Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B03
(911 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 362 8e-99
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 358 1e-97
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 303 5e-81
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 294 2e-78
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 267 2e-70
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 267 3e-70
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 231 2e-59
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 225 9e-58
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 222 9e-57
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 220 5e-56
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 213 7e-54
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 205 1e-51
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 200 4e-50
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 180 3e-44
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 169 1e-40
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 167 3e-40
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 160 4e-38
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 156 8e-37
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 155 1e-36
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 153 6e-36
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 147 3e-34
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 140 6e-32
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 127 4e-28
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 123 6e-27
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 107 4e-22
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 104 4e-21
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 103 6e-21
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 101 3e-20
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 100 6e-20
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 99 2e-19
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 98 2e-19
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 98 3e-19
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 93 9e-18
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-17
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 89 1e-16
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 88 3e-16
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 86 1e-15
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 85 2e-15
UniRef50_A4EBH1 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 83 1e-14
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 83 1e-14
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 82 2e-14
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 81 4e-14
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 81 4e-14
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 81 4e-14
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 78 4e-13
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 75 3e-12
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 74 4e-12
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 74 6e-12
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 73 8e-12
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 73 1e-11
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 73 1e-11
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 73 1e-11
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 72 2e-11
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 71 3e-11
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 71 4e-11
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 71 5e-11
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 71 5e-11
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 70 7e-11
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 70 7e-11
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 70 1e-10
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 69 2e-10
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 69 2e-10
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 67 7e-10
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 65 3e-09
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 64 5e-09
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 64 5e-09
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 63 8e-09
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 63 8e-09
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 63 8e-09
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 63 8e-09
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 62 2e-08
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 62 2e-08
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 62 3e-08
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 62 3e-08
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 60 6e-08
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 60 6e-08
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 60 8e-08
UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5; ... 60 1e-07
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 60 1e-07
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 59 1e-07
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 59 1e-07
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 59 2e-07
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 59 2e-07
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 58 2e-07
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 58 4e-07
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 58 4e-07
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 58 4e-07
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 57 5e-07
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 57 7e-07
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 56 9e-07
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 56 2e-06
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 56 2e-06
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 55 2e-06
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 54 5e-06
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 54 7e-06
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 53 9e-06
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 53 9e-06
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 53 9e-06
UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n... 53 1e-05
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 53 1e-05
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 52 2e-05
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 52 3e-05
UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:... 52 3e-05
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 51 4e-05
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 51 4e-05
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 51 4e-05
UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA... 51 5e-05
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 51 5e-05
UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio... 51 5e-05
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 51 5e-05
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 50 6e-05
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 50 8e-05
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 50 1e-04
UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney... 49 1e-04
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 49 2e-04
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 48 4e-04
UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ... 47 8e-04
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 46 0.002
UniRef50_Q8VNS1 Cluster: EscN protein; n=11; Enterobacteriaceae|... 45 0.002
UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1; R... 44 0.004
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 44 0.005
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 44 0.007
UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac... 41 0.038
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 41 0.038
UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26; ... 41 0.050
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 40 0.12
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 39 0.15
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 39 0.15
UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ... 39 0.20
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 38 0.27
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 38 0.47
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 37 0.62
UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:... 37 0.62
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.82
UniRef50_O83281 Cluster: Transcription termination factor rho; n... 37 0.82
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.82
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 36 1.1
UniRef50_P21212 Cluster: Uncharacterized protein in lcrE 5'regio... 36 1.1
UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu... 36 1.1
UniRef50_Q4TFT9 Cluster: Chromosome undetermined SCAF4210, whole... 36 1.4
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 36 1.4
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 36 1.4
UniRef50_Q02ZT7 Cluster: Lipopolysaccharide biosynthesis glycosy... 36 1.9
UniRef50_A0GA71 Cluster: Putative uncharacterized protein; n=1; ... 36 1.9
UniRef50_Q8G5D1 Cluster: Excinuclease ABC subunit A-like protein... 35 2.5
UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr... 35 2.5
UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n... 35 2.5
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 35 2.5
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 35 2.5
UniRef50_A6GN32 Cluster: Type III secretion protein; n=1; Limnob... 35 3.3
UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; ... 35 3.3
UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/... 34 4.4
UniRef50_O45827 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_O67031 Cluster: Transcription termination factor rho; n... 34 4.4
UniRef50_A6AXF1 Cluster: VcsN2; n=7; Vibrio|Rep: VcsN2 - Vibrio ... 34 5.8
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 34 5.8
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 34 5.8
UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome s... 33 7.7
UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase alpha/... 33 7.7
UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF5... 33 7.7
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 33 7.7
UniRef50_Q22MH0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10; ... 33 7.7
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 362 bits (890), Expect = 8e-99
Identities = 181/229 (79%), Positives = 199/229 (86%)
Frame = +2
Query: 68 LGAAPKAALVSSWSCLATXXXXXXXFXAXSXXQAEXLVXFSSGLKGMALNLEPDNVGVVV 247
LG APKA L + L+ + + QA+ +V FSSGLKGMALNLEPDNVGVVV
Sbjct: 59 LGVAPKADLEETGRVLSIGDGIARVY-GLNNIQADEMVEFSSGLKGMALNLEPDNVGVVV 117
Query: 248 FGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG 427
FGNDKLIK+G IVKRTGAIVDVPVG+++LGRVVDALGN IDGKG I+TK R RVGIKAPG
Sbjct: 118 FGNDKLIKQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPG 177
Query: 428 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 607
IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ+RFN+ +DE
Sbjct: 178 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDE 237
Query: 608 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 754
KKLYCIYVAIGQKRSTVAQIVKRLTD+GA+ Y++IVSATASDAAPLQY
Sbjct: 238 SKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQY 286
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 358 bits (881), Expect = 1e-97
Identities = 173/197 (87%), Positives = 187/197 (94%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRV 343
QAE +V FSSGLKGM+LNLEPDNVGVVVFGNDKLIKEG IVKRTGAIVDVPVGE++LGRV
Sbjct: 91 QAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRV 150
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
VDALGN IDGKGPI +K+R RVG+KAPGIIPR+SVREPMQTGIKAVDSLVPIGRGQRELI
Sbjct: 151 VDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELI 210
Query: 524 IGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
IGDRQTGKT++AIDTIINQ+RFN G DEKKKLYCIYVAIGQKRSTVAQ+VKRLTDA A+
Sbjct: 211 IGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK 270
Query: 704 YTIIVSATASDAAPLQY 754
YTI+VSATASDAAPLQY
Sbjct: 271 YTIVVSATASDAAPLQY 287
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 303 bits (743), Expect = 5e-81
Identities = 149/198 (75%), Positives = 172/198 (86%), Gaps = 1/198 (0%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRV 343
QA +V FSSG++GMALNLE DNVG+VV GND+ I+EG IVKRTGAIVDVP+G ++LGRV
Sbjct: 71 QAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRV 130
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
DALGNPIDG GP+ T +R RV +KAPGIIPR SV EPMQTG+KAVD LVPIGRGQRELI
Sbjct: 131 FDALGNPIDGHGPVKTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELI 190
Query: 524 IGDRQTGKTALAIDTIINQQ-RFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAI 700
IGDRQTGKTA+AIDTIINQ+ F+ G D+ K+LYCIYVAIGQKRSTVA +VK LT AGA+
Sbjct: 191 IGDRQTGKTAIAIDTIINQKPNFDSG-DKNKQLYCIYVAIGQKRSTVANLVKILTQAGAM 249
Query: 701 NYTIIVSATASDAAPLQY 754
YTI+V+ATAS+AAPLQY
Sbjct: 250 KYTIVVAATASEAAPLQY 267
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 294 bits (721), Expect = 2e-78
Identities = 143/198 (72%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRV 343
QA +V F+SG+KGMALNLE +NVG+V+FG+D IKEG IVKRTG+IVDVPVG+ +LGRV
Sbjct: 49 QAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRV 108
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
VDALG PIDGKG + R RV +KAPGII R SV EPMQTG+KAVDSLVPIGRGQRELI
Sbjct: 109 VDALGVPIDGKGALSAVERRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELI 168
Query: 524 IGDRQTGKTALAIDTIINQQRFN-KGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAI 700
IGDRQTGKTA+AIDTI+NQ++ N +G + +KLYC+YVAIGQKRSTVAQ+VK L++AGA+
Sbjct: 169 IGDRQTGKTAIAIDTILNQKQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGAL 228
Query: 701 NYTIIVSATASDAAPLQY 754
Y+IIV+ATASD APLQ+
Sbjct: 229 EYSIIVAATASDPAPLQF 246
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 267 bits (655), Expect = 2e-70
Identities = 129/170 (75%), Positives = 145/170 (85%)
Frame = +2
Query: 206 MALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 385
M+LNL PD VGVVVFGNDKLIKEG IVKRT A VDVPVG+++ G VVDALGN DGKGPI
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGKGPI 60
Query: 386 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 565
+K+ RVG+K PGIIP +SVREPM+TGIKAVDSLVPIGRGQ ELII + QTGKT++AID
Sbjct: 61 GSKTHRRVGLKGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAID 120
Query: 566 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
TIINQ+ N G DEKKKLYCIYV IGQKRSTVAQ+ KRLTDA A+ YTI+
Sbjct: 121 TIINQKHLNDGTDEKKKLYCIYVVIGQKRSTVAQLAKRLTDADAMKYTIV 170
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 267 bits (654), Expect = 3e-70
Identities = 130/197 (65%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Frame = +2
Query: 167 AEXLVXFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRV 343
A +V F +GLKGMALNLE DNVGVV+FG+ I+EG V RT ++V+VPVG+ +LGRV
Sbjct: 49 AGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKGLLGRV 108
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
VD LGNPIDG+GP+ R +KAPGI+PR SV EPMQTGIKA+D+LVPIGRGQRELI
Sbjct: 109 VDGLGNPIDGRGPLTDVEYRRAEVKAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELI 168
Query: 524 IGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
IGDRQTGKTA+ IDTI+ Q+ N D KK LYCIYVA+GQKRSTVA +V+ L + GA+
Sbjct: 169 IGDRQTGKTAILIDTIVAQKPVNAEGDPKKSLYCIYVAVGQKRSTVANLVRTLIEHGAME 228
Query: 704 YTIIVSATASDAAPLQY 754
Y+I+V+ATASDAAP+QY
Sbjct: 229 YSIVVAATASDAAPMQY 245
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 231 bits (565), Expect = 2e-59
Identities = 114/193 (59%), Positives = 148/193 (76%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
LV FSSG KGMALNLE D+VG+V+ G D+ I++G V T IV+ PVG+++LGRVVDAL
Sbjct: 174 LVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQVISTNTIVNCPVGKELLGRVVDAL 233
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
GNPIDGK I + + + +KAPGI+ R + E + TGIK +DSL+PIG GQRE I+GDR
Sbjct: 234 GNPIDGKPSIISLEKREIDVKAPGIMDRKPINEQLITGIKFIDSLIPIGLGQREAIVGDR 293
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
QTGKT+L +D I+NQ++F +D K + YCIYVAIGQKRS+VAQIVK L A+ YTI+
Sbjct: 294 QTGKTSLVLDIILNQRKFY--DDIKTRKYCIYVAIGQKRSSVAQIVKILEKYDALKYTIV 351
Query: 716 VSATASDAAPLQY 754
++ATAS+AA LQ+
Sbjct: 352 IAATASNAASLQF 364
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 225 bits (551), Expect = 9e-58
Identities = 121/193 (62%), Positives = 143/193 (74%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
L+ F +G GMA+NLE D VG V+ G ++ I+EG VKRTG IV VPVGE +LGRVV+AL
Sbjct: 52 LLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAMLGRVVNAL 111
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
G PIDGKG I T V A GII R SV P+QTGIKA+DS++P+GRGQRELIIGDR
Sbjct: 112 GAPIDGKGAILTNETRPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDR 171
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
QTGKT +A+DTIINQ KG K + CIYVAIGQK STVA IV LT A++Y+I+
Sbjct: 172 QTGKTTIALDTIINQ----KG----KNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIV 223
Query: 716 VSATASDAAPLQY 754
VSATAS+ APLQY
Sbjct: 224 VSATASEMAPLQY 236
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 222 bits (543), Expect = 9e-57
Identities = 100/195 (51%), Positives = 150/195 (76%)
Frame = +2
Query: 170 EXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVD 349
+ L+ F G+ G+ALNL+ NVG V+ G+ + IKEG VKRTG ++ VPVGE +GRVV+
Sbjct: 53 QELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAFMGRVVN 112
Query: 350 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 529
LG PIDG+G I+ ++R + ++AP ++ R SV+EP+QTGIKA+D++ PIGRGQR+L+IG
Sbjct: 113 PLGQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIG 172
Query: 530 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYT 709
DR+TGKTA+ +DTI+NQ++ + D K+++ C+YVAIGQK +T+A + + L + GA++YT
Sbjct: 173 DRKTGKTAVCVDTILNQRQNWESGDPKRQVRCVYVAIGQKGTTIASVRRALEEGGAMDYT 232
Query: 710 IIVSATASDAAPLQY 754
IV+A ASD+A ++
Sbjct: 233 TIVAALASDSAGFKW 247
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 220 bits (537), Expect = 5e-56
Identities = 111/197 (56%), Positives = 143/197 (72%), Gaps = 1/197 (0%)
Frame = +2
Query: 167 AEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVV 346
A L+ F +G G+ALNLE +GVVV G+ I EG V+ TG ++ VPVGE LGRVV
Sbjct: 53 ANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVV 112
Query: 347 DALGNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
DA+GNP+DG G I + R + I+A G++ R VREP+QTG+KA+DS++PIGRGQR+LI
Sbjct: 113 DAMGNPVDGLGEIKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLI 172
Query: 524 IGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
IGDR+TGKTA+AIDTIINQ+ + D +K++ CIYVAIGQK STVA++ L AGA+
Sbjct: 173 IGDRKTGKTAIAIDTIINQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAME 232
Query: 704 YTIIVSATASDAAPLQY 754
YT IV A ASD A +Y
Sbjct: 233 YTTIVHAPASDPAGFKY 249
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 213 bits (519), Expect = 7e-54
Identities = 107/193 (55%), Positives = 144/193 (74%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
LV F++G GM NLE VG++V G+ + I+EG VKRTG +++VPVGE+++GRVV+AL
Sbjct: 15 LVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEVPVGEELIGRVVNAL 74
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
G PIDG G ++T V KAPG++ R SV EP+QTGIKA+D+LVPIGRGQRELIIGDR
Sbjct: 75 GQPIDGLGDLNTTKTRPVEAKAPGVMARKSVSEPLQTGIKAIDALVPIGRGQRELIIGDR 134
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
+TGKT++A+DTI+NQ K +D + IYVA+GQK STV + V+ L GA++YTI+
Sbjct: 135 KTGKTSIAVDTILNQ----KDQD----MIVIYVAVGQKDSTVREQVETLKKMGAMDYTIV 186
Query: 716 VSATASDAAPLQY 754
V+A ++AA L Y
Sbjct: 187 VNAGPAEAAALLY 199
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 205 bits (500), Expect = 1e-51
Identities = 97/196 (49%), Positives = 140/196 (71%)
Frame = +2
Query: 167 AEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVV 346
A L+ F G+ G+ALNL+ +G V+ G+ + I+EG VKRTG ++ VPVG+ LGRV+
Sbjct: 52 ANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAFLGRVI 111
Query: 347 DALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELII 526
+ LG PIDG G I++ + ++A ++ R V EP+QTGIKA+D++ PIGRGQR+L+I
Sbjct: 112 NPLGQPIDGLGEIESNETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVI 171
Query: 527 GDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY 706
GDR+TGKTA+ ID I+NQ+ + DEK+++ CIYVAIGQK ST+A + L + GA+ Y
Sbjct: 172 GDRKTGKTAVCIDAILNQKANWETGDEKQQVRCIYVAIGQKGSTIAGVKAALEEQGAMEY 231
Query: 707 TIIVSATASDAAPLQY 754
T IV+A ASD+A ++
Sbjct: 232 TTIVAAPASDSAGFKW 247
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 200 bits (488), Expect = 4e-50
Identities = 104/193 (53%), Positives = 136/193 (70%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
+V F +G++GMALNLE D VGVV+ G+ IKEG V RT IV+VPVG+ +LGRVVDAL
Sbjct: 53 IVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDAL 112
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
G +D KG I + APG++ R SV +P++TGI ++D++ PIG+GQRELIIGDR
Sbjct: 113 GKAVDNKGNIVANKFSVIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDR 172
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
QTGKT +AID IINQ KG + + C+YVAIGQK ST+A +V+ L GA+ YT +
Sbjct: 173 QTGKTTIAIDAIINQ----KG----RNVNCVYVAIGQKNSTIANVVRELEAHGAMEYTTV 224
Query: 716 VSATASDAAPLQY 754
V+A AS+ LQY
Sbjct: 225 VTANASELPALQY 237
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 180 bits (439), Expect = 3e-44
Identities = 89/195 (45%), Positives = 128/195 (65%)
Frame = +2
Query: 170 EXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVD 349
+ LV F L G+A N++ +GVV+ G + G V RTG ++DV VG+ +LGRV+D
Sbjct: 56 DELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGDEVDRTGRVMDVAVGDGLLGRVID 115
Query: 350 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 529
LG P+DG+GP+ + R+ + A I+ R V P+QTG+K +D+L+P+GRGQRELI+G
Sbjct: 116 PLGRPLDGRGPVASSHRLPIERPASPIMDRAPVTVPLQTGLKVIDALIPVGRGQRELILG 175
Query: 530 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYT 709
DRQTGKTA+AIDTI+NQQ N + C+Y AIGQ+ S VA++V L + GA+++T
Sbjct: 176 DRQTGKTAIAIDTILNQQGQN--------VLCVYCAIGQRASAVAKVVATLREKGAMDFT 227
Query: 710 IIVSATASDAAPLQY 754
+V +D L Y
Sbjct: 228 TVVVTEGNDPPGLAY 242
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 169 bits (410), Expect = 1e-40
Identities = 85/196 (43%), Positives = 129/196 (65%)
Frame = +2
Query: 167 AEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVV 346
A+ L+ F+SG++G+ L+LEP +GV++ G + I+ G V+RT ++ VPVG +LGRVV
Sbjct: 85 ADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGEDVRRTRKVISVPVGPALLGRVV 144
Query: 347 DALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELII 526
DA+G P DG G I + V +APG++ R ++ +P+ TGIKA+D+ VP+G GQRELII
Sbjct: 145 DAVGLPRDGLGVIAAVAEHPVEAEAPGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELII 204
Query: 527 GDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY 706
GDRQTGKT++A+DT++NQ R + CIY AIGQ+ V++++ L +
Sbjct: 205 GDRQTGKTSIAVDTMLNQIR--------SDVICIYCAIGQRGDAVSRVIGALKKGDMMAR 256
Query: 707 TIIVSATASDAAPLQY 754
+I++SA + L Y
Sbjct: 257 SIVMSAGDEETPGLAY 272
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 167 bits (407), Expect = 3e-40
Identities = 82/193 (42%), Positives = 123/193 (63%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
++ FS +KG+ +L NV +++ N + +G T I +VPVG+Q++GR++++
Sbjct: 28 MILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKCYCTNKIFEVPVGKQLIGRIINSR 87
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
G +D I + APG++ R +V EP+ TGIK++DS++PIG+GQRELIIGDR
Sbjct: 88 GETLDLLPEIKINEFSPIEKIAPGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDR 147
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
QTGKT + IDTIINQ + K + C+YV IGQK S++ I+ +L + YTII
Sbjct: 148 QTGKTTICIDTIINQ--------KNKNIICVYVCIGQKISSLINIINKLKKFNCLEYTII 199
Query: 716 VSATASDAAPLQY 754
V++TASD+A QY
Sbjct: 200 VASTASDSAAEQY 212
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 160 bits (389), Expect = 4e-38
Identities = 85/193 (44%), Positives = 117/193 (60%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
++ F G+ G A L+ D + VV+ D ++ V RTGA+++VP G Q+LGRVVD L
Sbjct: 63 VLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPL 122
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
G P+DG P+D + + AP II R V EP+ TG+ VD+L IGRGQRELIIGDR
Sbjct: 123 GRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDR 182
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
TGKT+LAID I+NQ+ + C+YVAIGQ+ S V +++ + GA +
Sbjct: 183 ATGKTSLAIDAIVNQRH--------SDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVF 234
Query: 716 VSATASDAAPLQY 754
V A A+ A LQ+
Sbjct: 235 VVAPAACAPGLQW 247
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 156 bits (378), Expect = 8e-37
Identities = 79/195 (40%), Positives = 121/195 (62%)
Frame = +2
Query: 170 EXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVD 349
+ ++ F G + L +G V+ + + G + G +DVPVGE +LGRV+D
Sbjct: 59 DDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGTPARLAGRTLDVPVGETLLGRVID 118
Query: 350 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 529
+GNP+DG P++T++R + +P II R V++P+ TG + VD+LVPIG+GQR+LIIG
Sbjct: 119 PIGNPLDGGRPLETRNRRPLDSPSPPIIARDFVQQPLYTGTRLVDTLVPIGKGQRQLIIG 178
Query: 530 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYT 709
D TG+++LAID ++NQ KG +++ C+YV IGQKRSTV ++ L + GA+ YT
Sbjct: 179 DEGTGRSSLAIDAVLNQ----KG----REVRCVYVLIGQKRSTVVGTIELLRNYGALAYT 230
Query: 710 IIVSATASDAAPLQY 754
+V A L+Y
Sbjct: 231 TVVVGEAGSLPGLKY 245
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 155 bits (376), Expect = 1e-36
Identities = 107/229 (46%), Positives = 133/229 (58%)
Frame = +2
Query: 68 LGAAPKAALVSSWSCLATXXXXXXXFXAXSXXQAEXLVXFSSGLKGMALNLEPDNVGVVV 247
LGA A L + C+ + QAE +V FSS LK M LNLE D + VV
Sbjct: 60 LGANTSADLEDT-GCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLNLEADML--VV 115
Query: 248 FGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG 427
+ KEG VKRTGAI+DV VG+++LGRVV A+G D+K +VG+K
Sbjct: 116 LHLEMNTKEGDTVKRTGAIMDVLVGKKLLGRVVGAIG---------DSKDHRQVGLKVLR 166
Query: 428 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 607
I +SV+EPM+TGIKAVDSLVPIG GQ E+ F+ G DE
Sbjct: 167 ITLPISVQEPMETGIKAVDSLVPIGPGQHEIC---------------------FSDGSDE 205
Query: 608 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 754
+KKLY IY+A+GQKRSTV Q+ KRLTDA A I+VS TA+DAAP +Y
Sbjct: 206 RKKLYYIYIAVGQKRSTVGQL-KRLTDANATKCPIVVSTTATDAAPHRY 253
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 153 bits (371), Expect = 6e-36
Identities = 81/192 (42%), Positives = 124/192 (64%), Gaps = 8/192 (4%)
Frame = +2
Query: 203 GMALNLEPDN-VGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPID--- 370
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ LG+ +
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGL 139
Query: 371 ---GKGPIDTKSRM-RVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 538
+ ++++ + +V AP I+ R V + TG KAVD+++PIGRGQRELI+GDRQ
Sbjct: 140 LTRSRALLESEQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQ 199
Query: 539 TGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 718
TGKT++A+ TIINQ R N+ K + IYV+IGQ+ S VA+I + L GA+ YT ++
Sbjct: 200 TGKTSIAVSTIINQVRSNQQILSKNAVISIYVSIGQRCSNVARIHRLLRSYGALRYTTVM 259
Query: 719 SATASDAAPLQY 754
+ATA++ A LQY
Sbjct: 260 AATAAEPAGLQY 271
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 147 bits (357), Expect = 3e-34
Identities = 100/237 (42%), Positives = 135/237 (56%), Gaps = 51/237 (21%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPID-- 370
++GM + +E D + V++FG+++ +K G V+ G IV + VG +LGRV+D LGN +D
Sbjct: 96 VEGMVVGIEQDYISVIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLDDP 155
Query: 371 ------GKGPIDTKSR------------MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 496
K P D R V I+APGII R SV +P+ TG+ VDS+VP
Sbjct: 156 TRPVELNKSPKDDLFRNYYIGRIVTGYSRPVEIQAPGIIVRKSVNKPLLTGLNCVDSMVP 215
Query: 497 IGRGQRELIIGDRQTGKTALAIDTIINQQRFNK----------GEDEKKKL-----YCIY 631
IG GQRELIIGDRQ GKTA+AID I+NQ N+ G K L YCIY
Sbjct: 216 IGLGQRELIIGDRQVGKTAVAIDMILNQAFLNETLRNSLLSSEGAVVNKLLPSKPCYCIY 275
Query: 632 VAIGQKRSTVAQI----------------VKRLTDAGAINYTIIVSATASDAAPLQY 754
V IGQK+ST+A+I KR + A+NYTIIV++ +SD+AP+Q+
Sbjct: 276 VGIGQKQSTIARIAKLLKRPRTLFERNVSTKRSSVFSALNYTIIVASISSDSAPIQF 332
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 140 bits (338), Expect = 6e-32
Identities = 78/193 (40%), Positives = 115/193 (59%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
L+ F SG +G++ +L D++ VV+ I+ G +T I V E +LGRV+ AL
Sbjct: 52 LILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGDTAYKTDRIASVNATEGLLGRVLGAL 111
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
GNPID + V AP ++ R + EP+ TGIK +DS++ IG+GQRELIIGD
Sbjct: 112 GNPIDNGPELKECLSCPVERDAPSLLQRDFITEPLYTGIKVIDSMLAIGKGQRELIIGDP 171
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
TGK+++AIDT+INQ + ++ IYV IGQK+S V +I++ + G + TI
Sbjct: 172 STGKSSIAIDTVINQ--------KNSRVISIYVVIGQKKSHVLKIIEEIKKYGDFSRTIF 223
Query: 716 VSATASDAAPLQY 754
V A AS++ LQ+
Sbjct: 224 VIADASNSLGLQF 236
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 127 bits (306), Expect = 4e-28
Identities = 67/185 (36%), Positives = 106/185 (57%)
Frame = +2
Query: 200 KGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 379
+G+ L L + VG+ + I EG V T ++V + E + GR++D G +
Sbjct: 55 RGVILELNEEFVGIGLIDKTNDILEGMSVSVTDHFIEVNLFEDMAGRIIDTTGKMLYDVS 114
Query: 380 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 559
+ + P I+ SV P+ TG+ +DS+ PIGRGQR+LI+G+RQ+GKT +A
Sbjct: 115 DEQPTASSPLFCVTPAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIA 174
Query: 560 IDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDA 739
+DTIINQ N ++CIYVAIG K + +A++++ L GA++Y+ +V+ ASD+
Sbjct: 175 VDTIINQHNQN--------VHCIYVAIGLKAAYIAEVIETLRKHGAMDYSTVVATAASDS 226
Query: 740 APLQY 754
QY
Sbjct: 227 LTAQY 231
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 123 bits (297), Expect = 6e-27
Identities = 84/212 (39%), Positives = 110/212 (51%), Gaps = 24/212 (11%)
Frame = +2
Query: 191 SGLKGMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPI 367
S L G LNLE V +V+ G +K +V RT V G +LGRVV LG
Sbjct: 44 SNLLGQVLNLEKSQVRIVMINGQQSHLKSNDLVYRTYKDVKTKAGYGVLGRVVSPLGECY 103
Query: 368 DGKG---------PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQREL 520
+ + I + V I APGII R VR P TGI VD L+P+G GQREL
Sbjct: 104 NEEDFDELSYLFDDISLIEDVSVEIPAPGIIEREPVRVPFLTGINVVDCLIPVGCGQREL 163
Query: 521 IIGDRQTGKTALAIDTIINQQRFNKGEDEKKK--------------LYCIYVAIGQKRST 658
IIGD+ TGKT+LAI ++NQ+ N +K + + CIYV +G +RS
Sbjct: 164 IIGDQNTGKTSLAISAVLNQRLVNNVIHKKWRALESEIKIDRHSNFITCIYVTVGTRRSE 223
Query: 659 VAQIVKRLTDAGAINYTIIVSATASDAAPLQY 754
A++ K L GA+NYT +V + A AA LQ+
Sbjct: 224 GARLKKILDKMGALNYTSMVFSHADQAAALQF 255
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 107 bits (257), Expect = 4e-22
Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPI--D 370
LKG A E VG+V + ++ G TG + V + + ++G VVD N +
Sbjct: 40 LKGSAFQAE---VGLVNVDSHNQLEVGSEAIATGELFKVKIHDNLIGSVVDVSLNEVLTF 96
Query: 371 GKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 550
K D + + V +A I R +V P++TGI A+D+++PIGRGQ++LIIGD+ TGKT
Sbjct: 97 SKRGQDDIAILDVFEEAKPIYSRKAVNAPLETGITAIDAVLPIGRGQKQLIIGDKGTGKT 156
Query: 551 ALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATA 730
A+A++ I+ Q EK + IY A+G+KR V +I L ++ TII+S++A
Sbjct: 157 AIALNAILAQ--------EKSNVISIYAAVGKKREEVVEIFSVLKSRKLMDKTIIISSSA 208
Query: 731 SDAAPLQYAL 760
D A +Y L
Sbjct: 209 DDLAVTKYLL 218
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 104 bits (249), Expect = 4e-21
Identities = 60/186 (32%), Positives = 95/186 (51%)
Frame = -2
Query: 751 LQGSSIGSGGRHDDCVVDGTSISQSLHNLSYSRPLLSNGNINAXXXXXXXXXXXXXXXVD 572
L + GG DD V G + Q LH L + R LL++G+++A V+
Sbjct: 329 LHRRGVRGGGGDDDGVFQGALVLQHLHELGHRRALLADGDVDAVELGVLVRAGMGRLLVE 388
Query: 571 DRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTGF 392
+ + G L L V +DQL L A+ Q V+ L+ HRL HR +D RL+ D T
Sbjct: 389 NGVERDGGLAGLAVADDQLALAAADRDQGVDRLEAGGHRLMHRLARDDARRLHVDAATLG 448
Query: 391 RVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQVK 212
R+D +LA++RV +++ + + L+D +V+D LD +FL+ V + + IV +V+
Sbjct: 449 RLDRALAVDRVAEAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADIVLLEVE 508
Query: 211 GHXLEA 194
GH A
Sbjct: 509 GHAAHA 514
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 103 bits (247), Expect = 6e-21
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILG 337
QAE +V FSSGLKGM+LNLEPDNVGVVVFGNDKLIKEG IVKRTG IVDVPVG+ +LG
Sbjct: 91 QAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGXIVDVPVGKDLLG 148
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized protein
- Dinoroseobacter shibae DFL 12
Length = 950
Score = 101 bits (241), Expect = 3e-20
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Frame = -2
Query: 736 IGSGGRHDDCVVDGTSISQSLHNLSYSRPLLSNGNINAXXXXXXXXXXXXXXXV--DDRI 563
+G GG HDD V DGTS + L L + LL +G+++A + DR+
Sbjct: 579 VGGGGGHDDGVFDGTSFFELLDQLRHGGALLPHGHVDAVELLALVVAGGVVIGLLVQDRV 638
Query: 562 NGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTGFRVD 383
G L L V +DQL L + V+ HRL H +D RL+ +D
Sbjct: 639 ERHGGLAGLAVADDQLALAAPDRDHGVDRFQAGRHRLMHGFARDDARRLHVRDAALGGLD 698
Query: 382 WSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQVKGHX 203
+LA+ RV Q+I+ + ++ G+V+D LD+ +FLD V + + THIV F+V+GH
Sbjct: 699 RALAVQRVAQAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQGHP 758
Query: 202 LEA 194
+A
Sbjct: 759 ADA 761
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 100 bits (239), Expect = 6e-20
Identities = 51/112 (45%), Positives = 74/112 (66%)
Frame = +2
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
AP I+ R SV EP+ TGI ++D+++PIGRGQRELIIGDRQTGKT++ +DTI+N
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVNL------ 161
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 754
+ +K+ +YV +GQK ++V ++L IV A+AS +A +QY
Sbjct: 162 --KYEKVLSVYVPVGQKAASVLDAYQQLVKRDVYQALAIVMASASTSAVMQY 211
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 98.7 bits (235), Expect = 2e-19
Identities = 61/174 (35%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Frame = +2
Query: 260 KLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGN---PIDGKGPIDTKSRM----RVGIK 418
K+ E +V+ +G I ++ G+++D G+ PI+ ID ++ K
Sbjct: 57 KINDELDLVENSGKISTY---QKFYGKIIDIFGHIKYPIEANDIIDENEEKIGTGKIFNK 113
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
A G++ R S+ EP+QTGI ++D L+P+G+GQRELIIGDR+TGKT++A++TII+Q+ N
Sbjct: 114 ALGMMFRKSLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTN-- 171
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYAL 760
+YVAIGQ+++ + I L + + TII+ A++ + +AL
Sbjct: 172 ------TKAVYVAIGQRKTNINFIYNTLEEFDVLKNTIILEASSENLYHQFFAL 219
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 98.3 bits (234), Expect = 2e-19
Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Frame = +2
Query: 308 DVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK----APGIIPRVSVREPMQTGIK 475
+V ++ G+V+D GN I K V + A ++ + E + TGI
Sbjct: 90 EVFTSKEHFGKVIDIYGNAILPVAQAIQKDDSAVSSEIFKLAHDLMKVQRLNEQLYTGIN 149
Query: 476 AVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRS 655
A+D L+PIG+GQRELIIGDRQTGKT +A++ IINQ K CIYVAIGQKR
Sbjct: 150 AIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQ--------AAKGTKCIYVAIGQKRE 201
Query: 656 TVAQIVKRLTDAGAINYTIIVSATASDA 739
++++I L A+ TII+ A A+ A
Sbjct: 202 SISRIYNTLNQHNALKNTIIIDAPANSA 229
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 97.9 bits (233), Expect = 3e-19
Identities = 62/187 (33%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGN---PI 367
+K + L+ E + ++V + I+ G + A ++ Q G+VV+ G P+
Sbjct: 37 VKALVLSAEINRAFLLVDTSKVPIEIGDELIVKPAYNEIQTSRQFFGKVVNIDGEIVYPV 96
Query: 368 DGKGPIDTKSRMRVG---IKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 538
+ + +R G + G++ R + E + TGI ++D PIGRGQRE+I+GD+Q
Sbjct: 97 TQNKTVVYEPNLRKGNIFFQPVGMLERQHLSEQLYTGILSIDLFNPIGRGQREIIVGDKQ 156
Query: 539 TGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 718
TGKT +A++TIINQ+ N G + CIYV+IGQ ++ + L +A A++YTII
Sbjct: 157 TGKTHIALNTIINQR--NSG------VKCIYVSIGQNNKNLSNVYTTLKNANALDYTIIF 208
Query: 719 SATASDA 739
A++ +A
Sbjct: 209 EASSENA 215
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 93.1 bits (221), Expect = 9e-18
Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 7/155 (4%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGN--PIDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQ----TG 469
V + G+++D N P K ++ KS+ + P P+ + +P++ TG
Sbjct: 77 VATSREFFGKIIDIQNNIYPHKAKASLN-KSKYYSSLSTPFNNPKELLNYQPLKKQLLTG 135
Query: 470 IKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQK 649
VD L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+ N+G + CIYVAIGQ+
Sbjct: 136 YVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK--NQG------VKCIYVAIGQQ 187
Query: 650 RSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 754
+ + + L + GA+++TII++A A D+ QY
Sbjct: 188 HAQLTSTYQLLKENGALDHTIIINAPA-DSPYEQY 221
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 92.3 bits (219), Expect = 2e-17
Identities = 61/197 (30%), Positives = 91/197 (46%)
Frame = -2
Query: 754 VLQGSSIGSGGRHDDCVVDGTSISQSLHNLSYSRPLLSNGNINAXXXXXXXXXXXXXXXV 575
VLQ SS+GSG +D V+ I Q LH L LL++ N++A V
Sbjct: 162 VLQRSSVGSGRGDNDGVIQRAGIFQGLHELGNGGALLADCNVDAIQLGVFIVGSVQRLLV 221
Query: 574 DDRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTG 395
+ + T LTVT+DQL LT AN Q V+ HRL H + L+
Sbjct: 222 QEGVENDRGFTGLTVTDDQLALTAANRDQGVDGFQAGGHRLVHGLARQNAGCLDVHAALF 281
Query: 394 FRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQV 215
+D + A++RV + + + L+D + +D LD +F + V + T++V FQV
Sbjct: 282 GGLDRAFAVDRVAERVDDAAQKALADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQV 341
Query: 214 KGHXLEA*GEXHQXLSL 164
+GH L+ E SL
Sbjct: 342 QGHALDTTREFDHFTSL 358
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 89.4 bits (212), Expect = 1e-16
Identities = 58/193 (30%), Positives = 97/193 (50%)
Frame = +2
Query: 176 LVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDAL 355
+V F SG +GM ++ + +V+ + G + I VGE ++GR+V L
Sbjct: 60 MVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTLAVLQDNIPTTRVGEGLIGRIVTPL 118
Query: 356 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
P+D KG + + +AP I+ R + E + +G+ AVD+L PI GQR I+GD
Sbjct: 119 CRPLDDKGTVRLDDTRPLFYEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQRIAILGDT 178
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
+ GK+ T + Q N+ + + +YV IG++R + ++V L GAI ++I+
Sbjct: 179 KAGKS-----TFLGQLGVNQIDTGR---IVVYVLIGKRRVEIDRLVATLNQTGAIKHSIV 230
Query: 716 VSATASDAAPLQY 754
V A D+ Y
Sbjct: 231 VVANIFDSIAQSY 243
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 88.2 bits (209), Expect = 3e-16
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +2
Query: 326 QILGRVVDALGNPIDGKGPIDT---KSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 496
+ G+++D GN I+ + T + R A G++ R + + TGI A+D P
Sbjct: 78 EYFGKIIDLSGNIIEPRAARPTTFLQYRHSAFETAAGVLRRELIDRQIYTGIYAIDLFNP 137
Query: 497 IGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVK 676
IG GQRELI+GDRQTGKT + I+TIINQ+ + + CIYV+IGQKR + +
Sbjct: 138 IGFGQRELIVGDRQTGKTHIGINTIINQK-------DSRTTKCIYVSIGQKRQNLVSLYH 190
Query: 677 RLTDAGAINYTIIVSATAS 733
L A+ TI++ A ++
Sbjct: 191 DLVQNEAMANTIVLHAPST 209
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 85.8 bits (203), Expect = 1e-15
Identities = 58/187 (31%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+KG L+++ +++ G+ IK G + + + G+++D G + +
Sbjct: 36 VKGFCLSVDEKRTFLLIDGDTSKIKVGTEIIPLESRFIAKTYKDYFGKIIDIDGKVLYSE 95
Query: 377 GP---IDTKS--RMRVGIK-APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 538
I K+ K A GI RV + EP++TGI ++D L+PIG+GQR+LI+GD +
Sbjct: 96 SEDQEISEKAYENENSAFKVASGIQDRVKLNEPLETGIFSIDILLPIGKGQRQLILGDSK 155
Query: 539 TGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 718
TGKT++A+ T+INQ K D K IYV+IG K + + +I K + + + TI++
Sbjct: 156 TGKTSIALSTMINQ----KENDIK----IIYVSIGLKSNDLKRIYKTIVEQKIAHKTILM 207
Query: 719 SATASDA 739
A++ ++
Sbjct: 208 HASSDNS 214
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 85.4 bits (202), Expect = 2e-15
Identities = 55/177 (31%), Positives = 88/177 (49%)
Frame = +2
Query: 212 LNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 391
+ + + V ++ GN + I G V TG + V VG+ +LGRV+D LGNPIDGKGP+
Sbjct: 61 VGFKEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPLKY 120
Query: 392 KSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 571
+ + V P + R +RE M GIKA+D L+ G+GQR I GK+ T+
Sbjct: 121 EKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKS-----TL 175
Query: 572 INQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAA 742
+ N D + IG++ V + +++ + +++V AT+ A
Sbjct: 176 LGMMARNAKADLN-----VIALIGERGREVNEFIEKDLGEEGLKRSVVVVATSDTPA 227
>UniRef50_A4EBH1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 492
Score = 83.4 bits (197), Expect = 7e-15
Identities = 58/182 (31%), Positives = 94/182 (51%)
Frame = -2
Query: 754 VLQGSSIGSGGRHDDCVVDGTSISQSLHNLSYSRPLLSNGNINAXXXXXXXXXXXXXXXV 575
VL IGS GR+DD VV+ T +S+ L ++ LL++GNI+A
Sbjct: 281 VLHRGGIGSSGRNDDGVVERTVLSEGLADVGNRGGLLADGNIDADHALAALI-------- 332
Query: 574 DDRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTG 395
+D ++G G LT LTV +D+LTLT A+ + V+S T L+RL HR +D L D T
Sbjct: 333 EDSVDGDGGLTGLTVADDELTLTAADRHHGVDSEQTGLNRLAHRGTIDDAGSLELDGATV 392
Query: 394 FRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQV 215
D + A++ + + I + + G+++++ S +FLD + T+ +V +V
Sbjct: 393 RSDDVAQAVDGLAERIDDAAEHGTAHGDIHNAASGAALVAFLDGVDGTEQNGADLVTVKV 452
Query: 214 KG 209
G
Sbjct: 453 LG 454
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 83.0 bits (196), Expect = 1e-14
Identities = 48/164 (29%), Positives = 83/164 (50%)
Frame = +2
Query: 239 VVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 418
+ + G + L++ G V +GA + +PVG + LGR+++ +G PID +GPI TK + +
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
AP + +E + TGIK VD L P +G + + G GKT L ++ I N + + G
Sbjct: 170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATA 730
Y ++ +G++ + + ++G IN S A
Sbjct: 230 -------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVA 266
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 82.6 bits (195), Expect = 1e-14
Identities = 46/166 (27%), Positives = 80/166 (48%)
Frame = +2
Query: 206 MALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 385
+A +L + V + + + G V TG + VPVG + LGR+++ +G PID +GPI
Sbjct: 83 VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI 142
Query: 386 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 565
+K R + P + + E ++TGIK VD L P RG + + G GKT +
Sbjct: 143 KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQE 202
Query: 566 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
I N + + G + ++ +G++ + + + + G IN
Sbjct: 203 LINNIAKAHGG-------FSVFTGVGERTREGNDLYREMKETGVIN 241
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 81.8 bits (193), Expect = 2e-14
Identities = 46/154 (29%), Positives = 81/154 (52%)
Frame = +2
Query: 239 VVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 418
+ + G + L++ G V TGA + VPVG LGR+++ LG PID +G I T+ + +
Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 197
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
AP ++ + +E + TGIK VD L P RG + + G GKT L ++ I N + + G
Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAI 700
+ ++ +G++ + + + ++G I
Sbjct: 258 -------FSVFAGVGERTREGNDLYREMIESGVI 284
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 81.0 bits (191), Expect = 4e-14
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Frame = -2
Query: 751 LQGSSIGSGGRHDDCVVDGTSISQSLHNLSYSRPLLSNGNINAXXXXXXXXXXXXXXXVD 572
LQ S G H D V G Q +++ LL++ NINA D
Sbjct: 314 LQCGGFRSTGNHHDGVGQGAVFFQLANDVGNGGTLLADSNINAENTGVFLV--------D 365
Query: 571 DRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTGF 392
D ++G G L LTVT+DQLTL TA+ V+ L SL+RL +R + W N G
Sbjct: 366 DGVDGHGGLADLTVTDDQLTLATADRDHGVDGLVASLYRLVYRLTPDHAWS-NFLDRVGL 424
Query: 391 RV-DWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQV 215
V + A++RV Q + + L++ N+ D+ L +F + ++ T+ + T+ V QV
Sbjct: 425 GVAQRTFAVDRVAQCVDDATQQFLTNRNLQDAAGALGAHAFGEGVIGTQDHCTYGVLLQV 484
Query: 214 KGHXLEA 194
+GH ++A
Sbjct: 485 QGHAVDA 491
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 81.0 bits (191), Expect = 4e-14
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Frame = +2
Query: 314 PVGEQILGRVVDALGNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 490
P GR V+A G + G+ + T R+ + P + R + P+ TG+KAVD L
Sbjct: 148 PSARWAAGRTVNAFGECLKGERMVTGTDDSSRMMREPPTVEDRKPITTPLVTGVKAVDVL 207
Query: 491 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 670
P+GRGQ L+ G+ TG + L + TI Q +K + C+Y A+G + S V ++
Sbjct: 208 APLGRGQCMLVSGEPGTGLSELCLTTIAAQ--------KKTGVRCVYAALGAQASRVEEV 259
Query: 671 VKRLTDAGAINYTIIVSATASDAAPLQYA 757
KRL GA+ YT IV+ + +YA
Sbjct: 260 EKRLEQDGAMEYTTIVTVDKEASEGERYA 288
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 81.0 bits (191), Expect = 4e-14
Identities = 43/163 (26%), Positives = 84/163 (51%)
Frame = +2
Query: 206 MALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 385
+A +L ++V + + + + G V TG + VPVG++ LGR+++ +G P+D GP+
Sbjct: 75 VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL 134
Query: 386 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 565
T +R + +AP + + + + + TGIK VD L P +G + + G GKT L ++
Sbjct: 135 KTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIME 194
Query: 566 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAG 694
I N + + G Y ++ +G++ + + ++G
Sbjct: 195 LINNVAKAHGG-------YSVFAGVGERTREGNDLYHEMIESG 230
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 77.8 bits (183), Expect = 4e-13
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +2
Query: 311 VPV-GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDS 487
+PV G Q+LGRV+DALG P DG GP+ T+ V + P + R +RE + TG++A+D+
Sbjct: 109 IPVSGAQLLGRVLDALGRPFDGAGPVPTRRVDAVHSRPPHPLRRQRIREALPTGVRALDA 168
Query: 488 LVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQ 667
P+GRGQR + GK+ T++ D + +G++ V +
Sbjct: 169 FTPLGRGQRLGLFAGSGVGKS-----TLLGMIARGSAAD-----VVVIGLVGERGREVRE 218
Query: 668 IVKRLTDAGAINYTIIVSATASDAAPLQ 751
+++ A + +++V AT+ APL+
Sbjct: 219 FLEKDLGAEGLARSVVVVATSDSPAPLR 246
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 74.5 bits (175), Expect = 3e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Frame = +2
Query: 227 DNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 406
D + ++ G ++ G V TG + PVG +LGRV+D LGNPID KGP+
Sbjct: 62 DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPLMGCGFRP 121
Query: 407 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ AP + R + P+ G++A+D+L+ +G GQR I GK+ L
Sbjct: 122 ILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTL 171
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 74.1 bits (174), Expect = 4e-12
Identities = 44/160 (27%), Positives = 79/160 (49%)
Frame = +2
Query: 239 VVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 418
V + D L++ G V+ TG + PVG +LGR+ + +G PID +G + +
Sbjct: 60 VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRP 118
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
AP + + + E ++TG+K +D L P +G + G GKT L ++ I N + G
Sbjct: 119 APSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAIEHHG 178
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 718
+ I+ +G++ + +T+AG +N T++V
Sbjct: 179 -------FSIFAGVGERTREGNDLYLEMTEAGVLNNTVLV 211
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 73.7 bits (173), Expect = 6e-12
Identities = 43/148 (29%), Positives = 74/148 (50%)
Frame = +2
Query: 257 DKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 436
D L++ G V TG+ + VPVG + LGR+++ +G P+D +GPI +K M + AP
Sbjct: 67 DGLVR-GQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTE 125
Query: 437 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 616
+ + + TGIK +D L P +G + + G GKT L + I N + + G
Sbjct: 126 QSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGG------ 179
Query: 617 LYCIYVAIGQKRSTVAQIVKRLTDAGAI 700
+ ++ +G++ + +AG I
Sbjct: 180 -FSVFAGVGERTREGNDLYHEFLEAGVI 206
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 73.3 bits (172), Expect = 8e-12
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +2
Query: 212 LNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVP--VGEQILGRVVDALGNPIDGKGPI 385
LN +PD V+ D+ K I++ + + + V I G + PI PI
Sbjct: 195 LNQQPDCA--VILNADR--KSSVILEAARSQIPIAFLVDSTIPGESHKRITYPIPANDPI 250
Query: 386 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT 541
R + GI+ R SV EPMQTG+KAVDSLVPIGRG+RELIIG R+T
Sbjct: 251 QFVYLFRHSVTKTGILERKSVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 72.9 bits (171), Expect = 1e-11
Identities = 34/88 (38%), Positives = 55/88 (62%)
Frame = +2
Query: 293 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 472
+G + +PVG+++LGRV++ +G PID KG I TK + P + R +R+ + TG+
Sbjct: 97 SGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITKEERPPDNEVPNPLDRPIIRDVLMTGV 156
Query: 473 KAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+A+D ++ IGRGQR I GK++L
Sbjct: 157 RAIDGILTIGRGQRVGIFSGSGVGKSSL 184
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 72.9 bits (171), Expect = 1e-11
Identities = 56/192 (29%), Positives = 88/192 (45%)
Frame = -2
Query: 751 LQGSSIGSGGRHDDCVVDGTSISQSLHNLSYSRPLLSNGNINAXXXXXXXXXXXXXXXVD 572
LQ +G G DD V+ G + Q +NL LL++ +++A D
Sbjct: 278 LQRRRLGGGCGDDDGVIHGAVLFQLGNNLGDRGALLADCDVDADHVAALLV--------D 329
Query: 571 DRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTGF 392
D ++ G L LTV +DQL L+ + V+ L+ LHRL HR +DT L+ G
Sbjct: 330 DGVDRYGGLAGLTVADDQLALSAPDRNHGVDRLEAGLHRLMHRLTLDDTGGLHFHLAEGV 389
Query: 391 RVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQVK 212
VD + AI+RVT + + + N+ D D +FLD + + +V +V+
Sbjct: 390 GVDRAEAIDRVTDRVDHAADQGRAYRNLDDLAGQFDRVAFLDLGELAEDRRADVVFLEVQ 449
Query: 211 GHXLEA*GEXHQ 176
H +A GE +
Sbjct: 450 NHAGDAAGELEE 461
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 72.9 bits (171), Expect = 1e-11
Identities = 52/161 (32%), Positives = 78/161 (48%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 445
++ G V GA + VPVG+ +LGRV++A G IDGKG I R V + + R+
Sbjct: 80 VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEVLRASSNPMERLP 139
Query: 446 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 625
+ M TG++ +DSL+ +G GQR I GK+ T++ N D
Sbjct: 140 ITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKS-----TLMGMIARNTDAD-----VS 189
Query: 626 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
+ IG++ V V + ++IVSAT SD +PL
Sbjct: 190 VIALIGERGREVMDFVAHDLGPEGLKRSVIVSAT-SDESPL 229
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 72.5 bits (170), Expect = 1e-11
Identities = 45/148 (30%), Positives = 74/148 (50%)
Frame = +2
Query: 257 DKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 436
D L++ G V+ TG + VPVG LGR+++ +G PID +GPI ++ R + AP
Sbjct: 73 DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPIHRPAPSFEE 131
Query: 437 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 616
+ + E + TGIK VD L P +G + + G GKT + + I N + + G
Sbjct: 132 QAAASEILVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELINNIAKAHGG------ 185
Query: 617 LYCIYVAIGQKRSTVAQIVKRLTDAGAI 700
++ +G++ + + DAG I
Sbjct: 186 -VSVFAGVGERTREGNDLYFEMQDAGVI 212
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 72.1 bits (169), Expect = 2e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Frame = +2
Query: 275 GXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 454
G V+ + + VG+ + GRV+DA G PIDGK D R+ AP + R + E
Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDE 152
Query: 455 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 634
P+QTG++A+D+++ G GQR I GK+ L +G + +
Sbjct: 153 PLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLL-------GMLTRGTTADR---IVIA 202
Query: 635 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAA 742
+G++ V + ++R A + +++V AT+ A
Sbjct: 203 MVGERGREVQEFMQRALGAAGLKRSVVVVATSDKPA 238
>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 67
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = -3
Query: 483 STALIPVCIGSRTDTRGMIPGALIPTLIRDFVSIGPLPSIGLPKASTTRPRICSPTGTST 304
S A+IPVC+GS+TD R +IPGA V I P PSIG P+ STTRP I SPTGT
Sbjct: 3 SIAVIPVCMGSQTDLRAIIPGAGDSIKRLSDVLISPFPSIGRPRESTTRPTIASPTGTWA 62
Query: 303 IAPV 292
I PV
Sbjct: 63 IFPV 66
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 71.3 bits (167), Expect = 3e-11
Identities = 48/153 (31%), Positives = 75/153 (49%)
Frame = +2
Query: 284 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 463
V TG + +VP+G +LGRV+D+ P+DGKG + T + +AP + R V P
Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFP 159
Query: 464 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIG 643
G++A+D L+ G GQR I G+ GK+ T+I+Q D I IG
Sbjct: 160 LGVRALDGLLTCGEGQRIGIYGEPGGGKS-----TLISQIVKGAAAD-----VVIVALIG 209
Query: 644 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAA 742
++ V + V+R + I+V T+ +A
Sbjct: 210 ERGREVREFVERHLGEEGLRRAIVVVETSDRSA 242
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 70.9 bits (166), Expect = 4e-11
Identities = 46/144 (31%), Positives = 73/144 (50%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 490
+P+ +LGRV+D GNP+DG P+ + P + R ++E TGI+A+D+L
Sbjct: 92 LPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDAL 151
Query: 491 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 670
+ IG GQR I + GK++L + TI KG + + + IG++ V
Sbjct: 152 LTIGEGQRVGIFSEPGGGKSSL-LSTIA------KGSQQTINVIAL---IGERGREVRDY 201
Query: 671 VKRLTDAGAINYTIIVSATASDAA 742
V + + A TIIV +TA + A
Sbjct: 202 VNQHKEGLAAQRTIIVVSTAHETA 225
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 70.5 bits (165), Expect = 5e-11
Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Frame = +2
Query: 218 LEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 397
+ D V ++ + + G +V T ++VPVG+ + +V D LGN ++ K K+
Sbjct: 45 ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLNDKS---AKN 101
Query: 398 RMRVGIKAPGIIPR-VSVR-EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 571
++V I + + + ++ E ++TGIKA+D +PI RG + I+G GKT + + I
Sbjct: 102 LLKVEIDSTITKSKNLEIKNEILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEII 161
Query: 572 INQQRFN--KGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDA 739
N +F + + EKK I++ G++ ++ L ++ ++ T++ + ++A
Sbjct: 162 FNASKFKAPQAQKEKKNTSSIFIGSGERSREGLELYDELKNSKLLDKTVMFISQMNEA 219
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 70.5 bits (165), Expect = 5e-11
Identities = 41/160 (25%), Positives = 78/160 (48%)
Frame = +2
Query: 227 DNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 406
+ V V + ++ G V TG + +PVGEQI GR+++ +G+ IDG ++
Sbjct: 57 NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYS 116
Query: 407 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 586
+ P +V+E + TGIK +D L P +G + + G GKT L ++ I N +
Sbjct: 117 IHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAK 176
Query: 587 FNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY 706
+ G + ++ +G++ +++ + ++G I Y
Sbjct: 177 KHNG-------FSVFAGVGERTREGNDLLREMIESGVIRY 209
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 70.1 bits (164), Expect = 7e-11
Identities = 48/146 (32%), Positives = 70/146 (47%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 490
+ VG++ILGRV+DA G P+DG P + V AP R+ VRE M GI+A+D
Sbjct: 94 IAVGDEILGRVLDATGAPLDGITPARPRGSRPVDGSAPLPYARIPVREVMPCGIRAIDGF 153
Query: 491 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 670
V GRGQR I G GK+ T+I D + IG++ V +
Sbjct: 154 VTCGRGQRIGIFGGSGVGKS-----TLIGMLTRGSAAD-----VTVLALIGERGREVREF 203
Query: 671 VKRLTDAGAINYTIIVSATASDAAPL 748
V+ + +++ +T SD +PL
Sbjct: 204 VEESIGEEGMQRAVVIVST-SDQSPL 228
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 70.1 bits (164), Expect = 7e-11
Identities = 40/121 (33%), Positives = 64/121 (52%)
Frame = -2
Query: 574 DDRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTG 395
DDR+ L +LTV +DQLTL TA+ + RV+ LD LHRL HR + D
Sbjct: 1338 DDRVERHRGLAALTVADDQLTLATADRHHRVDRLDARLHRLRHRLTPDHARGDLFDRVGQ 1397
Query: 394 FRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQV 215
RVD +LA++RV + + + + +D + ++ LD+ +F D V + + V +V
Sbjct: 1398 LRVDRALAVDRVAERVDHAADEFRADRDFENAARRLDDVAFRDVFVFAENHRADRVALEV 1457
Query: 214 K 212
+
Sbjct: 1458 Q 1458
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 69.7 bits (163), Expect = 1e-10
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +2
Query: 251 GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS-RMRVGIKAPG 427
G K I +G V +G + VGE +LGRV++ LG P+DG GP+ ++ V + P
Sbjct: 77 GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPVDNRPPN 136
Query: 428 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ R + E + TG++AVD L+ GRGQR I GK+ L
Sbjct: 137 PLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL 179
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 68.9 bits (161), Expect = 2e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = +2
Query: 239 VVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 418
V+ F +K + G V+ GA VPVG+ +LGR++DA GNP+DG+ I ++ + + +
Sbjct: 74 VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGRPAIKSQFQWPLAGR 133
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ R V + G++A++ L+ +G GQR II GK+ L
Sbjct: 134 KVNPLRRGRVTRALNMGVRAINGLLTVGEGQRVAIIAGSGVGKSVL 179
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 68.9 bits (161), Expect = 2e-10
Identities = 53/169 (31%), Positives = 82/169 (48%)
Frame = +2
Query: 239 VVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 418
+++ G+ +L++ V+ G+ V VG+ +LGR VD LG PIDG I + K
Sbjct: 72 MMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDGGPAIHASETWPLLGK 131
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
+ R V E G++AV++L +G GQR II GK+ L IDT+
Sbjct: 132 RESALARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVL-IDTV--------A 182
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 745
+ K L + IG++ V+ V R +GA ++V A +D AP
Sbjct: 183 ANAKADL-AVIALIGERAREVSDFVTRHM-SGAERGRMVVVAVPADHAP 229
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 66.9 bits (156), Expect = 7e-10
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Frame = +2
Query: 215 NLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI--D 388
+L+ V + + G + + G + VPVGE +LGR++D +G + KGP D
Sbjct: 50 HLDARRVRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLD-VGGVVGDKGPPLPD 108
Query: 389 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 568
R + P + + + EP TGIK +D L P+ +G + + G GKT L ++
Sbjct: 109 DVPRRPIHRSPPPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMEL 168
Query: 569 IINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 718
I E+ + ++ +G++ +++ + ++G + +T++V
Sbjct: 169 I-------HAMVERYRGISVFAGVGERSREGHEMLLDMRNSGVLPHTVLV 211
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 64.9 bits (151), Expect = 3e-09
Identities = 36/120 (30%), Positives = 63/120 (52%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+K + + +N+ ++ + I G IV+ TG + V VG ++G+V+DA G P+D +
Sbjct: 58 IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD-E 116
Query: 377 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
S + P + R +RE M G++++DSL+ +G+GQR I GK+ L
Sbjct: 117 SFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTL 176
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 LNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPI 385
+++ V ++ F + I G + +G + +P+G +LG VVDA G P+D + G +
Sbjct: 57 ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLDEQELGVV 116
Query: 386 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
T+ P + R ++ EP+ T IKA+DS +PIG+GQR I+ GK+ L
Sbjct: 117 QTQCVFLASHINP--LTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 64.1 bits (149), Expect = 5e-09
Identities = 41/147 (27%), Positives = 69/147 (46%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 490
V VG +LGRV+D G P+D I+ + + + R + +P+ TGI+A+D+L
Sbjct: 93 VEVGPGLLGRVIDGFGKPMDTGPAINARESYSLHGTPTNPLDRQHITQPLVTGIRAIDAL 152
Query: 491 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 670
+P G+GQR I G GK+ T++ N D + IG++ V
Sbjct: 153 LPCGKGQRIGIFGGSGVGKS-----TLLGSMSRNNSAD-----VTVIAMIGERNREVRGF 202
Query: 671 VKRLTDAGAINYTIIVSATASDAAPLQ 751
++ +++V AT+ APL+
Sbjct: 203 LENELGPEGRKRSVVVCATSERPAPLR 229
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 63.3 bits (147), Expect = 8e-09
Identities = 45/155 (29%), Positives = 78/155 (50%)
Frame = +2
Query: 284 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 463
VKR A + VG +LGRV+D LG PID KGP+ + + + R +R+P+
Sbjct: 87 VKRKKA--SLGVGPGLLGRVIDGLGVPIDDKGPLAIREEYPIYANPVNPMKRRPIRQPLD 144
Query: 464 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIG 643
GI+A+++L+ G GQR I+ GK+ L + I R+ + + + IG
Sbjct: 145 LGIRAINALLTCGEGQRVGIMAGSGVGKSTL-LGMI---ARYTEADVN------VIALIG 194
Query: 644 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
++ + + +++ + +++V AT SD PL
Sbjct: 195 ERGRELREFIEKDLQEEGLKKSVVVVAT-SDQPPL 228
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +2
Query: 233 VGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 412
V V+ FG+ +K IV TG + PVG+ LGR+++ LGNPID KG I + ++ +
Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPIH 108
Query: 413 IKAPGIIPRVSVREPMQTGIKAVDSLVP 496
P ++ + ++TGIK +D L P
Sbjct: 109 KLPPKFSDQIFNNDILETGIKIIDLLCP 136
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 63.3 bits (147), Expect = 8e-09
Identities = 45/166 (27%), Positives = 79/166 (47%)
Frame = +2
Query: 251 GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 430
G+ ++ G V G + +PVGE + GRV+D LG P+D +D + V P
Sbjct: 72 GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALDDLPTVVVDNLPPAA 131
Query: 431 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 610
+ R + + + G++A+D+L+ GRGQR I+ GK++L +G D +
Sbjct: 132 LSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSLL-------SMIARGTDAE 184
Query: 611 KKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
+ IG++ V + ++ + +I+V AT SD P+
Sbjct: 185 ---ISVIALIGERGREVREFLENDLGPAGLRRSIVVVAT-SDEPPV 226
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 490
VPVGE +LGRV+D G P+DG+ D + + P ++ R + +P+ TGI+A+DS+
Sbjct: 91 VPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAMPPPAMV-RQPITQPLMTGIRAIDSV 149
Query: 491 VPIGRGQRELIIGDRQTGKTAL 556
G GQR I GK+ L
Sbjct: 150 ATCGEGQRVGIFSAPGVGKSTL 171
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 62.1 bits (144), Expect = 2e-08
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Frame = +2
Query: 215 NLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT- 391
+L+ +V + ++ G IV G + +PV ++ LGR+++ G P+DG P++T
Sbjct: 65 HLDEHHVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETH 124
Query: 392 KSRMRVGIKAPGIIPRVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 568
+ R + AP + S +E ++TGIK +D L P RG + + G GKT L ++
Sbjct: 125 EYRDVLANFAP--LEMTSTQETILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMEL 182
Query: 569 IINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
+ + ++G ++ +G++ ++ + AG ++ T++V ++ +
Sbjct: 183 MHAIIQLHQGTS-------VFAGVGERIREGHELWHEMKSAGVMDKTLMVFGQMDESPGV 235
Query: 749 QY 754
++
Sbjct: 236 RF 237
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/102 (31%), Positives = 53/102 (51%)
Frame = +2
Query: 242 VVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKA 421
+ G+ + +K G V TGA + VPVG+ LGR++D LGNPID GPI + R + +A
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHREA 112
Query: 422 PGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 547
P + E ++ G + + +G + ++ R G+
Sbjct: 113 PSYADQAGGNELLKNGHQGDRPWSAVRQGGKVSLVRRRGRGQ 154
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 61.7 bits (143), Expect = 3e-08
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = +2
Query: 194 GLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 373
G K L P +F K+ E I + P G ++LGRV++ G+P+D
Sbjct: 71 GFKKKIFFLIPIQNSYGIFPGAKVFSENYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDN 130
Query: 374 KGPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 547
G ++ K ++ K I P R + E + TG+ A++SL+ +GRGQR I GK
Sbjct: 131 LGDLNLKKKLFNFFKKKPINPLNRKPITEILDTGVCAINSLLTVGRGQRMGIFSQAGIGK 190
Query: 548 TAL 556
+ L
Sbjct: 191 SML 193
>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
cenocepacia PC184
Length = 386
Score = 61.7 bits (143), Expect = 3e-08
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +2
Query: 314 PVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLV 493
PVGE + GRV+D LG P+D GP+ + + P + R + P TG++ +D L+
Sbjct: 27 PVGEALFGRVLDGLGRPLDDLGPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLM 86
Query: 494 PIGRGQRELIIGDRQTGKTAL 556
+G GQR I GK+ L
Sbjct: 87 TLGIGQRVGIFAPSGVGKSTL 107
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 60.5 bits (140), Expect = 6e-08
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQILGRVVDALGNP-IDGKGPIDTKSRMRVGIKAPGIIPRV 442
++ G V+ TG + VPVG+ +LGR++ G P DG R + AP + +
Sbjct: 97 LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQK 156
Query: 443 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 622
S TGIK +D L P+ +G + + G GKT ++ I E+ +
Sbjct: 157 SANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI-------HAMVERYRGI 209
Query: 623 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 718
++ IG++ +++ + +G + T++V
Sbjct: 210 SVFAGIGERSREGHEMLLDMRGSGVLGRTVLV 241
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 60.5 bits (140), Expect = 6e-08
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +2
Query: 233 VGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 412
V + G+ +K G IV G + VPVGE LGR+++ LG ID KG + +K +
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNIE 111
Query: 413 I-----KAPGIIPRVSVREPMQTGIKAVDSLVPIGR 505
P I + S +E ++TGIK +D + P +
Sbjct: 112 YWEIHRSPPNYIDQSSSKEILETGIKVIDLICPFSK 147
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 60.1 bits (139), Expect = 8e-08
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 200 KGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 379
+ + L+ + + + GN + + ++ TG + VG +LG V+D G ++
Sbjct: 48 RAQVVGLQRERTVLSLIGNAQGLSRDVVLYPTGRALSAWVGYSVLGAVLDPTGKIVERFT 107
Query: 380 P-IDTKSRMRV-GIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 553
P + S RV + P RV VREP+ TG++A+D L+ G GQR I GKT
Sbjct: 108 PEVAPISEERVIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTM 167
Query: 554 L 556
L
Sbjct: 168 L 168
>UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5;
Enterobacteriaceae|Rep: Putative uncharacterized protein
- Escherichia coli B
Length = 559
Score = 59.7 bits (138), Expect = 1e-07
Identities = 38/121 (31%), Positives = 60/121 (49%)
Frame = -2
Query: 574 DDRINGQGSLTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTG 395
DD I+ Q T LTVT+DQ TLTT +W VN T L+RL +R ++
Sbjct: 328 DDGIDSQCGFTCLTVTDDQFTLTTTDWDHGVNGFITGLYRLIYRLTFDNARSDCFYSREA 387
Query: 394 FRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNXSFLDKLVITKYYHTHIVRFQV 215
+ + ++ TQS+ +T + ++ N D+ STL+ +F V T T+ V +V
Sbjct: 388 VVIQRTFTVDWCTQSVNHTAQQATANRNFQDTASTLNFHAFGKVSVRTHNNRTYRVALEV 447
Query: 214 K 212
+
Sbjct: 448 Q 448
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +2
Query: 293 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 472
TG V GE +LGR++DA G+ IDG+G +M + +P + R + P TG+
Sbjct: 102 TGRQASVRCGEGLLGRILDANGDAIDGRGGFGPTVQMPIYAASPNPLARQLIDRPFATGV 161
Query: 473 KAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+A+D+++ G GQR I GK+ L
Sbjct: 162 RALDTVITAGVGQRLGIFAVAGGGKSTL 189
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 59.3 bits (137), Expect = 1e-07
Identities = 42/174 (24%), Positives = 85/174 (48%)
Frame = +2
Query: 227 DNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 406
D + ++ G+ + ++ G V+ +PVG +LGRV+D G P+DG P + +
Sbjct: 76 DRLVMMCEGSAEGLRPGARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSPPTSDITVP 135
Query: 407 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 586
+ + + R ++++P+ GI+A++SL+ + RGQR + GK+ L + R
Sbjct: 136 MQGEPLNPMDRGALQKPLDVGIRAINSLLTVARGQRIGLFAGSGVGKSTL----LGMMTR 191
Query: 587 FNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
F + + + +G++ V + V+ + ++V AT +D +PL
Sbjct: 192 FTEAD------VVVVGLVGERGREVREFVEDSLGPEGLKKAVVV-ATPADTSPL 238
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 59.3 bits (137), Expect = 1e-07
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Frame = +2
Query: 188 SSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPI 367
S ++G + D V V+ + +++G V +V G ++G+VVD GNP+
Sbjct: 57 SRRIRGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDPFGNPL 116
Query: 368 DGK--GPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 535
DG G ++ K G++ P I P R +RE TG+++V++L +G+GQ+ I
Sbjct: 117 DGGFIGFVEEK-----GLELPQINPLYRERIREVFDTGVRSVNALFTLGKGQKIGIFAGA 171
Query: 536 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 715
GK+ L + I R +K + + IG++ V + ++ + + +++
Sbjct: 172 GVGKSTL-LGMI---TRHSKAD------VVVLALIGERGREVKEFLEEVLGEEGLKKSVV 221
Query: 716 VSATASDAAPL 748
V +TA D +P+
Sbjct: 222 VVSTA-DQSPI 231
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 58.8 bits (136), Expect = 2e-07
Identities = 39/164 (23%), Positives = 72/164 (43%)
Frame = +2
Query: 215 NLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 394
+L D V + + ++ G V + +P G+ I GR+ + +G IDG T
Sbjct: 50 HLGEDTVRTIAMEGTEGLQRGMDVTDKEGPISMPTGDGIKGRLFNVVGEAIDGIENPKTD 109
Query: 395 SRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII 574
R+ + AP + E + TGIK +D L P +G + + G GKT L + I
Sbjct: 110 RRVSIHRAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGGKIGLFGGAGVGKTVLIQELIN 169
Query: 575 NQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY 706
N + G ++ +G++ +++ + ++G +NY
Sbjct: 170 NIAKAYAG-------VSVFAGVGERTREGNDLLREMIESGIVNY 206
>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
Archaea|Rep: V-type ATP synthase beta chain -
Pyrobaculum aerophilum
Length = 467
Score = 58.8 bits (136), Expect = 2e-07
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Frame = +2
Query: 233 VGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR-V 409
V V+ G L +G V+ G + +PV EQ++GR++D G P D P+ R V
Sbjct: 56 VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRDHM-PLPPPEDFRDV 114
Query: 410 GIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRF 589
+ R EP++TGI A+D L + RGQ+ I +A + +Q
Sbjct: 115 NGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNLMAAQVV--RQAT 172
Query: 590 NKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 736
+G +E + ++V +G K + GA+ + V ASD
Sbjct: 173 VRGSEE--EFAVVFVGVGIKTEEALFFMDEFRKTGALRRAVAVLNLASD 219
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC
3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB
intein]; n=8; cellular organisms|Rep: V-type ATP
synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit
B) [Contains: Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 58.4 bits (135), Expect = 2e-07
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Frame = +2
Query: 200 KGMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+G L D V VF G L V+ TG + +PV +LGR+++ G PIDG
Sbjct: 48 RGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETLRIPVSTDLLGRILNGRGEPIDGG 107
Query: 377 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
I + + + R + +QTGI A+D + + RGQ+ I L
Sbjct: 108 PEIVPEDELDIHGAPINPAARKYPSDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNEL 167
Query: 557 AIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 736
A I +Q GE+E + ++ A+G A + + GA++ +++ A D
Sbjct: 168 AAQ--IARQATVPGEEE--EFAVVFAAMGITHEEAAFFRREFEETGALDRAVLILNLADD 223
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +2
Query: 317 VGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 496
+G+ LGRV++ LG P+DGKG + + ++ + + R +V P+ G+ A++ L+
Sbjct: 97 IGDSWLGRVINGLGEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLT 156
Query: 497 IGRGQRELIIGDRQTGKTAL 556
IG+GQR ++ GK+ L
Sbjct: 157 IGKGQRVGLMAGSGVGKSVL 176
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKL 265
QAE +V F SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 76 QAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 57.6 bits (133), Expect = 4e-07
Identities = 31/100 (31%), Positives = 55/100 (55%)
Frame = +2
Query: 206 MALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 385
+A +L V + + + + G +V TGA + VPVG+++LGR ++ LG+PID K +
Sbjct: 51 VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVV 110
Query: 386 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR 505
++ + +AP + + E + TGIK + S + I R
Sbjct: 111 ESSDEWEIHREAPAFADQDTGTEVLVTGIKVLTSSLLIVR 150
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 57.2 bits (132), Expect = 5e-07
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +2
Query: 305 VDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVD 484
+++ + +++LGRV+D+LG PID KG S + + I R + + TG+K +D
Sbjct: 91 LEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLD 150
Query: 485 SLVPIGRGQRELIIGDRQTGKTAL 556
+P+ +GQR I GK+ L
Sbjct: 151 GFLPVAKGQRVGIFSGSGVGKSTL 174
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 56.8 bits (131), Expect = 7e-07
Identities = 39/166 (23%), Positives = 78/166 (46%)
Frame = +2
Query: 251 GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 430
G+ + I G ++ + VG +LGRV+DA GNP+D + + +
Sbjct: 80 GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMDEYALSNLGTLFPLHGTRLNP 139
Query: 431 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 610
R ++ PMQ G++A+D+ +P+G GQR + GK+ T++ N +
Sbjct: 140 FTRHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKS-----TLLGMLARNSDAEVN 194
Query: 611 KKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
+ +G++ V + + + + A+ +++++ AT SD P+
Sbjct: 195 -----VIALVGERSREVREFLDQALGSEALQHSVVIVAT-SDMPPV 234
>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
flagellum-specific; n=17; Rhodobacteraceae|Rep:
H+-transporting two-sector ATPase, flagellum-specific -
Silicibacter pomeroyi
Length = 445
Score = 56.4 bits (130), Expect = 9e-07
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Frame = +2
Query: 320 GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG-IIPRVSVREPMQTGIKAVDSLVP 496
G LGRVVD G P+DG+ P+ S+ R ++AP + R + + M TG+ A+++L+P
Sbjct: 98 GRHWLGRVVDPFGRPLDGR-PLMRGSKARDLMRAPPPAVQRKPLGQRMATGLAALNTLLP 156
Query: 497 IGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVK 676
I RGQR + GK++L + T+ + + + IG++ V + V
Sbjct: 157 IVRGQRVGLFAGSGVGKSSL-LATLAKSMQADA---------VVVALIGERGREVNEFVA 206
Query: 677 RLTDAGAINYTIIVSATASDAA 742
+ + ++IV+AT+ +A
Sbjct: 207 KALGPEGLARSVIVAATSDQSA 228
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 55.6 bits (128), Expect = 2e-06
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
Frame = +2
Query: 203 GMALNLEPDNVGVVVFGNDK-LIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 379
G + L D + V V + L V TG + + V +LGRV+D LG P DG
Sbjct: 51 GQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLP 110
Query: 380 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 559
P ++R + A + R + ++TG+ A+D + + RGQ+ + + LA
Sbjct: 111 PPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLA 170
Query: 560 IDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 736
I+ Q R GE ++ A+G ++ AG ++ T++ A D
Sbjct: 171 AQ-IVCQARVRGGE----PFAVVFAAMGSPFREYHAFLEAFRAAGVLDRTVVFLNRAED 224
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 55.6 bits (128), Expect = 2e-06
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +2
Query: 203 GMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 382
GM + E + G F + + G V ++ PVG +LGRV++ LG ID KG
Sbjct: 56 GMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGA 115
Query: 383 IDTKSRMRVGIKAP-GIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+D + R+ I P + R + E G+K++D L+ G+GQ+ I GK+ L
Sbjct: 116 LDYE-RLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTL 173
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +2
Query: 317 VGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 496
VG +LGRV+DA G P+DG D + + + R +V P+ G++A+++ +
Sbjct: 98 VGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNPLARTAVSRPLDVGVRAINAALT 157
Query: 497 IGRGQRELIIGDRQTGKTAL 556
+G+GQR I+ GK+ L
Sbjct: 158 VGQGQRIGIVAGSGEGKSVL 177
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 54.0 bits (124), Expect = 5e-06
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +2
Query: 233 VGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 412
V + G + G V G + VPVG LGR+V+ LG PID KGP++ K ++
Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKIE 111
Query: 413 IK-----APGIIPRVSVREPMQTGIKAVDSLVPIGR 505
+ APG +++ ++TGIK +D + P +
Sbjct: 112 HREIHRSAPGYEEQLNSCTILETGIKVIDLICPFSK 147
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 53.6 bits (123), Expect = 7e-06
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Frame = +2
Query: 233 VGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMR 406
V V GN+ +K G VK + + +++LGRV+D +G +D P+
Sbjct: 349 VSTFVLGNETGLKIGTKVKSKNQSYAIKISKRLLGRVIDPIGKILDDSIATPVHGNMYAP 408
Query: 407 VGIKAPGIIPRVSVREP---MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 577
+ ++ R V ++TGIK +D L+PI +G + ++G GKT + + I
Sbjct: 409 LEMQHDSEATRYVVSPKNAILETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELINA 468
Query: 578 QQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 754
+F+ G ++ IG++ ++ K G +N T + +++ L++
Sbjct: 469 FIKFHDG-------VSVFAGIGERIREGHELWKEAEALGFLNKTAFIFGQMNESPGLRF 520
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 53.2 bits (122), Expect = 9e-06
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAP-GIIPRV 442
I G V TG V V + +LG+VV+A G P+DG G + + + + P + R
Sbjct: 56 IHVGSEVVATGLPASVTVNDGMLGKVVNAFGTPLDG-GVLSSPGKSYPLYREPINPMERA 114
Query: 443 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 622
EP+ G++ +D+ + +GQR I GK+ L + I Q D + +
Sbjct: 115 PCDEPLNLGVRVIDAFCAMAKGQRVGIFAGSGVGKSTL-LGMIAKQC------DAEVNVI 167
Query: 623 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAA 742
+ IG++ V++ ++ + + +++V+ATA + A
Sbjct: 168 AL---IGERGREVSEFIQDNLGSDGLKKSVVVAATADEPA 204
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 53.2 bits (122), Expect = 9e-06
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 332 LGRVVDALGNPIDGKGPI-DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRG 508
+GRVVD LG P+D GP+ + +S V P R V ++TGI+A D+ P+ RG
Sbjct: 87 IGRVVDPLGRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRVGARLETGIRAFDAFTPLCRG 146
Query: 509 QRELIIGDRQTGKTAL 556
QR + GK+ L
Sbjct: 147 QRMGVFAGSGVGKSTL 162
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 490
+P+G +LGRV+D G P+DG DT + + R + + TG++A+++L
Sbjct: 110 LPLGPALLGRVLDGGGKPLDGLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINAL 169
Query: 491 VPIGRGQRELIIGDRQTGKTAL 556
+ +GRGQR + GK+ L
Sbjct: 170 LTVGRGQRMGLFAGSGVGKSVL 191
>UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n=2;
Brucella|Rep: Flagellum-specific ATP synthase FliI -
Brucella suis
Length = 422
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 335 GRVVDALGNPIDGKGPIDTKSR-MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQ 511
GRV++ALGN IDGKG + +R M AP + R V ++TG+ +D P+ GQ
Sbjct: 109 GRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQ 168
Query: 512 RELIIGDRQTGKTAL 556
R I GK+ L
Sbjct: 169 RIGIFAGSGVGKSTL 183
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 52.8 bits (121), Expect = 1e-05
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +2
Query: 203 GMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 382
G + +EP+ V V I +V R GA P + GR ++AL PIDG G
Sbjct: 72 GEVVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPT-DNWCGRTINALAEPIDGLGA 130
Query: 383 I-DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 559
+ R + AP + R V + +TG++A+D P+ GQR I GK+ L
Sbjct: 131 LLQGDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTL- 189
Query: 560 IDTIINQQRFNK 595
+ + F+K
Sbjct: 190 LSMLARADAFDK 201
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 329 ILGRVVDALGNPIDGKGPID---TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPI 499
+LGRVVD LGNP+DG GP+ + + G + R + P TG++A+D L+
Sbjct: 102 LLGRVVDGLGNPLDG-GPVPRPLASAAAQAGEGTLNPLERPVIATPFATGVRAIDGLLTC 160
Query: 500 GRGQRELIIGDRQTGKTAL 556
G GQR I GK+ +
Sbjct: 161 GVGQRTGIFAPAGGGKSTI 179
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 51.6 bits (118), Expect = 3e-05
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Frame = +2
Query: 203 GMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 379
G + + V V VF G D L E V+ ++P+ +LGR+ D +G P D +
Sbjct: 43 GQVIFTSGEVVLVQVFEGTDDLDLERTWVRFLEEPFEIPLSPDVLGRIFDGVGAPRDDRP 102
Query: 380 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 559
P+ + V + R +E +QTGI A+D L + RGQ+ I LA
Sbjct: 103 PMIAPLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGLNSLVRGQKLPIFSGSGLPHNRLA 162
Query: 560 IDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 736
I+ Q + E+ + ++ A+G S + ++G + ++ A D
Sbjct: 163 AQ-IVRQAKL---LGEETRFVMVFAAMGVTYSDARFFQEEFENSGVLGKVVMYLNLADD 217
>UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:
SpaL/InvC - Sodalis glossinidius
Length = 437
Score = 51.6 bits (118), Expect = 3e-05
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Frame = +2
Query: 293 TGAIVDVPVGEQILGRVVDALGN---PIDGKGP---IDTKSRMRVGIKAPGIIPRVSVRE 454
TG +P+GE +LG V+D LGN +DG I T+ R + ++A R + E
Sbjct: 82 TGKAFPIPLGEALLGAVLDPLGNICARLDGATETALIATEHRP-IDVEALHFSEREPIAE 140
Query: 455 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 634
+ T I+A+D L+ G GQR I GKT+L ++ +I E + +Y + +
Sbjct: 141 KLITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSL-MNMLI--------EHSEADVYVVGL 191
Query: 635 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQ 751
IG++ V + V+ L + + ++V AT SD A L+
Sbjct: 192 -IGERGREVTEFVETLRHSPRRHKCVLVYAT-SDYASLE 228
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 51.2 bits (117), Expect = 4e-05
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Frame = +2
Query: 212 LNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG---- 379
+ PDN + G I +G V + V E++LG V+D G ++ G
Sbjct: 71 VGFSPDNTFLSALGALDGIAQGATVTPLYQPHRIQVSERLLGSVLDGFGRALEDGGESAF 130
Query: 380 --PIDTKSRMRVGI-KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 550
P R + + AP R + +P+ TG++AVD L+ IG+GQR I GKT
Sbjct: 131 VEPGQVTGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKT 190
Query: 551 ALAIDTIIN 577
L + N
Sbjct: 191 TLLAELARN 199
>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Burkholderia dolosa AUO158
Length = 476
Score = 51.2 bits (117), Expect = 4e-05
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +2
Query: 275 GXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSV 448
G V GA + +G GR+VD +G P DG GP+ + + ++ P I P + V
Sbjct: 121 GARVMPAGAGRQLTIGAAWRGRIVDGMGEPFDGGGPLTGDAPL--DLRPPRINPMKKRPV 178
Query: 449 REPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ G++A++ ++ IGRGQR + GK+ L
Sbjct: 179 AGVLDVGVRAINGMLTIGRGQRVGLFAGSGVGKSVL 214
>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
Flagellar biosynthesis/type III secretory pathway ATPase
- Burkholderia dolosa AUO158
Length = 390
Score = 51.2 bits (117), Expect = 4e-05
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Frame = +2
Query: 293 TGAIVDVPVGEQILGRVVDALGNPI----DGKGPIDTKSRMRVGIKAPGIIPRVSVREPM 460
TG + V +G+ +LG VVD+ G + D + + + P I R+ +R
Sbjct: 79 TGRPLTVRLGDDLLGAVVDSTGRIVGRIADARPERAADTWAALEAPPPSIDNRLPIRTRF 138
Query: 461 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAI 640
TG++A+D L+ G GQR I + TGKT L+ I D + I
Sbjct: 139 LTGVRAIDGLMTCGIGQRVGIFAEAGTGKTTLSKMLI----------DHASADVSVIGLI 188
Query: 641 GQKRSTVAQIVKRLTDAGAINYTIIVSATASDA 739
G++ V ++V+ L+ T+IV +T SDA
Sbjct: 189 GERGREVTELVEELSTFARRERTVIVFST-SDA 220
>UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA14484-PA - Nasonia vitripennis
Length = 341
Score = 50.8 bits (116), Expect = 5e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 203 GMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 379
G L + V VF G + + + TG I+ PV E +LGRV + G PID
Sbjct: 68 GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGP 127
Query: 380 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 514
PI + + + + R+ E +QTG+ A+D + I RGQ+
Sbjct: 128 PILAEDYLDIQGQPINPWSRIYPEEMIQTGLSAIDVMNSIARGQK 172
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 50.8 bits (116), Expect = 5e-05
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +2
Query: 251 GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPI-DGKGPIDTKSRMRVGIKAPG 427
G + I + + TG + VG +LG VVDA GN + P +R +
Sbjct: 74 GETRGISQRTEIVPTGREPAISVGNFLLGAVVDAHGNVLRPSANPAGDDARFLQPLYGQP 133
Query: 428 IIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 583
+ P R +R+P +GI A+D L+ G+GQR I G GK+ L + N +
Sbjct: 134 VNPLSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNK 187
>UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio
parahaemolyticus AQ3810|Rep: Probable ATP synthase YscN
- Vibrio parahaemolyticus AQ3810
Length = 157
Score = 50.8 bits (116), Expect = 5e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 326 QILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR 505
Q+LG+++D LG P DG + + V AP + R + +P+ G++++D L+ G
Sbjct: 35 QVLGKILDGLGRPFDGAQSQEPSAWYPVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGE 94
Query: 506 GQRELIIGDRQTGKTAL 556
GQR I GK+ L
Sbjct: 95 GQRMGIFAAAGGGKSTL 111
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 50.8 bits (116), Expect = 5e-05
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 1/182 (0%)
Frame = +2
Query: 200 KGMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+G L ++ D V +F G + + V+ G + + V E ++GRV D LG P D
Sbjct: 41 RGQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLGVSEDMIGRVFDGLGRPKDNG 100
Query: 377 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
I + + + + I R E +QTGI A+D L + RGQ+ + L
Sbjct: 101 PEILPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKEL 160
Query: 557 AIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 736
A I Q D+ ++ AIG ++ GAI+ +++ A+D
Sbjct: 161 AAQ-IARQATVLDSSDD---FAVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216
Query: 737 AA 742
A
Sbjct: 217 PA 218
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 50.4 bits (115), Expect = 6e-05
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Frame = +2
Query: 245 VFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALG-------NPIDGK--GP-IDTK 394
V G ++ I+ G + +P+ E++LGR++D +G +P+ GK P I+T+
Sbjct: 266 VLGREQGIEIGSFARSKNNPYSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETE 325
Query: 395 SRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII 574
S+ K + P+ + ++TGIK +D L+PI G + ++G GKT + + +I
Sbjct: 326 SKQTEKYK---VFPKTQI---LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELI 378
Query: 575 N 577
N
Sbjct: 379 N 379
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 50.0 bits (114), Expect = 8e-05
Identities = 38/161 (23%), Positives = 76/161 (47%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 445
I+ G + + + + VG +LG V+D GNP++ K + ++++ + + + R
Sbjct: 63 IRIGSFISSSLSSSKIGVGADLLGTVLDPFGNPLN-KEKLQFETKVSLKNETINPLLRER 121
Query: 446 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 625
++ P+ G+++++ L IG+GQR I GK+ L + RF +
Sbjct: 122 IKTPLDIGVRSINGLFTIGKGQRIGIFASAGVGKSTL----LGMVSRFTSADIN------ 171
Query: 626 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 748
+ IG++ V + ++ + +I+V AT SD PL
Sbjct: 172 VIALIGERGREVREFIEDNLGKEGLEKSIVVVAT-SDQPPL 211
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 49.6 bits (113), Expect = 1e-04
Identities = 43/151 (28%), Positives = 65/151 (43%)
Frame = +2
Query: 257 DKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 436
++ IK I T +VPVG G + D LGN ++ + P D K ++ V
Sbjct: 57 EEQIKINDIAIDTKESFNVPVGSATNGAIFDVLGNLLN-EHPGDFK-KVEVDSTISTEKH 114
Query: 437 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 616
S E + TGIK +D VPI +G + I G GKT + + I N R D K
Sbjct: 115 FNSDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSNDVK-- 172
Query: 617 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYT 709
+V G++ ++ L ++ I T
Sbjct: 173 --VFFVGTGERTREAKELYDELVNSSLIKST 201
>UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney
isoform; n=451; cellular organisms|Rep: Vacuolar ATP
synthase subunit B, kidney isoform - Homo sapiens
(Human)
Length = 513
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +2
Query: 293 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQT 466
TG I+ PV E +LGRV + G PID KGP+ + + I I P R+ E +QT
Sbjct: 109 TGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQT 166
Query: 467 GIKAVDSLVPIGRGQR 514
GI +D + I RGQ+
Sbjct: 167 GISPIDVMNSIARGQK 182
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK------GPIDTKSRMRVGIKAPG 427
I+ G ++ G + V + +LG V+D G P+ G GP D ++ + V A
Sbjct: 82 IQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIADALP 141
Query: 428 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 577
R + + TGI+A+DS + +G GQR + GKT L + N
Sbjct: 142 PTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARN 191
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 47.6 bits (108), Expect = 4e-04
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 2/186 (1%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+ G ++ + ++ V+ FG + + G V+ V + +G VVDALG P+
Sbjct: 56 IDGEVVSAQGSDLCVLPFGTWEGVSVGNTVELIEHDDMVSPDDSWIGTVVDALGRPLTQY 115
Query: 377 GPIDTKSRM-RVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 553
R R PG R V E ++T IK +D PI RGQR + GK+
Sbjct: 116 TRARRPRRKTRFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKS- 174
Query: 554 LAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKR-LTDAGAINYTIIVSATA 730
T++ N D + IG++ V Q ++ L + G ++VS
Sbjct: 175 ----TMMAMLARNTDAD-----VIVIGLIGERGREVQQFIQEDLGEEGMARAVVVVS--T 223
Query: 731 SDAAPL 748
D APL
Sbjct: 224 GDEAPL 229
>UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25;
Eukaryota|Rep: Vacuolar ATP synthase subunit B -
Plasmodium falciparum
Length = 494
Score = 46.8 bits (106), Expect = 8e-04
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Frame = +2
Query: 200 KGMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+G L + + VF G + + V+ +G I+ +P+ +++LGRV + G PID K
Sbjct: 68 QGQILEVCGKKAVIQVFEGTSGIDNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPID-K 126
Query: 377 GPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQR 514
GP + + + I I P RV +E +QTGI +D + I RGQ+
Sbjct: 127 GP-NILADDYLDINGNPINPQCRVYPKEMIQTGISTIDVMNSIVRGQK 173
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 45.6 bits (103), Expect = 0.002
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +2
Query: 218 LEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 397
+E +N ++ F + + G V V +P G +LG+V+ A G ++ +
Sbjct: 62 IEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEDA--ENIP 119
Query: 398 RMRVGIKAPGI--IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
++ + AP I R + + +TGIK++DS++ IG GQ+ I GK+ L
Sbjct: 120 LQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 174
>UniRef50_Q8VNS1 Cluster: EscN protein; n=11;
Enterobacteriaceae|Rep: EscN protein - Escherichia coli
Length = 446
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 218 LEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPIDT 391
++ D V ++ F + + G + G + VG+++LGR+VD +G P+ P
Sbjct: 73 IDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNITAPYLP 132
Query: 392 KSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
R + P + R + +P G++A+D L+ G GQR I GK+ L
Sbjct: 133 FERSLYA-EPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186
>UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1;
Roseobacter sp. AzwK-3b|Rep: Flagellum-specific ATP
synthase - Roseobacter sp. AzwK-3b
Length = 474
Score = 44.4 bits (100), Expect = 0.004
Identities = 43/184 (23%), Positives = 83/184 (45%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
L G L L+ D V+ + G V+ + + P ++ +GR+VD G P+DG+
Sbjct: 58 LGGEVLRLDGDLANVMPDFPPDRVHIGDRVRIADSALIRP-SDRWIGRIVDPFGQPLDGR 116
Query: 377 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ + P R ++TG+ A ++L+PI RGQR + GK+ L
Sbjct: 117 PLPKGATGSALRADPPSAASRRGFGPRLETGLAAFNTLLPIVRGQRIGLFAGSGVGKSTL 176
Query: 557 AIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 736
+ T+ G + + + ++ IG++ + ++ + +++V+AT SD
Sbjct: 177 -LATL--------GRNTQADV-VVFALIGERGRELRHFIETGLGPEGMLRSVVVAAT-SD 225
Query: 737 AAPL 748
+PL
Sbjct: 226 QSPL 229
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAP 424
+K G V G + +P+GE+I GRV + +GN IDG G ++ R+ + P
Sbjct: 72 LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISIHRNPP 124
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 43.6 bits (98), Expect = 0.007
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Frame = +2
Query: 332 LGRVVDALGNPIDG-KGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRG 508
LGRV++A G ID P + +A I+ + + EP GIK+++ L+ + +G
Sbjct: 96 LGRVLNAHGEAIDDLPSPRGIDTITLRSAEAINILKKKPISEPFDVGIKSINGLLTLAKG 155
Query: 509 QRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTD 688
QR ++ GK+ L + I +F++ + + IG++ V + +++
Sbjct: 156 QRVGLVAGSGVGKSVL-MGMI---TKFSEAD------VVVVGLIGERNREVREFIEKNIG 205
Query: 689 AGAINYTIIVSATASDAAPL 748
A + +++++A A D +PL
Sbjct: 206 AEGLKKSVVIAAPA-DQSPL 224
>UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit B -
Bacteroides thetaiotaomicron
Length = 441
Score = 41.1 bits (92), Expect = 0.038
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 191 SGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPID 370
+G + + D+V + VF + I V G + V EQ+ GR +A G+PID
Sbjct: 37 NGKLAQVVKIAGDDVTLQVFEGTEGIPTNAEVVFLGKSPTLKVSEQLAGRFFNAFGDPID 96
Query: 371 GKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 514
G GP + +G + + R E + TGI +D + GQ+
Sbjct: 97 G-GPEIEGQEVEIGGPSVNPVRRKQPSELIATGIAGIDLNNTLVSGQK 143
>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
Archaea|Rep: V-type ATP synthase alpha chain -
Sulfolobus tokodaii
Length = 592
Score = 41.1 bits (92), Expect = 0.038
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 179 VXFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDA 352
V + S LK G +E D + V+ + +K G V R+GA + V +G ++G++ D
Sbjct: 28 VVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDKVYRSGAPLSVELGPGLIGKIYDG 87
Query: 353 LGNPIDGKGPIDTKSRMRVGIKAPGI 430
L P+D + + G+ P +
Sbjct: 88 LQRPLDSIAKVSNSPFVARGVSIPAL 113
>UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 444
Score = 40.7 bits (91), Expect = 0.050
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 332 LGRVVDALGNPIDGKGPIDTKSRMRVGIKA--PGIIPRVSVREPMQTGIKAVDSLVPIGR 505
LGR+++A G PIDG GP+ + + +K P R V E + G+++++ R
Sbjct: 98 LGRIINAFGEPIDGLGPL-PQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNVFTTTCR 156
Query: 506 GQRELIIGDRQTGKTAL 556
GQR I GK+ L
Sbjct: 157 GQRLGIFAGSGVGKSVL 173
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 39.5 bits (88), Expect = 0.12
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 455 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 565
PM ++ +D L PIG+GQR L++ +TGKT L D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 365 IDGKGPIDTKSRMRVGIKAPGIIP--RVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDR 535
I+G P + R + P I P R+ + P Q ++ VD + PIG+GQR +I+
Sbjct: 348 INGLHPSEAVKRKKFEDLTP-IFPNERIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQP 406
Query: 536 QTGKTAL 556
+TGKT L
Sbjct: 407 KTGKTTL 413
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 39.1 bits (87), Expect = 0.15
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 365 IDGKGPIDTKSRMRVGIKAPGIIP-RVSVR-EPMQTGIKAVDSLVPIGRGQRELIIGDRQ 538
I+G+ P + K+++ P R+ + EP ++ +D +VP+G GQR LI+ +
Sbjct: 317 INGEDPKEKKNKIPFESLTPDFPEYRMHMETEPTNHSMRVLDLVVPVGAGQRGLIVAPPR 376
Query: 539 TGKTAL 556
TGKT L
Sbjct: 377 TGKTVL 382
>UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 762
Score = 38.7 bits (86), Expect = 0.20
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +2
Query: 389 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 568
TKS + + ++ P S RE Q + VP Q I G Q G +A D
Sbjct: 596 TKSLIHMFLRGPWPFDPESTREAHQLHLNVERIRVPETVFQPSAIAGLDQAGLVEIAAD- 654
Query: 569 IINQQRFNKGEDEKKKLYCIYVAIG 643
I+NQQRF+ G++ + L +++ G
Sbjct: 655 IVNQQRFSSGQERARLLRDVFITGG 679
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 38.3 bits (85), Expect = 0.27
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 365 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR---EPMQTGIKAVDSLVPIGRGQRELIIGDR 535
I+G D K R G P + P +R P + + +D ++PIG+GQR LI+
Sbjct: 305 INGGSVEDAKKRPEFGKLTP-LYPNQRLRLETTPDRLTTRVIDLIMPIGKGQRALIVSPP 363
Query: 536 QTGKTALAID 565
+ GKT + D
Sbjct: 364 KAGKTTILQD 373
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 37.5 bits (83), Expect = 0.47
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 365 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQTGI--KAVDSLVPIGRGQRELIIGDR 535
++G+ P D +SR P + P +R E G+ + VD L P+G+GQR LI+
Sbjct: 115 VNGRTP-DRRSRPHFADLTP-LHPHERLRLEHPAAGLAGRVVDLLAPVGKGQRGLIVAPP 172
Query: 536 QTGKTAL 556
+TGKT L
Sbjct: 173 KTGKTVL 179
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 37.1 bits (82), Expect = 0.62
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 455 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
P + + +D L PIGRGQR LI+ + GKT L
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193
>UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:
NEQ263 - Nanoarchaeum equitans
Length = 416
Score = 37.1 bits (82), Expect = 0.62
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 1/157 (0%)
Frame = +2
Query: 284 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 463
+ R G + V E +G + + G PI G P R G+ +V E +
Sbjct: 54 INRQGNTYKIAVSEDYIGGIFNGFGEPIKGPKPYPEDYRDINGLAINPYARKVP-NEILY 112
Query: 464 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIG 643
TGI ++D P+ +GQ+ I L ++ + Q N +D+ I+ AIG
Sbjct: 113 TGISSIDVAHPLLKGQKIAIF-----SPPGLPMERLALQIARNVAKDKT----IIFAAIG 163
Query: 644 QKRSTVAQIVKRLTDAGAI-NYTIIVSATASDAAPLQ 751
+ + AI N I +S +D++P++
Sbjct: 164 VPSDIYKMFIDEFINTKAIMNSAIFIS--KADSSPIE 198
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 36.7 bits (81), Expect = 0.82
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +2
Query: 473 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 652
+ VD PIG+GQR LI+ +TGKT L D I N N E +Y I + I ++
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD-IANAIAANHPE-----VYMIMLLIDERP 560
Query: 653 STVAQIVK 676
V + +
Sbjct: 561 EEVTDMAR 568
>UniRef50_O83281 Cluster: Transcription termination factor rho; n=5;
Bacteria|Rep: Transcription termination factor rho -
Treponema pallidum
Length = 519
Score = 36.7 bits (81), Expect = 0.82
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +2
Query: 473 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 652
+ ++ PIG+GQR LI+ +TGK TI+ Q+ N ++Y I + I ++
Sbjct: 256 RVMNLFCPIGKGQRALIVAPPRTGK------TILMQKIANAITQNHPEVYLIVLLIDERP 309
Query: 653 STVAQIVKRLTDAGAINYTIIVSAT 727
V ++R DA I+ T AT
Sbjct: 310 EEVTD-MERTVDAEVISSTFDEQAT 333
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 36.7 bits (81), Expect = 0.82
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 EXLVXFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIV----DVPVGEQIL 334
+ L+ SSG+ GMA N+ P N+G V+ G LI+ I ++ + D P G QIL
Sbjct: 166 QLLINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQIL 225
Query: 335 GR 340
GR
Sbjct: 226 GR 227
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 36.3 bits (80), Expect = 1.1
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 365 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVDSLVPIGRGQRELIIGDR 535
++G +T++R G P + P +R + I + +D ++PIG+GQR LI+
Sbjct: 452 VNGLPAEETRNRPEFGKLTP-LYPNQRLRLETEQKILTTRVIDLIMPIGKGQRALIVSPP 510
Query: 536 QTGKTALAIDTIINQQRFNKGE 601
+ GKT + + I N N E
Sbjct: 511 KAGKTTI-LQNIANAISTNNPE 531
>UniRef50_P21212 Cluster: Uncharacterized protein in lcrE 5'region;
n=114; Bacteria|Rep: Uncharacterized protein in lcrE
5'region - Yersinia enterocolitica
Length = 58
Score = 36.3 bits (80), Expect = 1.1
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 311 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 472
V VGE +LG+V+D LG P DG + + V AP + R + P+ GI
Sbjct: 4 VGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTPLSLGI 57
>UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus
euphratica|Rep: ATP synthase subunit alpha - Populus
euphratica (Euphrates poplar)
Length = 98
Score = 36.3 bits (80), Expect = 1.1
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = +2
Query: 302 IVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAV 481
I +PV E LGRV++AL PIDG+ + APGII R S + ++
Sbjct: 17 IAQIPVSEAYLGRVINALAKPIDGR---------LIESPAPGIISRASSVAQVVNALQER 67
Query: 482 DSLVPIGRGQRELI 523
LV + +E+I
Sbjct: 68 KFLVELRTQFQEII 81
>UniRef50_Q4TFT9 Cluster: Chromosome undetermined SCAF4210, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4210,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 189
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 335 GRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRG 508
GRV + G PID +GP + + I I P R+ E +QTGI A+D + I RG
Sbjct: 3 GRVFNGSGKPID-RGP-SVLAEDYLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARG 60
Query: 509 QR 514
Q+
Sbjct: 61 QK 62
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 452 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+P + +D + PIG+GQR LI+ +TGKT L
Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 365 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVDSLVPIGRGQRELIIGDR 535
++G P + R P + P+ +R G+ + +D + PIG+GQR LI+
Sbjct: 402 VNGMAPEHGRGRPEFNKLTP-LYPQDRLRLETDPGVLTTRIIDLVAPIGKGQRGLIVAPP 460
Query: 536 QTGKTALAIDTIINQQRFNKGE 601
+TGKT + + I N N E
Sbjct: 461 KTGKT-MIMQAIANAITHNNPE 481
>UniRef50_Q02ZT7 Cluster: Lipopolysaccharide biosynthesis
glycosyltransferase; n=1; Lactococcus lactis subsp.
cremoris SK11|Rep: Lipopolysaccharide biosynthesis
glycosyltransferase - Lactococcus lactis subsp. cremoris
(strain SK11)
Length = 759
Score = 35.5 bits (78), Expect = 1.9
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +2
Query: 248 FGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG 427
FGN ++I++ I+ ++ + V + V A +DGK P D K+++ V + P
Sbjct: 274 FGNSEVIEKAKIILNN-PLIGLGVELEREFEKVKANFVDLDGKNPKDLKAKIYVSMHKPS 332
Query: 428 IIPRVSVREPMQTGIKAVDSLVP 496
IP+ P+Q G +P
Sbjct: 333 YIPKNKFLVPIQVGSALATGEIP 355
>UniRef50_A0GA71 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 277
Score = 35.5 bits (78), Expect = 1.9
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Frame = -2
Query: 571 DRINGQGSLTSLTVTND-QLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTG 395
DR GQ S T ND + T+ N+ +N D+S+ LT + G +T ++ DPH
Sbjct: 113 DRCAGQQDNWSNTQVNDNKSTIDLGNYKLDLNKKDSSM-LLTDKKSG-ETTKVWGDPH-- 168
Query: 394 FRVDWSLAINRVTQSIYYTPKDL-LSDGN-VYDSTSTLDNXSFLDKLVITKYYHTHIV 227
+D + T +++ P L LSDG + T N S+ DKL ITK ++V
Sbjct: 169 --ID-----SNGTSNMFNGPLSLNLSDGTKITVGTQGKGNVSYADKLTITKGNDAYLV 219
>UniRef50_Q8G5D1 Cluster: Excinuclease ABC subunit A-like protein;
n=7; Bacteria|Rep: Excinuclease ABC subunit A-like
protein - Bifidobacterium longum
Length = 865
Score = 35.1 bits (77), Expect = 2.5
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Frame = +2
Query: 194 GLKGMALNLEPDNVGVVVFGND-KLIKEGXIVKRTGAIVDVPVGEQIL-GRVVDALGNPI 367
GL G+ +L D VVV +D +++K + G + G I G V + NP
Sbjct: 421 GLLGVMHDLVADGNSVVVVDHDVRVLKAADHLIEMGPVAGAEGGHVIAQGTVGEVAANPS 480
Query: 368 DGKGPI---DTKSRMRVGIKAPGI--IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 532
P + +R+R + P + + R+ + +K +D V I RG+ + G
Sbjct: 481 SRIAPFLADNVSARIRERVAEPQVFDLGRIRMTTSQLHTVKPLD--VDIPRGRLVAVTGV 538
Query: 533 RQTGKTALAIDTII 574
+GKT + ++++I
Sbjct: 539 SGSGKTTMVLESLI 552
>UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16;
Alphaproteobacteria|Rep: Flagella-specific ATPase -
Bartonella bacilliformis
Length = 315
Score = 35.1 bits (77), Expect = 2.5
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 401 MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 580
M V AP + R V ++TG+K +D P+ GQR I GK+ L + ++
Sbjct: 1 MAVEAHAPPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTL-LSMMMQA 59
Query: 581 QRFNK 595
F+K
Sbjct: 60 DHFDK 64
>UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Flagellar protein
export ATPase FliI - Hyphomonas neptunium (strain ATCC
15444)
Length = 462
Score = 35.1 bits (77), Expect = 2.5
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 4/185 (2%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 376
+ G L++ D+V +++ +I+ G +V + G+ LG++++ G
Sbjct: 47 IHGEILSVSGDSVTALLYSPSDIIRIGDVV-HIEQEARIEPGDHWLGQIINYRGEVATEM 105
Query: 377 --GPIDTKSRMRVGIKAPGIIPRVSVR--EPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 544
G T + ++AP + + R + TG D+L+PI RGQR + G
Sbjct: 106 PAGAGLTAKGVSRALRAPALPAHLRHRLGPRLATGWMVTDTLLPICRGQRLGLFAGSGVG 165
Query: 545 KTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSA 724
K+ T + D + IG++ V + V + T++VSA
Sbjct: 166 KS-----TFLGSLAGGLEADR-----VVIALIGERSREVGEFVNVNLPETVRHKTVVVSA 215
Query: 725 TASDA 739
TAS++
Sbjct: 216 TASES 220
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 35.1 bits (77), Expect = 2.5
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 473 KAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ VD L P+G+GQR L++ +TGKT L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
muridarum
Length = 438
Score = 35.1 bits (77), Expect = 2.5
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 LNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 391
L + V + VFG + G V G ++V G+ +LGR + G PID + +
Sbjct: 44 LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNE---EI 100
Query: 392 KSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+ I P P R+ RE ++T I +D + + Q+ I AL
Sbjct: 101 CFGEPIPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
>UniRef50_A6GN32 Cluster: Type III secretion protein; n=1;
Limnobacter sp. MED105|Rep: Type III secretion protein -
Limnobacter sp. MED105
Length = 461
Score = 34.7 bits (76), Expect = 3.3
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Frame = +2
Query: 275 GXIVKRTGAIVDVPVGEQILGRVVDALGNPIDG-----KGPIDTKSRMRVGIK-APGIIP 436
G V G + + +L ++D +G +D G + S R I+ AP
Sbjct: 89 GSRVLPLGRAHSIKASDHLLSSLLDGMGRNLDHPNDRRSGVLSVDSDARPVIQVAPPASK 148
Query: 437 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
R V E + T ++ +D L+ +G GQR I GK+ L
Sbjct: 149 RPPVSESLVTKVRVIDGLLTLGIGQRVGIFAPPGCGKSTL 188
>UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 856
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 320 GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 436
GE ++ + D LGN IDG+ P TKS++R IK+ G+ P
Sbjct: 135 GESVVRGINDNLGNNIDGRTPQTTKSQVR--IKSLGMTP 171
>UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=1; Opitutaceae
bacterium TAV2|Rep: H+transporting two-sector ATPase
alpha/beta subunit central region - Opitutaceae
bacterium TAV2
Length = 403
Score = 34.3 bits (75), Expect = 4.4
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 473 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 565
+AVD P+G+G R LI+ +TGKT L D
Sbjct: 146 RAVDLFCPVGKGTRGLIVAPPRTGKTTLLRD 176
>UniRef50_O45827 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 106
Score = 34.3 bits (75), Expect = 4.4
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 698 INYTIIVSATASDAAPLQY 754
++YTI+VSATASDAAPL++
Sbjct: 1 MDYTIVVSATASDAAPLKF 19
>UniRef50_O67031 Cluster: Transcription termination factor rho;
n=251; Bacteria|Rep: Transcription termination factor
rho - Aquifex aeolicus
Length = 436
Score = 34.3 bits (75), Expect = 4.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 452 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
+P + + V + PIG+GQR LI+ + GKT L
Sbjct: 169 DPNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL 203
>UniRef50_A6AXF1 Cluster: VcsN2; n=7; Vibrio|Rep: VcsN2 - Vibrio
parahaemolyticus AQ3810
Length = 420
Score = 33.9 bits (74), Expect = 5.8
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 4/166 (2%)
Frame = +2
Query: 266 IKEGXIVKRTGAIVDVPVGEQIL-GRVVDALGNPIDGKGPIDTKSR---MRVGIKAPGII 433
++ G V+ T P+ E L G+V++ G + G + + + ++ +
Sbjct: 62 VQRGGKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQ 121
Query: 434 PRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKK 613
R + T +K +D L IG GQR + GKT T ++ N D
Sbjct: 122 MRAPIETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKT-----TTVSIMANNMDAD--- 173
Query: 614 KLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQ 751
I+ IG++ V + ++ I +I + +T S+A PL+
Sbjct: 174 --VVIFAMIGERAREVVEFLEGEIGPEVIRKSITIVST-SEANPLE 216
>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
sp. WH 5701
Length = 621
Score = 33.9 bits (74), Expect = 5.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 373
LK L + VF + + + G V++TG ++ V +G +L +V D L NP+ G
Sbjct: 51 LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPLAG 109
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 33.9 bits (74), Expect = 5.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 VSVREPM-QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 577
+ + P+ +TGIK VD L P +G + + G GKT L ++ I N
Sbjct: 201 IDITAPLFETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRN 247
>UniRef50_Q4RR34 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF15003, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 590
Score = 33.5 bits (73), Expect = 7.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 428 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
I+ R+S + P + D + IG+G L++G+ TGKT+L
Sbjct: 375 IVDRLSYKSPFADELLVEDLSLRIGQGAHVLVVGNTGTGKTSL 417
>UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=4;
Gammaproteobacteria|Rep: H+transporting two-sector
ATPase alpha/beta subunit central region - Marinomonas
sp. MWYL1
Length = 318
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 461 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 556
Q ++A+D + PIG GQR LI+ +GKT +
Sbjct: 55 QRTVRAMDLITPIGMGQRGLIVAPPGSGKTTM 86
>UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF56b
- Pinus koraiensis (Korean pine)
Length = 56
Score = 33.5 bits (73), Expect = 7.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 387 SIGPLPSIGLPKASTTRPRICSPTGTSTIAPV 292
S GP S G P+ RPR+ PTGT APV
Sbjct: 4 STGPKLSTGSPRTLKIRPRVAPPTGTLRGAPV 35
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 33.5 bits (73), Expect = 7.7
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 167 AEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLI 268
A LV F G + LNLE +NVGVV+ G+ +I
Sbjct: 73 ASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_Q22MH0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1239
Score = 33.5 bits (73), Expect = 7.7
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -2
Query: 505 TANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTGFRVDWSLAINRVTQSIY-YTPKD 329
T + Y+++N++ + L++ D +LNT + FR+D S +++T+S + +TPK+
Sbjct: 334 TTHLYEKLNTISNQIESLSNSQLKLDLKKLNTQNSSQFRIDSSR--SQITKSEFDHTPKE 391
Query: 328 LLSDGNV--YDSTST 290
+ N+ Y T T
Sbjct: 392 SIQMENLDKYRKTQT 406
>UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Aeropyrum pernix
Length = 597
Score = 33.5 bits (73), Expect = 7.7
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPI--- 367
L G + D + V+ + +K G V TGA + V +G +LG + D + P+
Sbjct: 36 LIGEITRIRGDRAFIQVYESTSGLKPGEPVVGTGAPLSVELGPGLLGTIYDGVQRPLPII 95
Query: 368 -DGKGPIDTKSRMRV--GIKAPGIIPR 439
+ +D + RM V GI+AP +PR
Sbjct: 96 AEKVAEVDPRRRMFVERGIQAPP-LPR 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,111,485
Number of Sequences: 1657284
Number of extensions: 12972572
Number of successful extensions: 37288
Number of sequences better than 10.0: 166
Number of HSP's better than 10.0 without gapping: 35903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37195
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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