Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B03
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 336 2e-92
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 336 2e-92
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 235 1e-70
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 79 3e-15
AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical ... 58 1e-08
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 55 6e-08
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 46 4e-05
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 31 0.86
Z92972-5|CAB07484.1| 212|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL021566-5|CAA16500.1| 212|Caenorhabditis elegans Hypothetical ... 30 2.6
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 28 8.1
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 336 bits (825), Expect = 2e-92
Identities = 161/197 (81%), Positives = 181/197 (91%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRV 343
QAE +V F SG+KGMA+NL+ DNVGVVVFGNDK+I+EG IVKRTGAIVDVPVG+ +LGRV
Sbjct: 49 QAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRV 108
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
VDALGNPIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELI
Sbjct: 109 VDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELI 168
Query: 524 IGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
IGDRQTGKTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++
Sbjct: 169 IGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMD 228
Query: 704 YTIIVSATASDAAPLQY 754
YTI+VSATASDAAPLQ+
Sbjct: 229 YTIVVSATASDAAPLQF 245
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 336 bits (825), Expect = 2e-92
Identities = 161/197 (81%), Positives = 181/197 (91%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRV 343
QAE +V F SG+KGMA+NL+ DNVGVVVFGNDK+I+EG IVKRTGAIVDVPVG+ +LGRV
Sbjct: 76 QAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRV 135
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
VDALGNPIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELI
Sbjct: 136 VDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELI 195
Query: 524 IGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
IGDRQTGKTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++
Sbjct: 196 IGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMD 255
Query: 704 YTIIVSATASDAAPLQY 754
YTI+VSATASDAAPLQ+
Sbjct: 256 YTIVVSATASDAAPLQF 272
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 235 bits (575), Expect(2) = 1e-70
Identities = 113/137 (82%), Positives = 125/137 (91%)
Frame = +2
Query: 344 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 523
V LGNPIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELI
Sbjct: 101 VVVLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELI 160
Query: 524 IGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
IGDRQTGKTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++
Sbjct: 161 IGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMD 220
Query: 704 YTIIVSATASDAAPLQY 754
YTI+VSATASDAAPLQ+
Sbjct: 221 YTIVVSATASDAAPLQF 237
Score = 50.0 bits (114), Expect(2) = 1e-70
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGN 256
QAE +V F SG+KGMA+NL+ DNVGVVV GN
Sbjct: 76 QAEEMVEFDSGIKGMAMNLDVDNVGVVVLGN 106
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 79.4 bits (187), Expect = 3e-15
Identities = 44/155 (28%), Positives = 80/155 (51%)
Frame = +2
Query: 239 VVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 418
+ + G + L++ G V TG + +PVG + LGR+++ +G PID +GPI +K+ + +
Sbjct: 120 IAMDGTEGLVR-GQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAE 178
Query: 419 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 598
AP + +E + TGIK VD L P +G + + G GKT L ++ I N + + G
Sbjct: 179 APEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 238
Query: 599 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAIN 703
Y ++ +G++ + + + G I+
Sbjct: 239 -------YSVFAGVGERTREGNDLYHEMIEGGVID 266
>AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical
protein H28O16.1b protein.
Length = 146
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 164 QAEXLVXFSSGLKGMALNLEPDNVGVVVFGNDKL 265
QAE +V F SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 76 QAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 418 GARYHSPGVCA*AYADWYQGC*LSGTNWPWS 510
G R H VCA W QG S NW W+
Sbjct: 115 GPRNHPTFVCARTNGYWSQGRRFSCANWTWT 145
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +2
Query: 203 GMALNLEPDNVGVVVF-GNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 379
G L + + V VF G + + I + TG I+ PV E +LGR+ + G PID
Sbjct: 66 GQVLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGP 125
Query: 380 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 514
P+ + + + + R+ E +QTGI A+D + I RGQ+
Sbjct: 126 PVLAEDFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 170
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 293 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 472
TG I PV +LGR+ + G PID P+ + + + + R+ E +QTGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 473 KAVDSLVPIGRGQR 514
A+D + I RGQ+
Sbjct: 169 SAIDVMNSIARGQK 182
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 698 INYTIIVSATASDAAPLQY 754
++YTI+VSATASDAAPL++
Sbjct: 1 MDYTIVVSATASDAAPLKF 19
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 197 LKGMALNLEPDNVGVVVFGNDKLIKEGXIVKRTGAIVDVPVGEQILGRVVDALGNPI 367
L G + LE D + V+ + G V RTG + V +G I+G + D + P+
Sbjct: 39 LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPL 95
>Z92972-5|CAB07484.1| 212|Caenorhabditis elegans Hypothetical
protein T19C9.5 protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 418 LNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDN--XSFLDKLVITKY 245
+N D H + + A NR+ Q +Y K + G +Y+S +D+ ++ +L+I KY
Sbjct: 117 INKDTHDALKSEAKAAKNRLRQMLYSKSKSI---GCIYESCDKIDSKGINYNTRLLICKY 173
>AL021566-5|CAA16500.1| 212|Caenorhabditis elegans Hypothetical
protein F08E10.7 protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 418 LNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDN--XSFLDKLVITKY 245
+N D H + + NR+ Q +Y K + G +Y+S +D+ ++ +LVI KY
Sbjct: 117 INKDTHNALKSEEKATKNRLRQMLYSKSKSI---GCIYESCDKIDSKGINYNTRLVICKY 173
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -2
Query: 421 RLNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDS---TSTLDN-XSFLDKLVI 254
R ++ P+ DW++ I + ++ +Y+T LL+ D T T +N F+ K V
Sbjct: 82 RTDSIPNANRHADWAIQIKKPSKYLYHTSFALLAAFAHRDQIIVTLTSENQFKFVFKTVY 141
Query: 253 TKYYHTH 233
+YY H
Sbjct: 142 CRYYDCH 148
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 16 LPPYSGLPXILSSTYXXPWXRA 81
LPP SGLP ++S +Y P+ +A
Sbjct: 41 LPPPSGLPPMVSESYSAPYAQA 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,971,029
Number of Sequences: 27780
Number of extensions: 288901
Number of successful extensions: 777
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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