Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_A06
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   254   6e-68
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    31   0.82 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  254 bits (622), Expect = 6e-68
 Identities = 123/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +3

Query: 219 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 398
           VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 399 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPGAFRCYLDVGLARTTTG 575
           AY+TG                          +YNVE   D  P  F+  LD+GLARTTTG
Sbjct: 98  AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTG 155

Query: 576 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDE 755
           +++F  MKG  DGG+NVPHS  RF G+D ESK++NAE HR  I G HVA+YM  L+++DE
Sbjct: 156 SKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDE 215

Query: 756 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAXRADPSHKXK 875
           D +KRQFSK++  G+ A  + A Y+K H A RAD S   K
Sbjct: 216 DRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAAK 255



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 106 MGFVKVVKNKQYFKRYQVK 162
           MG VKV+KNK YFKRYQVK
Sbjct: 1   MGLVKVIKNKAYFKRYQVK 19



 Score = 35.9 bits (79), Expect = 0.038
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 170 RRREGKTDYYARKRL 214
           RRREGKTDYYARKRL
Sbjct: 22  RRREGKTDYYARKRL 36


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 498 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 674
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 675 F 677
           F
Sbjct: 128 F 128


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 342  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 229
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 342  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 229
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 237 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 356
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,602,495
Number of Sequences: 27780
Number of extensions: 412857
Number of successful extensions: 1011
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)