Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B02
         (901 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        30   10.0 
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    30   10.0 

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +2

Query: 413  PCEHQQTLERRQRSAPRGEL*ADRCGEADVSPVLRSPTVAIQHGPGRRY 559
            P E     E  +++A   EL    C E   SP L S   A+  GP R Y
Sbjct: 1024 PIEDASPTEELRQAAEMEELHRSSCSEYSPSPSLDSEAEALDGGPSRLY 1072


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +2

Query: 413  PCEHQQTLERRQRSAPRGEL*ADRCGEADVSPVLRSPTVAIQHGPGRRY 559
            P E     E  +++A   EL    C E   SP L S   A+  GP R Y
Sbjct: 1099 PIEDASPTEELRQAAEMEELHRSSCSEYSPSPSLDSEAEALDGGPSRLY 1147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,252,441
Number of Sequences: 237096
Number of extensions: 1760212
Number of successful extensions: 3180
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3178
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)