Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B06
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 554 GGPKXXPPXPXGGGXFXXXKKXPPPPP 474
           GGP   PP P  GG          PPP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPP 551



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 512 PPPPXGXGAXXXXPPPXXP 568
           PPPP   GA    PP   P
Sbjct: 531 PPPPPPGGAVLNIPPQFLP 549


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 558 GGGXXXXAPXPXGGGG 511
           GGG     P P GGGG
Sbjct: 214 GGGGSSGGPGPGGGGG 229



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 560 GGGGPKXXPPXPXGGG 513
           GGGG     P P GGG
Sbjct: 213 GGGGGSSGGPGPGGGG 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,736
Number of Sequences: 2352
Number of extensions: 6215
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)