Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B02
         (901 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W2E6 Cluster: CG15678-PA; n=2; Sophophora|Rep: CG1567...    44   0.004
UniRef50_Q7R728 Cluster: Putative uncharacterized protein PY0776...    38   0.35 
UniRef50_Q1GM45 Cluster: Sensor protein; n=1; Silicibacter sp. T...    35   2.5  
UniRef50_Q9VB07 Cluster: CG12880-PA; n=2; Sophophora|Rep: CG1288...    35   3.3  
UniRef50_UPI0000DC002A Cluster: Neurabin-1 (Neurabin-I) (Neural ...    34   4.3  
UniRef50_Q26CI3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_Q9W2E6 Cluster: CG15678-PA; n=2; Sophophora|Rep:
           CG15678-PA - Drosophila melanogaster (Fruit fly)
          Length = 197

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +3

Query: 261 METNSSLLKVVGNNCVIYVRTNYGDIEVVGNNCRVEVTNNYGIIHVVGANSLVNINKRWR 440
           +E N+  L+++GN   I +  N G ++V+GN+ R+++ NN G +   G +  + +     
Sbjct: 62  IENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQNNSGALKYTGNDGRIYLGSSST 121

Query: 441 GDSVQLLGANCRLIVAGKLMSAPSYEAQLSPSS 539
              V   G N  L V   L    S +A+  PSS
Sbjct: 122 QQVVDYTGCNGLLKVVKSL--DLSGDAKKRPSS 152



 Score = 35.9 bits (79), Expect = 1.4
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 264 ETNSSLLKVVGNNCVIY-VRTNYGDIEVVGNNCRVEVTNNYGIIHVVGANSLVNI 425
           ET     K +  NC  Y +  N  D+ ++GN  R+ + NN G + V+G ++ + I
Sbjct: 44  ETTIYASKDLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKI 98



 Score = 34.3 bits (75), Expect = 4.3
 Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +3

Query: 252 KVTMETNSSLLKVVGNNCVIYVRTNYGDIEVVGNNCRVEV--TNNYGIIHVVGANSLVNI 425
           ++ +  NS  L+V+GN+  + ++ N G ++  GN+ R+ +  ++   ++   G N L+ +
Sbjct: 77  RIRIVNNSGQLQVIGNSTRLKIQNNSGALKYTGNDGRIYLGSSSTQQVVDYTGCNGLLKV 136

Query: 426 NK 431
            K
Sbjct: 137 VK 138


>UniRef50_Q7R728 Cluster: Putative uncharacterized protein PY07761;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07761 - Plasmodium yoelii
           yoelii
          Length = 410

 Score = 37.9 bits (84), Expect = 0.35
 Identities = 18/28 (64%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 392 PRCGRKQPCEHQQTLERRQRSA-PRGEL 472
           P CGR +P  H Q LERRQ+SA PRG L
Sbjct: 294 PVCGRDRPLRHPQFLERRQQSAVPRGRL 321


>UniRef50_Q1GM45 Cluster: Sensor protein; n=1; Silicibacter sp.
           TM1040|Rep: Sensor protein - Silicibacter sp. (strain
           TM1040)
          Length = 757

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 24/69 (34%), Positives = 35/69 (50%)
 Frame = +3

Query: 369 VTNNYGIIHVVGANSLVNINKRWRGDSVQLLGANCRLIVAGKLMSAPSYEAQLSPSSTDL 548
           VT N     VVG  +L +I KR   D   ++GA     V  +L+S P YE +L  +   +
Sbjct: 178 VTRNREKGSVVGPPTLRSI-KRLVNDDGAVIGAVVINAVLSELLSVPEYEGELGRTYYVI 236

Query: 549 DDVIEPIFP 575
            + +EP FP
Sbjct: 237 QNHVEPAFP 245


>UniRef50_Q9VB07 Cluster: CG12880-PA; n=2; Sophophora|Rep:
           CG12880-PA - Drosophila melanogaster (Fruit fly)
          Length = 330

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 399 VGANSLVNINKRWRGDSVQLLGANCRLIVAGKLMSAPSYEAQLSPSSTDLDDV 557
           VG +  +N+   W G +  LLG  C L +A  +  A +  A  +P+++   DV
Sbjct: 6   VGKHKFINMRPSWMGTAAWLLGLYCLLCIAAMVEGASNSVALAAPTASAAKDV 58


>UniRef50_UPI0000DC002A Cluster: Neurabin-1 (Neurabin-I) (Neural
           tissue-specific F-actin-binding protein I) (Protein
           phosphatase 1 regulatory subunit 9A) (p180) (PP1bp175).;
           n=2; Rattus norvegicus|Rep: Neurabin-1 (Neurabin-I)
           (Neural tissue-specific F-actin-binding protein I)
           (Protein phosphatase 1 regulatory subunit 9A) (p180)
           (PP1bp175). - Rattus norvegicus
          Length = 625

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = -2

Query: 582 SRMGKSVQ*RRPGPCWMATVGLRRTGLTSASPQRSAYNS 466
           SR G+SV+ RR G       G  RT L SASP R+AY +
Sbjct: 6   SRPGRSVRGRRAGGGAAGARGRERTTLRSASPHRNAYRT 44


>UniRef50_Q26CI3 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 815

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 264 ETNSSLLKVVGNNCVIYVRTNYGDIEVVGNNCRVEVTNNYGII 392
           E N+ L+K+  +N V+  +     I+VV NN +VE++N  G I
Sbjct: 524 EKNNKLIKIEYDNLVVLNKNTIAWIKVVNNNPQVEISNRAGEI 566


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,244,455
Number of Sequences: 1657284
Number of extensions: 12234742
Number of successful extensions: 32550
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32496
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)