Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_A09
(970 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.011
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.046
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.24
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.32
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.43
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.98
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.98
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 1.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.3
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.3 bits (85), Expect = 0.002
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = +3
Query: 372 GXXXGXFXGXGEXXXXXEGWXGXGGXGGGGXRXGG---LXPGARVXEXGXLGXGGGXXGI 542
G G G G G+ G GG GG G GG G E G G GGG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 543 XSLXGGNRGXXXSXGXXRGXH 605
GG G G G H
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGH 268
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +3
Query: 384 GXFXGXGEXXXXXEGWXGXGGXGGGGXRXGGLXPGARVXEXGXLGXGGGXXGIXSLXGGN 563
G F G G G GG GGG GG G G G GGG G GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGG---PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGF 261
Query: 564 RGXXXSXG 587
G G
Sbjct: 262 GGGPGGHG 269
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 GXFXGXGEXXXXXEGWXGXGGXGGG-GXRXGGLXPGARVXEXGXLGXGGGXXGIXSLXGG 560
G F G G G G GG GG GG G G G GGG G GG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Query: 561 NRG 569
+ G
Sbjct: 268 HGG 270
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = -1
Query: 568 PRXPPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXP--PPPXPPXPXHPSXXXXXSPXP 395
P PPL PP P P AP PP P P P P P P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 394 XNXPXXXP 371
P P
Sbjct: 461 AGMPAAPP 468
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 568 PRXPPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHP 425
P PPL P PP P AP P PPP P P P
Sbjct: 444 PAAPPLPPSAPIAPP----LPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.43
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSP-XPXNXP 383
PPLS PP P AP P PP P PS P P + P
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Query: 382 XXXP 371
P
Sbjct: 437 PSLP 440
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/97 (24%), Positives = 27/97 (27%)
Frame = -1
Query: 661 APPXAAXXRXXXXXGLXXTXSPLXXPXLXWXPRXPPLSEXXPXXPPPXPRXPXSXTRAPG 482
APP A R S P + P PP + P PP P A
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP--PSLPPSAPPSLPMGAPAAP 447
Query: 481 XSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXPXXXP 371
PP PP P +P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 526 PPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSP 401
PP P P S PP PP PP PS P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAP---GXSPPXRXPPPPXPPXP 434
PP P PPP PR S R P S PP P P P
Sbjct: 354 PPQGRSAP--PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 526 PPXPRXPXSXTRAPGXSPPXRXPPPPXPP 440
PP P P S A + + PPPP PP
Sbjct: 290 PPLP-PPSSRVSAAALAANKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 538 PXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPP 440
P PPP R S PPPP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 556 PLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
P S P PP P R P S P PPP PP S P P
Sbjct: 224 PTSTSAPPIPPSIPSS-RPPERVPSLSAPA--PPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXR---XPPPPXPPXPXHP 425
PP+ P PP S P PP PP PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 25.8 bits (54), Expect = 9.2
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = -1
Query: 598 PLXXPXLXWXPRXPPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXP---PPPXPP--XP 434
PL P PP + P P S T P P P PP PP P
Sbjct: 378 PLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Query: 433 XHPSXXXXXSPXPXNXPXXXP 371
P P P + P P
Sbjct: 438 SLPMGAPAAPPLPPSAPIAPP 458
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.046
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXP 383
PP P P P P P PP P P P PS P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = -1
Query: 565 RXPPLSEXXPXXPPPXPRX-PXSXTRAPGXSPPXRXPPPPXP--PXPXHPSXXXXXSPXP 395
R P + P PPP P P ++AP P PPP P P PS S P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKAPPI--PSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 394 XNXPXXXP 371
P P
Sbjct: 196 PMPPKVPP 203
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -1
Query: 529 PP--PXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXP 383
PP P P P S R P +PP PPP P P P P + P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASA--PPIPSKAPPIPSSLP 172
Score = 30.3 bits (65), Expect = 0.43
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = -1
Query: 568 PRXPPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXP---PXPXHPSXXXXXSPX 398
P P P PP P P +P +PP PP P P P P+ P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPP---SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 397 PXNXPXXXP 371
+ P P
Sbjct: 187 APSLPSAVP 195
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 559 PPLSEXXPXXPP--PXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHP 425
PP+ P P P P P + ++P +P PP PP P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = -1
Query: 556 PLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXP-PXPXHPS 422
P S P P R P S P PP PP P P PS
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS 169
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -1
Query: 568 PRXPPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
P P S P P P P P +PP PP PP P P+ P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL-PASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 598 PLXXPXLXWXPRXPP-LSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXP 443
P+ P + PP +S P PP P S P PP PPPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPA-GPPS-APPPPLP 1736
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.24
Identities = 23/89 (25%), Positives = 25/89 (28%)
Frame = -1
Query: 661 APPXAAXXRXXXXXGLXXTXSPLXXPXLXWXPRXPPLSEXXPXXPPPXPRXPXSXTRAPG 482
APP + T P+ P P P S P PPP P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTST--PPVPKSSSGAPSAPPPVPAPSSEIPSIPA 1078
Query: 481 XSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
S P P P PS P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 29.9 bits (64), Expect = 0.56
Identities = 19/78 (24%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = -1
Query: 601 SPLXXPXLXWXPRXPPLSEXXPXXPP-PXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHP 425
+P P + PP+ + PP P P AP +PP P PP P
Sbjct: 1078 APSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPS 1137
Query: 424 SXXXXXSPXPXNXPXXXP 371
P P P
Sbjct: 1138 GAPPVPKPSVAAPPVPAP 1155
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
PP+ P P P AP +PP P PP P PS P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA-PSSGIPPVPKP 1184
Score = 29.9 bits (64), Expect = 0.56
Identities = 23/94 (24%), Positives = 25/94 (26%), Gaps = 1/94 (1%)
Frame = -1
Query: 661 APPXAAXXRXXXXXGLXXTXSPLXXPXLXWXPRXPPLSEXXPXXPPPX-PRXPXSXTRAP 485
APP A P+ P P P + P PP P P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 484 GXSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXP 383
PP PP P P P P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/63 (23%), Positives = 17/63 (26%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXPX 380
PP+ P P P P +PP P PP P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 379 XXP 371
P
Sbjct: 1172 PAP 1174
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = -1
Query: 568 PRXPPLSEXXPXXPPPX--PRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
P PP S P P P P +AP P P P PS SP P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/64 (25%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = -1
Query: 559 PPLSEXXPXXPP-PXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXP 383
PP+ PP P P P +PP P PP P + +P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 382 XXXP 371
P
Sbjct: 1229 VPVP 1232
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -1
Query: 559 PPLSEXXPXXPP-PXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXPXNXP 383
PP+ + PP P P + +PP P PP P P+ P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAP 1198
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 553 LSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXP 443
++ P PPP P P G PP + PPPP P
Sbjct: 1 MASLPPGNPPPPPPPP-------GFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 475 PPXRXPPPPXPPXPXHPSXXXXXSP 401
PP PPPP PP PS P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -1
Query: 478 SPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
S P PPPP PP P P P
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.43
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 435 GXGGXGGGGXRXGGLXPGARVXEXGXLGXGGGXXGIXSLXGGNRGXXXSXGXXRG 599
G GG GG GG GAR G G GG G GG G G +G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRG--GARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.98
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXP 434
P +S PP P S P PPPP PP P
Sbjct: 156 PTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 517 PRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
P P + T P + P PPPP PP S P P
Sbjct: 221 PEIPPTYT--PKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/75 (26%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Frame = -1
Query: 559 PPLSEXXPXXPPPXPRXPXSXTRAPGXSP---------PXRXPPPPXPPXPXHPSXXXXX 407
P S P PP R + + A G P P + PPPP PP P +
Sbjct: 180 PTASANAPLPVPPPRRVSQNSSYASGSVPAATAASTASPVKKPPPPAPPKPRRLAARTSS 239
Query: 406 SPXPXNXPXXXPXTV 362
+ + P P V
Sbjct: 240 NSSGVSSPTSVPPPV 254
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 502 SXTRAP--GXSPPXRXPPPPXPPXPXHPSXXXXXSPXP 395
S T+AP G S PPPP PP P + P P
Sbjct: 290 SKTQAPSSGDSANGGLPPPPPPPPPSNDFWKDSNEPAP 327
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = -1
Query: 568 PRXPPL-SEXXPXXP----PPXPRXPXSXTRAPGXSPPXRXPPP 452
PR PPL +E P P PP P P PG P P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 9/54 (16%)
Frame = -1
Query: 559 PPLSEXXPXXP----PPXPRXPXSXTRAPGXSP-PXRXPP----PPXPPXPXHP 425
P L+E P P PP P P PG P P P P PP P P
Sbjct: 92 PLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 529 PPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXP 434
PPP P P PPPP PP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = -1
Query: 601 SPLXXPXLXWXPRXPPLSEXXPXXPPPXPRXPXSXTRAPGXSPPXRXPPPPXPPXPXHPS 422
SP P P P P P P P PG + PPPP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPP-PAPIMGGPPPPPPPPGVAGAG-PPPPPPPPPAVSAG 788
Query: 421 XXXXXSPXPXNXP 383
+P P P
Sbjct: 789 GSRYYAPAPQAEP 801
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,226,591
Number of Sequences: 5004
Number of extensions: 12421
Number of successful extensions: 219
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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