Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_A15
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0183 + 28251548-28252009,28252172-28252594                       29   3.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  
01_07_0113 + 41158666-41159615,41159695-41160076                       28   8.4  

>05_07_0183 + 28251548-28252009,28252172-28252594
          Length = 294

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 736 CRYLSSGVGRSPPSWAVCTXPPVHPGP 816
           CR L+S V RS    A C  PP HP P
Sbjct: 44  CRALASSVDRSIRLAASCFPPPEHPPP 70


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>01_07_0113 + 41158666-41159615,41159695-41160076
          Length = 443

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = +1

Query: 733 RCRYLSSG---VGRSPPSWAVCTXPPVHP 810
           RCRY+  G    GR P S   CT  P +P
Sbjct: 96  RCRYVDGGWFWAGREPGSRCACTAHPFNP 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,855,542
Number of Sequences: 37544
Number of extensions: 423529
Number of successful extensions: 1172
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)