Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_A21
(921 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.014
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.025
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.033
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.100
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 28 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.9
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 729 PXXXPXXPPGGXPPGXPPXXPPPXPXXXXPPXPPP 833
P P PP G PP PPP PP PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXX---PPPXPXXXXPPXPPP 833
P PP P P PPP P PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +2
Query: 473 PPXPPXXXSPXPGXXPXXXXXXXXXGGXXVVPXXXXXPXXKPXXPPGPXXXGGXXXGXXX 652
PP PP P P P VP P PP P G
Sbjct: 733 PPPPPAVIVPTPAPAPIP------------VPPPAPIMGGPPPPPPPPGVAGAG------ 774
Query: 653 XPXPPXPPPP 682
P PP PPPP
Sbjct: 775 -PPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGX------PXXXPXXPPGGXPPGXPPXXPPPXP--XXXXP 818
PP PPP P G P P P PP PP PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 819 PXPP--PXAXP 845
P PP P A P
Sbjct: 448 PLPPSAPIAPP 458
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPP-GXPPXXPPPXPXXXXPPXPPP 833
PP PPP A P G P PP P G P PP PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPP--PPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPX--GGXPXXXPXXPPGGXPPGXPPXXPPPXPXXXXPPXPPPX 836
PP PP P G P P P P P P P P PPP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 837 AXP 845
P
Sbjct: 480 PAP 482
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPP--GXPPXXPPPXPXXXXPPXPPPX 836
PP PPP G P PP PP P P PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP---PPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 837 AXP 845
+ P
Sbjct: 368 SAP 370
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXP--PXXPPPXPXXXXPPXPPPX 836
PP PP P P PP P G P P PP P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP--LPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Query: 837 A 839
A
Sbjct: 486 A 486
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPPPXPXXXXPPXPPP 833
PP PPP P P PP G PP PP PPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPP---PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +3
Query: 645 PXXRXXPPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPP 794
P PP PP + + P P P PP PP PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERV-PSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 1/62 (1%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPP-PXPXXXXPPXPPPXA 839
PP P P P P P P P PP P PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 840 XP 845
P
Sbjct: 475 AP 476
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXXPPPXPXXXXPPXPPP 833
P PP P PP P PP PPP
Sbjct: 230 PPIPPS-IPSSRPPERVPSLSAPAPPPIPPP 259
Score = 26.6 bits (56), Expect = 4.9
Identities = 23/88 (26%), Positives = 23/88 (26%), Gaps = 1/88 (1%)
Frame = +2
Query: 437 PPXGXGXXFXGXP-PXPPXXXSPXPGXXPXXXXXXXXXGGXXVVPXXXXXPXXKPXXPPG 613
PP G P P PP P P G P P P PP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL----PPSAPIAPPL 459
Query: 614 PXXXGGXXXGXXXXPXPPXPPPPXXXXP 697
P G P P PPP P
Sbjct: 460 P---AGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPPPXPXXXXPPXPPPXA 839
P PP L + P P P P P PP P PP P A
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXXPPPXPXXXXPPXPPP 833
P P P PP PP PP PP
Sbjct: 242 PERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.025
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = +3
Query: 606 PRAPXXXGXXXXGPXXRXXPPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPP- 782
P P G PP P P G P G P P PP PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK--PAAGVP---PVPPPSEAPPVPKPS 1204
Query: 783 -XXPPPXPXXXXPPXPPPXA 839
PP P PP P P A
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSA 1224
Score = 33.1 bits (72), Expect = 0.057
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 7/87 (8%)
Frame = +3
Query: 606 PRAPXXXGXXXXGPXXRXXPPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPX 785
P P G PP P P G P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 786 XPP-------PXPXXXXPPXPPPXAXP 845
PP P P PP PPP P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 32.7 bits (71), Expect = 0.075
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = +3
Query: 615 PXXXGXXXXGPXXRXXPPXPPPL--GGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXX 788
P G GP P PPPL P P P P P P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLAR 1010
Query: 789 PPPXP--XXXXPPXPPPXA 839
PP P PP P P A
Sbjct: 1011 VPPVPKLSSKAPPVPLPSA 1029
Score = 32.3 bits (70), Expect = 0.100
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = +3
Query: 645 PXXRXXPPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPP-PXPXXXXPP 821
P PP P GA P P G P P PP P P PP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 822 XPPP 833
P P
Sbjct: 1104 VPKP 1107
Score = 32.3 bits (70), Expect = 0.100
Identities = 22/80 (27%), Positives = 22/80 (27%)
Frame = +3
Query: 606 PRAPXXXGXXXXGPXXRXXPPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPX 785
P P P PP P P G P PP P G PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 786 XPPPXPXXXXPPXPPPXAXP 845
P P PP P P P
Sbjct: 1124 ---PKPSVAAPPVPVPSGAP 1140
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXP-PGGXPPGXPPXX---PPPXPXXXXPPXPP 830
P PPP+ P P P P P G PP P P P P PP P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPA---PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA 1116
Query: 831 PXAXP 845
P P
Sbjct: 1117 PSGAP 1121
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXX---PPPXPXXXXPPXPPP 833
PP PPP + P G P P PP PP P P P P PP P P
Sbjct: 1189 PPVPPP---SEAPPVPKPSVGVP---PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPPPXPXXXXPPXPPPXA 839
PP P P G P PP PP P P P P PP P P A
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV-PPPSTAP--PVPTPSAGLPPVPVPTA 1234
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +1
Query: 481 PPAXGLSGXXPXAXXXXXXXXPXGXXGGPPRXGXPXXKTXXXPGPXXGRGXGXXXXXXAX 660
PP SG P G PP P P P G A
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPP---VPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Query: 661 XPXAPPPXXXPP 696
P PPP PP
Sbjct: 1188 VPPVPPPSEAPP 1199
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.033
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 765 PPGXPPXXPPPXPXXXXPPXPPPXAXP 845
PPG PP PPP P P PPP P
Sbjct: 5 PPGNPP-PPPPPPGFEPPSQPPPPPPP 30
Score = 32.7 bits (71), Expect = 0.075
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 714 PXGGXPXXXPXXPPGGXPPGXPPXXPPP 797
P G P P PPG PP PP PPP
Sbjct: 5 PPGNPPPPPP--PPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 750 PPGGXPPGXPPXXPPPXPXXXXPPXPPP 833
PPG PP PP P P PP PPP
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.100
Identities = 28/106 (26%), Positives = 28/106 (26%), Gaps = 1/106 (0%)
Frame = -1
Query: 753 GXXGAXXGGXPPXGXPPXXGXXXXGGGGXGGXGXXXX-PXXXPPXXXGPGGXXGFXXGXX 577
G G GG GGG GG G P P G GG G
Sbjct: 162 GLGGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG 221
Query: 576 XXXGTTXXPPXXXXXXXXXGXXPGXGEXXXGGXGGXPKXXXPXPXG 439
G P G PG GG GG P P G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 30.7 bits (66), Expect = 0.30
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = -3
Query: 832 GGGXGGXXXXGXGGGXXGGXPGGXPPGGXXGXXXGXPP--XGXXXXXXXAPPR-GGGXGG 662
GGG GG G G GG G G G G P G P GGG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 661 XXRXXGPXXXXPXXXGARG 605
G P G G
Sbjct: 254 FGGGPGGFGGGPGGHGGPG 272
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 844 GXAXGGGXGGXXXXGXGGGXXGGXPGGXPPGGXXGXXXGXP 722
G GG GG G G G GG GG GG G G P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGF--GGGPGGFGGGP 265
Score = 26.2 bits (55), Expect = 6.5
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -3
Query: 826 GXGGXXXXGXGGGXXGGXPGGXPPGGXXGXXXGXPPXGXXXXXXXAPPRGGGXGGXXRXX 647
G G G GGG G PG PGG G G G GGG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPG---PGG-FGGFGGFGGEGHHHGGHGG--FGGGPGGFEGGP 237
Query: 646 GPXXXXPXXXG 614
G P G
Sbjct: 238 GGFGGGPGGFG 248
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXXPPPXPXXXXPP--XPPPXAXP 845
P P PP PPP P PP PP A P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXXPPPXPXXXXPPXPPP 833
P PP P G P PPP P P P P
Sbjct: 1718 PSAPP--MPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Frame = +2
Query: 656 PXPPXP----PPPXXXXPXXGGXPXGGXPPXXAPXXP 754
P PP P PPP P G P PP A P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXXPP-PXPXXXXPPXPPP 833
P PP PP PP PP P PP P P
Sbjct: 1707 PPPPPMSVPP--PPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 768 PGXPPXXPPPXPXXXXPPXPPPXAXP 845
P PP PP P P PP A P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 741 PXXPPGGXPPGXPPXXPPPXPXXXXPPXPPPXAXP 845
P PP PP P P P PP PP P
Sbjct: 1705 PTPPP---PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 802 GXGGGXXGGXPGGXPPGGXXGXXXG 728
G GG GG PGG P G G G
Sbjct: 613 GAPGGAPGGMPGGAPGGAPGGADNG 637
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 817 GXXXXGXGGGXXGGXPGGXPPGGXXG 740
G G GG GG PGG P G G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 793 GGXXGGXPGGXPPGGXXGXXXG 728
GG GG PGG P G G G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGG 633
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 829 GGXGGXXXXGXGGGXXGGXPGGXPPG 752
GG G G GG GG PGG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 781 GGXPGGXPPGGXXGXXXGXPPXG 713
GG PGG PGG G G P G
Sbjct: 612 GGAPGG-APGGMPGGAPGGAPGG 633
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 832 GGGXGGXXXXGXGGGXXGGXPGGXPPGGXXGXXXG 728
GGG GG G GG G G GG G G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPPPXP 803
PP PPPL G P PP PPP P
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 832 GGGXGGXXXXGXGGGXXGGXPG 767
GGG GG G GG GG G
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 663 PPXPPPLGGAXXXXXXXPXGGXPXXXPXXPPGGXPPGXPPXXPPPXPXXXXPPXPPPXAX 842
PP PPP P P PP P P P PP PPP
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVSPE--IPPTYTPKQADPLPA---PPPPPPPTL 246
Query: 843 P 845
P
Sbjct: 247 P 247
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 656 PXPPXPPPP 682
P PP PPPP
Sbjct: 236 PAPPPPPPP 244
Score = 20.6 bits (41), Expect(2) = 9.7
Identities = 8/25 (32%), Positives = 8/25 (32%)
Frame = +2
Query: 605 PPGPXXXGGXXXGXXXXPXPPXPPP 679
PP P PP PPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,553,446
Number of Sequences: 5004
Number of extensions: 20830
Number of successful extensions: 266
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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