Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_A19
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44...    31   1.3  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   5.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   5.1  
02_05_0691 - 30949234-30949243,30949613-30950001,30950425-309504...    29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  

>10_01_0038 +
           437738-438122,439215-439501,440111-440375,440687-440784
          Length = 344

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 28/88 (31%), Positives = 36/88 (40%)
 Frame = -3

Query: 660 RAHEGAFQGETPGXFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGXWPFAGLLL 481
           R H+  F G   G    L G +   LS      R GGG     P+TR   G     G + 
Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRGGGGDDSALPSTRS-GGKGDSGGSVA 271

Query: 480 TCSFLRYPLILWITVLPPLSELIPLAAA 397
           T S  R  +     + PPLS LI +A +
Sbjct: 272 TASPHRLQMAGNPRLSPPLSPLISIAGS 299


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 546 LRPPDEHHKNRRSSQRWRN--PTGL*XYQAFPPGKLPRALSCXRPCXXTGIPVRLSPXR 716
           L PP          Q+WR+  PTG   + +FP G LP A    +P         L P R
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPSR 71


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 358 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPXTV 513
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>02_05_0691 -
           30949234-30949243,30949613-30950001,30950425-30950449,
           30950594-30950688,30950842-30951359,30951652-30951736,
           30951842-30952633
          Length = 637

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 472 RTCEQKASKRPXTVKRPRCWRFXIGSAPLTSITKIDAQVRGGETRQDYKXTR-RFPLESS 648
           RT   +A      +  P+ WR    S   +S +  D +     +R  YK  R +F ++  
Sbjct: 542 RTSNSEAHVNSCCILNPKFWRRHDASRYSSSFSVSDGRNSSEGSRTSYKWGRQKFGVQGG 601

Query: 649 LVRSPVXDP 675
            V +P+ +P
Sbjct: 602 FVTNPLAEP 610


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 307 NESAN---ARGEAVCVLGALPLPRSLTRCAR 390
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,901,821
Number of Sequences: 37544
Number of extensions: 354424
Number of successful extensions: 812
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)