Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_A22
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 50 2e-06
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 50 2e-06
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 47 2e-05
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 33 0.37
U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical pr... 31 0.85
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 31 0.85
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 31 1.5
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 30 2.0
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 30 2.6
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 30 2.6
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 3.4
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 3.4
AL022274-2|CAA18358.1| 329|Caenorhabditis elegans Hypothetical ... 29 3.4
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 4.5
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 29 4.5
Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 7.9
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 7.9
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 7.9
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 7.9
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 7.9
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 7.9
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 28 7.9
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 28 7.9
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +1
Query: 580 TVEEVCSSFGLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKV 735
T EEVC++ GLTDV+ Y + +++ ++ K F ++P +++ NP VSK+
Sbjct: 81 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKM 132
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +1
Query: 580 TVEEVCSSFGLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKV 735
T EEVC++ GLTDV+ Y + +++ ++ K F ++P +++ NP VSK+
Sbjct: 81 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKM 132
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 580 TVEEVCSSFGLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKV 735
T E+ ++ GLTDVD+ Y +++++T K F V+P ++K NP V+K+
Sbjct: 83 TSAEISAAIGLTDVDVDYEQEEFQSITNLKNFSSLVKPYILKVNPGTNVTKM 134
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 580 TVEEVCSSFGLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKV 735
T E+ ++ GLTDVD+ Y +++++T K F V+P ++K NP V+K+
Sbjct: 83 TSAEISAAIGLTDVDVDYEQEEFQSITNLKNFSSLVKPYILKVNPGTNVTKM 134
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 580 TVEEVCSSFGLTDVDIQYADADYENLTTYKLFQQHVRPMLVKENPKVPVSKV 735
T E+ ++ GLTDVD+ Y +++++T K F V+P ++K NP V+K+
Sbjct: 83 TSAEISAAIGLTDVDVDYEQEEFQSITNLKNFSSLVKPYILKVNPGTNVTKM 134
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 222 SFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
S A DE VEE E ++++S DSD++ E+E+
Sbjct: 207 SDAADESVEEEEEEDEDSDDSDDSDDSEEEE 237
>U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical
protein C01B7.1a protein.
Length = 935
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 195 MASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDEDYSPXRW 332
+ D+EV+ + E E+GEG D+ G+ +E P S +W
Sbjct: 710 LGEDDEVEHE--QEHEDEDGEGDEDDDGEGEETTPITSSKSSKKKW 753
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 186 VI*MASDEEVDGSFAGDEEVEEGE-GQNDNSGDSDEAPPKEDEDYS 320
VI + SD E + G+E+ + GE + ++ DSDE ++D D S
Sbjct: 30 VIILDSDTEPEDGAGGEEDEDNGEDSEEEDEEDSDEEESEDDSDSS 75
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSD--EAPPKEDEDYS 320
DEEVD A DEE EE +G+ D S D + E K +ED+S
Sbjct: 1438 DEEVDED-ASDEE-EEVDGEEDESDDEENIELIEKSEEDHS 1476
>Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical
protein F33H2.3 protein.
Length = 229
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +3
Query: 207 EEVDGSFAGD--EEVEEGEGQNDNSG----DSDEAPPKEDEDYSP 323
EEV+ FAG+ E+ EEG G D G + + E +DY+P
Sbjct: 154 EEVEEEFAGEGGEDSEEGSGDEDGPGLSYLEKSQFSDDETDDYAP 198
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
DE DG DEE EE G+ + G +EA +E+E+
Sbjct: 252 DESADGQEGEDEE-EEDMGEEEEDGVEEEAEGEEEEE 287
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
DE DG DEE EE G+ + G +EA +E+E+
Sbjct: 251 DESADGQEGEDEE-EEDMGEEEEDGVEEEAEGEEEEE 286
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
DE DG DEE EE G+ + G +EA +E+E+
Sbjct: 251 DESADGQEGEDEE-EEDMGEEEEDGVEEEAEGEEEEE 286
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
DEE + DEE EE E + + D DE +E ++
Sbjct: 588 DEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 624
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
DEE + DEE EE E + + D DE +E ++
Sbjct: 598 DEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 634
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDEDY 317
DE+ D DE+ EE E D D D +++E+Y
Sbjct: 880 DEDEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEY 917
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDEDY 317
DE+ D DE+ EE E D D D +++E+Y
Sbjct: 880 DEDEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEY 917
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 186 VI*MASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
VI + +DEEV +EE ++ G ++ D +E P +D+D
Sbjct: 1763 VIDLENDEEVLEDEMDEEEDDDSFGNDEEFEDEEEIPEDDDDD 1805
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 186 VI*MASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
VI + +DEEV +EE ++ G ++ D +E P +D+D
Sbjct: 1768 VIDLENDEEVLEDEMDEEEDDDSFGNDEEFEDEEEIPEDDDDD 1810
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 207 EEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDE 311
EE DG F + +GEG D++ D+D A K+ E
Sbjct: 373 EEDDGFFVPPCYLSDGEGDEDSTSDNDIAGDKKKE 407
>AL022274-2|CAA18358.1| 329|Caenorhabditis elegans Hypothetical
protein H24D24.2 protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 631 YADADYENLTTYKLFQQHVRPML 699
Y D+DYEN + FQQ +RP+L
Sbjct: 11 YEDSDYENSKFWDDFQQAIRPVL 33
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKE---DEDYS 320
+E V+ F DEE ++G N+ GDS+E +E D DY+
Sbjct: 194 NEGVNVQFDSDEEEDDGGMVNEIKGDSEEESEEEEGVDTDYT 235
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
+EE D + E E+ + +DN D D+ +EDED
Sbjct: 31 EEEEDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDED 67
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
+E+ D ++E E+ + ND+ D DE EDE+
Sbjct: 33 EEDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEE 69
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 204 DEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
DEE + +EE E+ + D+ D DE +E+ED
Sbjct: 29 DEEEEEDEDEEEENEDEDEDEDDDNDDDEDDDEEEED 65
>Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical
protein T24B8.3b protein.
Length = 104
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 198 ASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
A DEE + DE+ EGEG+ ++G+ +E +DED
Sbjct: 59 ADDEEDE---VNDEDSSEGEGEGSDAGEGEEG-SGDDED 93
>Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical
protein T24B8.3a protein.
Length = 105
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 198 ASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
A DEE + DE+ EGEG+ ++G+ +E +DED
Sbjct: 60 ADDEEDE---VNDEDSSEGEGEGSDAGEGEEG-SGDDED 94
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 195 MASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDED 314
M D+E DG D+E +E +D D DE +DED
Sbjct: 842 MEDDDEDDGDMDDDDEDDEDAEDDDEVDDDDE---DDDED 878
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 224 GREEEEEGAEEDEQSGEKD---PEEEEDDS 250
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 222 GREEEEEGAEEDEQSGEKD---PEEEEDDS 248
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 224 GREEEEEGAEEDEQSGEKD---PEEEEDDS 250
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 224 GREEEEEGAEEDEQSGEKD---PEEEEDDS 250
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 222 GREEEEEGAEEDEQSGEKD---PEEEEDDS 248
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 224 GREEEEEGAEEDEQSGEKD---PEEEEDDS 250
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 204 LMPFRLLSNTTWNKMIDFWLEKI 136
LMP+ ++S TW++++ WLE I
Sbjct: 539 LMPYDVISLETWSRVMPRWLEAI 561
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 204 LMPFRLLSNTTWNKMIDFWLEKI 136
LMP+ ++S TW++++ WLE I
Sbjct: 539 LMPYDVISLETWSRVMPRWLEAI 561
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 204 LMPFRLLSNTTWNKMIDFWLEKI 136
LMP+ ++S TW++++ WLE I
Sbjct: 532 LMPYDVISLETWSRVMPRWLEAI 554
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 231 GDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
G EE EEG +++ SG+ D P+E+ED S
Sbjct: 224 GREEEEEGAEEDEQSGEKD---PEEEEDDS 250
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 174 LCLIVI*MASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
LC +V A+D+ + GSF E E ND++ S PP Y+
Sbjct: 11 LCAVVAVRAADDSLIGSFKTMFFGNEPEKTNDSATSSQNNPPISYHQYA 59
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 174 LCLIVI*MASDEEVDGSFAGDEEVEEGEGQNDNSGDSDEAPPKEDEDYS 320
LC +V A+D+ + GSF E E ND++ S PP Y+
Sbjct: 11 LCAVVAVRAADDSLIGSFKTMFFGNEPEKTNDSATSSQNNPPISYHQYA 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,169,233
Number of Sequences: 27780
Number of extensions: 302763
Number of successful extensions: 1581
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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