPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPG 215
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 513 PPPPGXXGXXFXXPPPXPPXKKGG 584
PPPP G PPP PP + G
Sbjct: 187 PPPPQPSGDANENPPPPPPPLRTG 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,811,143
Number of Sequences: 37544
Number of extensions: 381532
Number of successful extensions: 2521
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2064
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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