Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B02
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   4.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 175 LTTIFKLKFKLEHMLLCTGYK 113
           ++ + KL  KL+HML+   YK
Sbjct: 108 ISKLHKLDNKLKHMLIWKSYK 128


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 305 AVVSDYFQKTRVRLHCHFSIVTNKIIVII 219
           AVV DYF++          ++T K+  ++
Sbjct: 141 AVVLDYFERLGANQELSLELITRKLATLM 169


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 326 ISTNINDAVVSDYFQKTRVRLHCHFSIVTNKIIVII 219
           +S NI      +YF+  +  L   F   T   IVI+
Sbjct: 336 VSANIVHITAGNYFEINKATLCGIFGTTTTYFIVIL 371


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 326 ISTNINDAVVSDYFQKTRVRLHCHFSIVTNKIIVII 219
           +S NI      +YF+  +  L   F   T   IVI+
Sbjct: 336 VSANIVHITAGNYFEINKATLCGIFGTTTTYFIVIL 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,044
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)