Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P23
(1232 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 48 2e-05
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 35 0.11
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 34 0.26
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 33 0.46
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 31 1.9
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808... 30 3.3
11_06_0693 - 26334574-26336121 30 3.3
03_02_0325 - 7467862-7468054,7468668-7468752,7469124-7469290,747... 30 3.3
02_05_1214 + 34976814-34979813 30 3.3
09_04_0159 + 15213752-15214028,15214158-15214399 30 4.3
05_04_0098 + 17982196-17982355,17982761-17982978,17983232-179834... 30 4.3
05_02_0100 + 6594787-6594878,6595443-6595728,6595809-6595887,659... 29 5.7
04_03_1017 + 21747044-21748051 29 9.9
03_06_0538 + 34591897-34593703,34595436-34595506,34596328-34598775 29 9.9
>06_03_0510 - 21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 48.0 bits (109), Expect = 2e-05
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 15/221 (6%)
Frame = +2
Query: 416 GENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 592
GE V + +GT G+ + +G ++ PV + LGRI N G+PID PI +
Sbjct: 105 GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 163
Query: 593 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIME---- 760
I + + + +E++ TGI +D++ A + +
Sbjct: 164 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 223
Query: 761 --LINNVAK---AHGGYS-----VFAGVGXRTREGNDLYHEMIESGVISLKDKTSKVALX 910
L+ ++ K A GG VFA +G + E+G +V L
Sbjct: 224 AGLVKSLEKGKHAEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENG------SMERVTLF 277
Query: 911 YGQMNXPPGARARVALTGLTVAEYFRDQKGKDVLLFXXNIS 1033
N P R LT AEY + GK VL+ ++S
Sbjct: 278 LNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMS 318
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 35.1 bits (77), Expect = 0.11
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Frame = +2
Query: 416 GENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 592
GE V + +GT G+ + +G ++ PV + LGR+ N G+PID PI +
Sbjct: 65 GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEA 123
Query: 593 TAAI------HAEAPEFVDMSVQ---QEILVTGIKVVDLL 685
I A A ++ S + +E++ TGI +D++
Sbjct: 124 YLDISDFDIGFAGAGSSINPSERTYPEEMIQTGISTIDVM 163
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 33.9 bits (74), Expect = 0.26
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Frame = +2
Query: 653 LVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGXRTRE 832
L+TG +V+D L P TV I + ++ + + V+ G G R
Sbjct: 246 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV-ISQALSKYSNSEA--VVYVGCGER--- 299
Query: 833 GNDLYHEMIESGVISL-------KDKTSKVALXYGQMNXPPGARARVALTGLTVAEYFRD 991
GN++ +++ +++ + + L N P AR TG+T+AEYFRD
Sbjct: 300 GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD 359
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 33.1 bits (72), Expect = 0.46
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = +2
Query: 653 LVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGXRTRE 832
L+TG +V+D L P TV I + ++ + + V+ G G R E
Sbjct: 232 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV-ISQALSKYSNSQA--VVYVGCGERGNE 288
Query: 833 GNDLYHEMIESGVISLKDKTSKV----ALXYGQMNXPPGARARVALTGLTVAEYFRD 991
++ + + + + + V L N P AR TG+T+AEY+RD
Sbjct: 289 MAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRD 345
>10_08_0584 + 18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 492 PESSTGCPRTKPSVPSMAMVRTVFSPKCCATSKTKRGDRFCTSRAFR 352
P ++ G PR PS P + PKC + G FCT F+
Sbjct: 868 PGATAGRPRLSPSDPEVVGTEAE-CPKCAQLKLLREGAAFCTQDCFK 913
>12_02_0893 +
24077634-24078379,24079347-24080412,24080741-24080866,
24081278-24081384,24081720-24081744
Length = 689
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -3
Query: 558 GSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPSVPSMAMV 433
GSP+ R + AP G+ G+P++ ++PS+P +++
Sbjct: 452 GSPVYAQSRSPIRAPLGVSFGDPKAQ----NSRPSIPHPSLI 489
>11_06_0693 - 26334574-26336121
Length = 515
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 698 WHKERADRRLLYQLRESPAAQTCRQTLEL 612
WH A+RRLL+ L SP A+ R+ LEL
Sbjct: 20 WHPRTAERRLLHLLHHSPPAR--RRPLEL 46
>03_02_0325 -
7467862-7468054,7468668-7468752,7469124-7469290,
7470130-7471133
Length = 482
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -2
Query: 550 DYIDDASEGFSSHRDTNG*ARVEYGLPTD*AFSTVHGNGTYSVLSQVLRHLQDQAGRSI 374
D+ DD +EG + +D +G A + YGL TV G +VL+Q+ + L++ S+
Sbjct: 171 DHEDDDAEGAEAEKDADGEAALSYGL-------TVASKGQEAVLAQLDKVLEEYTTFSV 222
>02_05_1214 + 34976814-34979813
Length = 999
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +1
Query: 637 CAAGDSRNWYKSRRSARSLCQRWKDWVVWRSWCGQNCIDYGTDQQC 774
C A + W ++R S+C RW + W + I G C
Sbjct: 614 CVAKYGQKWIRTRTVVDSVCPRWNEQYTWEVFDPCTVITVGVFDNC 659
>09_04_0159 + 15213752-15214028,15214158-15214399
Length = 172
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +1
Query: 616 SRVCRHVCAAGDSRNW-YKSRRSARSLCQRWKDWVVWRSWCGQN--CIDYGTDQQCCQSP 786
+ R CA D W ++ AR+ +R D + WR C D G+ CC P
Sbjct: 107 AEAARRPCA-DDGGGWTWRRSGPARARARRHGDLLRWRRTLAAQRPCADDGSVGTCCGGP 165
Query: 787 WWLL 798
W L
Sbjct: 166 AWAL 169
>05_04_0098 +
17982196-17982355,17982761-17982978,17983232-17983418,
17983957-17984057,17984708-17984885,17984956-17985233
Length = 373
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 459 PSVPSMAMVRTVFSPKCCATSK 394
P+ PS A VR SP+CC+ S+
Sbjct: 3 PTAPSPASVRAAASPRCCSRSR 24
>05_02_0100 +
6594787-6594878,6595443-6595728,6595809-6595887,
6595964-6596013,6597281-6597478,6597555-6597612,
6598388-6598496,6599253-6599321,6599684-6599812,
6599970-6600082,6600386-6600479,6602827-6602917,
6604145-6604233,6604715-6604856,6605849-6606196,
6606314-6607408
Length = 1013
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 437 IAMDGTEGLVRGQPVLDSGSPIRIPVGAE-TLGRIINVIGEPIDERGPI 580
I D E + P S S +P AE L I NV+GE +D+ GP+
Sbjct: 128 IVPDSEEESLPSSPETSSTSNYDMPDLAEQNLEHIYNVLGEMVDKEGPV 176
>04_03_1017 + 21747044-21748051
Length = 335
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3
Query: 522 SAPTGIRMGEPESSTGCPRTKPSVPSMAMVRTVFSPKCCATSKTKRGDRFCTSRAFRIGG 343
S P R P+ + P + P +PS A TV P+ + R C+SRA R+ G
Sbjct: 266 STPPPPRAASPDYTPSTPPSSP-LPSAAESFTVPPPRRYHPYQRSRSGGACSSRAIRVIG 324
>03_06_0538 + 34591897-34593703,34595436-34595506,34596328-34598775
Length = 1441
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 678 STTFIPVTRISCC--TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGI 505
S+ F+P+ +S TD++T SGA +W VL + IG + + RV +
Sbjct: 152 SSLFLPLYFVSSGLKTDVTTISGAKSWGLLVLVMTTACAGKIGGTVAASLLMRVPLREAL 211
Query: 504 RMG 496
+G
Sbjct: 212 ALG 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,275,702
Number of Sequences: 37544
Number of extensions: 643321
Number of successful extensions: 1835
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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