Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B01
(867 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 33 1.0
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 33 1.0
Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory eleme... 33 1.0
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 33 1.0
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 33 1.0
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 33 1.0
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 33 1.0
AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory ele... 33 1.0
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 31 7.2
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 31 7.2
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 7.2
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 7.2
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 7.2
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 7.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 7.2
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.2
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.2
AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens ... 30 9.5
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 710 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 540
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 539 AYGKTPANAAFLR 501
TPA AA ++
Sbjct: 1035 KSKITPAMAARIK 1047
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -2
Query: 719 SATLPEGRKAXQ--VSGKRQGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 546
S+TL + R + + G +GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620
Query: 545 GGAYGKTP 522
G + +P
Sbjct: 621 GSSVPPSP 628
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -2
Query: 719 SATLPEGRKAXQ--VSGKRQGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 546
S+TL + R + + G +GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621
Query: 545 GGAYGKTP 522
G + +P
Sbjct: 622 GSSVPPSP 629
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 587 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 639
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 587 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 639
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 576 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 628
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 536 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 694
R R P + R S R +P RY PP SP P P P PP
Sbjct: 576 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 628
>AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ16779 fis, clone BRHIP3038037. ).
Length = 205
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 721 KAPRFPKGERRXRYPVSGRGRNRRAHEGASR 629
+AP P G RR R+ + + R RRA G SR
Sbjct: 85 RAPGAPGGSRRGRHSPAEKRRGRRARSGRSR 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,563,903
Number of Sequences: 237096
Number of extensions: 2659143
Number of successful extensions: 8518
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8508
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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