Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_A08
         (936 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119018-1|AAM50878.1|  441|Drosophila melanogaster LP04613p pro...   215   5e-56
AE014297-2811|AAF55777.1|  441|Drosophila melanogaster CG10877-P...   215   5e-56
AE014134-3277|AAF53919.1|  373|Drosophila melanogaster CG9319-PA...    90   5e-18
AY121622-1|AAM51949.1|  290|Drosophila melanogaster GH11368p pro...    51   2e-06
AY121656-1|AAM51983.1|  206|Drosophila melanogaster RE04513p pro...    29   9.2  
AE014297-497|AAF54096.1|  191|Drosophila melanogaster CG2342-PA ...    29   9.2  
AE001572-19|AAD19809.1|  191|Drosophila melanogaster cuticle pro...    29   9.2  

>AY119018-1|AAM50878.1|  441|Drosophila melanogaster LP04613p
           protein.
          Length = 441

 Score =  215 bits (526), Expect = 5e-56
 Identities = 100/169 (59%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
 Frame = +2

Query: 233 LGDLGANVIKVESLS-GXEARKWGPPFMKDCGDSYYFQSVNRNKKSXCIDFKSQEGKKII 409
           L DLGA VIKVE    G EARKWGPPF+K+  D+ YF + NRNK+S CID K   G +++
Sbjct: 70  LADLGAEVIKVERPHFGDEARKWGPPFLKNSNDAAYFLAPNRNKRSICIDIK--RGTQLL 127

Query: 410 YDLAKKCDVLVENFIPGKLDQMDVXYEKLKTVNPKLIYCAITGFGPRGPYTKKPGYDVIA 589
           + LA+  DVLVEN++PG L++  + YE+L+ VNPKLIYC++TG+G  GPY K+PGYDVIA
Sbjct: 128 HRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIYCSMTGYGSVGPYAKRPGYDVIA 187

Query: 590 AAMGGLLHTTGERNGNPVKTGVAITDITTGLHAFGAIMAALYHRNSTGR 736
           +++GGL+H TGER+G P K GVA+TD++TGL+A GAI+AALY R  T R
Sbjct: 188 SSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAILAALYQRTRTQR 236



 Score = 35.9 bits (79), Expect = 0.080
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 85  NFXRXCSKARQISGXXTXEIRQRNXMDYCNDVHVLDLSRIVAGPFCTMTIGRFRRECNK 261
           NF     K          ++ +R+ +   + + +LDLSRI+AGP+CTM +     E  K
Sbjct: 24  NFAAVGDKNNAADNANASDVDERHPL---HGIRILDLSRIIAGPYCTMVLADLGAEVIK 79


>AE014297-2811|AAF55777.1|  441|Drosophila melanogaster CG10877-PA
           protein.
          Length = 441

 Score =  215 bits (526), Expect = 5e-56
 Identities = 100/169 (59%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
 Frame = +2

Query: 233 LGDLGANVIKVESLS-GXEARKWGPPFMKDCGDSYYFQSVNRNKKSXCIDFKSQEGKKII 409
           L DLGA VIKVE    G EARKWGPPF+K+  D+ YF + NRNK+S CID K   G +++
Sbjct: 70  LADLGAEVIKVERPHFGDEARKWGPPFLKNSNDAAYFLAPNRNKRSICIDIK--RGTQLL 127

Query: 410 YDLAKKCDVLVENFIPGKLDQMDVXYEKLKTVNPKLIYCAITGFGPRGPYTKKPGYDVIA 589
           + LA+  DVLVEN++PG L++  + YE+L+ VNPKLIYC++TG+G  GPY K+PGYDVIA
Sbjct: 128 HRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIYCSMTGYGSVGPYAKRPGYDVIA 187

Query: 590 AAMGGLLHTTGERNGNPVKTGVAITDITTGLHAFGAIMAALYHRNSTGR 736
           +++GGL+H TGER+G P K GVA+TD++TGL+A GAI+AALY R  T R
Sbjct: 188 SSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAILAALYQRTRTQR 236



 Score = 35.9 bits (79), Expect = 0.080
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 85  NFXRXCSKARQISGXXTXEIRQRNXMDYCNDVHVLDLSRIVAGPFCTMTIGRFRRECNK 261
           NF     K          ++ +R+ +   + + +LDLSRI+AGP+CTM +     E  K
Sbjct: 24  NFAAVGDKNNAADNANASDVDERHPL---HGIRILDLSRIIAGPYCTMVLADLGAEVIK 79


>AE014134-3277|AAF53919.1|  373|Drosophila melanogaster CG9319-PA
           protein.
          Length = 373

 Score = 89.8 bits (213), Expect = 5e-18
 Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
 Frame = +2

Query: 347 VNRNKKSXCIDFKSQEGKKIIYDLAKKCDVLVENFIPGKLDQMDVXYEKLKTVNPKLIYC 526
           + + K++ C+D K+ +G++ +  L KKCDVL+E F PG ++++++    L T NP+LIY 
Sbjct: 45  LQQGKRTLCLDLKNPKGQQAVQRLVKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYA 104

Query: 527 AITGFGPRGPYTKKPGYDVIAAAMGGLLHTTGERNGNPVKTGVAITDITTG--LHAFGAI 700
            +TGFG  G   ++ G+D+  AA+ G+L   G R+         + D   G  + A G  
Sbjct: 105 RLTGFGQHGRLAQRAGHDINYAALSGVLSMLGRRHEKVTAPINILADFAGGSLMCALGIC 164

Query: 701 MAAL-YHRNSTGR 736
           +A L  HR+  G+
Sbjct: 165 LALLERHRSGKGQ 177


>AY121622-1|AAM51949.1|  290|Drosophila melanogaster GH11368p
           protein.
          Length = 290

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
 Frame = +2

Query: 464 LDQMDVXYEKLKTVNPKLIYCAITGFGPRGPYTKKPGYDVIAAAMGGLLHTTGERNGNPV 643
           ++++++    L T NP+LIY  +TGFG  G   ++ G+D+  AA+ G+L   G R+    
Sbjct: 1   MEKLNLGPTDLCTANPRLIYARLTGFGQHGRLAQRAGHDINYAALSGVLSMLGRRHEKVT 60

Query: 644 KTGVAITDITTG--LHAFGAIMAAL-YHRNSTGR 736
                + D   G  + A G  +A L  HR+  G+
Sbjct: 61  APINILADFAGGSLMCALGICLALLERHRSGKGQ 94


>AY121656-1|AAM51983.1|  206|Drosophila melanogaster RE04513p
           protein.
          Length = 206

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = -1

Query: 708 AAMIAPKACRPVVMSVIATPVFTGFPLRSPVVCNSPPIAAAITSYPGFFVYGPLGPKPVI 529
           AA++A  A  PVV + +A PV    PL +       P+A A    P    Y    P    
Sbjct: 127 AAVVAAPA--PVVRAAVAAPVVRAAPLTTTYAAAPAPLAYAAAPAP--LAYAAPAPVVKA 182

Query: 528 AQYISLGLTVLSFSYXTSIWS 466
           A  ++ G  ++   + + + S
Sbjct: 183 APLVAAGPAIVKTQFASPLIS 203


>AE014297-497|AAF54096.1|  191|Drosophila melanogaster CG2342-PA
           protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = -1

Query: 708 AAMIAPKACRPVVMSVIATPVFTGFPLRSPVVCNSPPIAAAITSYPGFFVYGPLGPKPVI 529
           AA++A  A  PVV + +A PV    PL +       P+A A    P    Y    P    
Sbjct: 112 AAVVAAPA--PVVRAAVAAPVVRAAPLTTTYAAAPAPLAYAAAPAP--LAYAAPAPVVKA 167

Query: 528 AQYISLGLTVLSFSYXTSIWS 466
           A  ++ G  ++   + + + S
Sbjct: 168 APLVAAGPAIVKTQFASPLIS 188


>AE001572-19|AAD19809.1|  191|Drosophila melanogaster cuticle
           protein protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = -1

Query: 708 AAMIAPKACRPVVMSVIATPVFTGFPLRSPVVCNSPPIAAAITSYPGFFVYGPLGPKPVI 529
           AA++A  A  PVV + +A PV    PL +       P+A A    P    Y    P    
Sbjct: 112 AAVVAAPA--PVVRAAVAAPVVRAAPLTTTYAAAPAPLAYAAAPAP--LAYAAPAPVVKA 167

Query: 528 AQYISLGLTVLSFSYXTSIWS 466
           A  ++ G  ++   + + + S
Sbjct: 168 APLVAAGPAIVKTQFASPLIS 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,479,660
Number of Sequences: 53049
Number of extensions: 543476
Number of successful extensions: 1111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)