Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B01
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    30   2.5  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    30   2.5  
AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical...    30   2.5  
U41746-5|AAT81186.1|  492|Caenorhabditis elegans Innexin protein...    28   7.5  
U41746-4|AAA83332.1|  559|Caenorhabditis elegans Innexin protein...    28   7.5  
AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 694 FLPSGSVALSHS-SRCRYLSSVXVVRSKLGCVHEPPVQPXRXALSGTXVLSXPG 852
           F+   S+A+  S  RC+ L+++ V   KL  V +P +Q  +  +        PG
Sbjct: 709 FIRDQSIAVDQSLRRCKALANIMVTMKKLAMVQDPSIQRRKKHVERADSAGAPG 762


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 694 FLPSGSVALSHS-SRCRYLSSVXVVRSKLGCVHEPPVQPXRXALSGTXVLSXPG 852
           F+   S+A+  S  RC+ L+++ V   KL  V +P +Q  +  +        PG
Sbjct: 608 FIRDQSIAVDQSLRRCKALANIMVTMKKLAMVQDPSIQRRKKHVERADSAGAPG 661


>AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.10 protein.
          Length = 986

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 592 KPDRTIKIPGVSPWKLPRALSCSDPCRLPD 681
           K   +I +PGV   ++    S  DPC LPD
Sbjct: 220 KNHSSIHVPGVGDMRISNVTSLPDPCPLPD 249


>U41746-5|AAT81186.1|  492|Caenorhabditis elegans Innexin protein
           10, isoform b protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 553 VRGAEPMEKRQQTRPFYGSWPFAGLLLTCSFLRYPLILW 437
           V G +  EKRQ+   +Y   PF  LLL  +  R P +LW
Sbjct: 85  VAGLQSDEKRQRKISYYQWVPFF-LLLEAACFRLPSLLW 122


>U41746-4|AAA83332.1|  559|Caenorhabditis elegans Innexin protein
           10, isoform a protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 553 VRGAEPMEKRQQTRPFYGSWPFAGLLLTCSFLRYPLILW 437
           V G +  EKRQ+   +Y   PF  LLL  +  R P +LW
Sbjct: 85  VAGLQSDEKRQRKISYYQWVPFF-LLLEAACFRLPSLLW 122


>AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical
           protein Y44E3A.4 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -2

Query: 827 PDKAHRSG*TGGSCT-QPSLERTTYTELRYLQREL*ESATLPEGRKAXQVSGKRQGSEQE 651
           PD+  RS  TG S T +PS++ +   ++  LQ      A  P+ R    V  + + S+ E
Sbjct: 368 PDQRDRSS-TGESTTGEPSIDNSATDQVAELQHITKNRARPPKNRPMSMVMNRNRSSD-E 425

Query: 650 SARGSFQGET 621
           S  G     T
Sbjct: 426 SPNGRLSSPT 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,573,920
Number of Sequences: 27780
Number of extensions: 371444
Number of successful extensions: 1015
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)