Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P23
(1232 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 375 e-104
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 66 4e-11
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 66 4e-11
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 46 4e-05
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 44 2e-04
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 42 9e-04
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 36 0.078
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 2.2
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 29 5.1
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 5.1
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 5.1
Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical pr... 29 6.8
AL110484-8|CAB54399.1| 274|Caenorhabditis elegans Hypothetical ... 29 6.8
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 29 8.9
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase subunit
protein 2 protein.
Length = 538
Score = 375 bits (923), Expect = e-104
Identities = 193/294 (65%), Positives = 212/294 (72%), Gaps = 5/294 (1%)
Frame = +2
Query: 164 CRVGRLATKTVVNNATEKASLVTGAAVNKRDYAAKASXXXXXXXXXXXXXXXXXX----- 328
C + + + NN K + TG A + A K S
Sbjct: 24 CALPAASIRLSSNNVESKKGIHTGVATQQAAAATKVSAKATAANASGRIVAVIGAVVDVQ 83
Query: 329 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRI 508
F++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G PI+I
Sbjct: 84 FDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKI 143
Query: 509 PVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLA 688
PVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+QEILVTGIKVVDLLA
Sbjct: 144 PVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLA 203
Query: 689 PYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGXRTREGNDLYHEMIESG 868
PYA TVLIMELINNVAKAHGGYSVFAGVG RTREGNDLYHEMIE G
Sbjct: 204 PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGG 263
Query: 869 VISLKDKTSKVALXYGQMNXPPGARARVALTGLTVAEYFRDQKGKDVLLFXXNI 1030
VI LK K SKV+L YGQMN PPGARARV LTGLTVAEYFRDQ+G+DVLLF NI
Sbjct: 264 VIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNI 317
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 1030 FRFTQAGSKMSALLGRI 1080
FRFTQAGS++SALLGRI
Sbjct: 318 FRFTQAGSEVSALLGRI 334
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 66.5 bits (155), Expect = 4e-11
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 7/218 (3%)
Frame = +2
Query: 401 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 580
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122
Query: 581 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIME 760
+ + + +AP + +E +VTG+K VD L P T + ++
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAID 182
Query: 761 LINNVAKAHGG-------YSVFAGVGXRTREGNDLYHEMIESGVISLKDKTSKVALXYGQ 919
I N + + + ++ VG + + + ++G + S A
Sbjct: 183 TIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAP 242
Query: 920 MNXPPGARARVALTGLTVAEYFRDQKGKDVLLFXXNIS 1033
+ + +G + E+FRD GK L+ ++S
Sbjct: 243 L------QFLAPYSGCAMGEHFRD-NGKHALIIFDDLS 273
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 66.5 bits (155), Expect = 4e-11
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 7/218 (3%)
Frame = +2
Query: 401 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 580
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149
Query: 581 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIME 760
+ + + +AP + +E +VTG+K VD L P T + ++
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAID 209
Query: 761 LINNVAKAHGG-------YSVFAGVGXRTREGNDLYHEMIESGVISLKDKTSKVALXYGQ 919
I N + + + ++ VG + + + ++G + S A
Sbjct: 210 TIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAP 269
Query: 920 MNXPPGARARVALTGLTVAEYFRDQKGKDVLLFXXNIS 1033
+ + +G + E+FRD GK L+ ++S
Sbjct: 270 L------QFLAPYSGCAMGEHFRD-NGKHALIIFDDLS 300
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 46.4 bits (105), Expect = 4e-05
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Frame = +2
Query: 545 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAXXXXXXXXX 724
V+G PID +GPI + + + +AP + +E +VTG+K VD L P
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIG 162
Query: 725 XXXXXXTVLIMELINNVAKAHGG-------YSVFAGVGXRTREGNDLYHEMIESGVISLK 883
T + ++ I N + + + ++ VG + + + ++G +
Sbjct: 163 DRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYT 222
Query: 884 DKTSKVALXYGQMNXPPGARARVALTGLTVAEYFRDQKGKDVLLFXXNIS 1033
S A + + +G + E+FRD GK L+ ++S
Sbjct: 223 IVVSATASDAAPL------QFLAPYSGCAMGEHFRD-NGKHALIIFDDLS 265
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 413 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 589
+ +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+ +
Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130
Query: 590 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 685
I+ + +E++ TGI +D++
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVM 162
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 41.9 bits (94), Expect = 9e-04
Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 9/191 (4%)
Frame = +2
Query: 488 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 667
+G R PV + LGRI N G+PID+ P+ + I+ + + +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 668 KVVDLLAPYAXXXXXXXXXXXXXXXTVLIMELI--NNVAKAHGGYS-------VFAGVGX 820
+D++ A + +++ + + G + VFA +G
Sbjct: 169 SAIDVMNSIARGQKIPIFSAAGLPHNEIAAQIVRQGGLVQLPGRNNETVNFAIVFAAMGV 228
Query: 821 RTREGNDLYHEMIESGVISLKDKTSKVALXYGQMNXPPGARARVALTGLTVAEYFRDQKG 1000
+ E G V L N P R LT AE+F G
Sbjct: 229 NMETARFFKQDFEECG------SMDNVCLFLNLANDPTIERIITPRIALTAAEFFAYHCG 282
Query: 1001 KDVLLFXXNIS 1033
K VL+ ++S
Sbjct: 283 KHVLVVLTDMS 293
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 35.5 bits (78), Expect = 0.078
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 3/130 (2%)
Frame = +2
Query: 653 LVTGIKVVDLLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGXRTRE 832
L+ G +V+D L P TV+ L ++ ++ G G R E
Sbjct: 216 LLCGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKY---SNSDAIIYVGCGERGNE 272
Query: 833 GNDLYHEMIESGVISLKDKTS---KVALXYGQMNXPPGARARVALTGLTVAEYFRDQKGK 1003
+++ + E + TS + AL N P AR TG+T+AEYFRD G
Sbjct: 273 MSEVLRDFPELTMEVEGVTTSIMKRTALVANTSNMPVAAREASIYTGITLAEYFRDM-GL 331
Query: 1004 DVLLFXXNIS 1033
+V + + S
Sbjct: 332 NVAMMADSTS 341
Score = 31.9 bits (69), Expect = 0.96
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 452 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 568
T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = -3
Query: 672 TFIPVTRISCCTDMSTNSGASAWIAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 508
TF PVT +S + +T + + + P + + +P T+ M P + P
Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527
Query: 507 IRMGEPESSTGCPRTKPSVPS 445
G P + T P TKP+VPS
Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 446 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 622
D +G + G+P+ +D G ++ P G E + ++ N GEP+DE A I + E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209
Query: 623 FVDMSV 640
+++V
Sbjct: 210 HAELTV 215
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -3
Query: 633 MSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 454
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 9 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68
Query: 453 VPSMAMVRTVFSP 415
P+ A +T P
Sbjct: 69 TPTAAPPKTCAPP 81
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -3
Query: 633 MSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 454
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197
Query: 453 VPSMAMVRTVFSP 415
P+ A +T P
Sbjct: 198 TPTAAPPKTCAPP 210
>Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.5 protein.
Length = 233
Score = 29.1 bits (62), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 733 CGQNCIDYGTDQQCCQSPW 789
C C+ Y TDQ+CC+ +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186
>Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.3 protein.
Length = 233
Score = 29.1 bits (62), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 733 CGQNCIDYGTDQQCCQSPW 789
C C+ Y TDQ+CC+ +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186
>AL110484-8|CAB54399.1| 274|Caenorhabditis elegans Hypothetical
protein Y38E10A.8 protein.
Length = 274
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 622 VCRHVCAAGDSRNWYKSRRSARSLCQRWKDWVVWRSWCGQ 741
+C +C ++W K R+ARS + W++ + W Q
Sbjct: 96 ICMELCEQNTLKDWIKGNRTARS-----RPWMLMKDWIKQ 130
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 8.9
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = +1
Query: 220 ITGDWSRCEQT*LCSQGFRQRAR*GSCRYWCRSGCSV*RQLAADPKCP*GAKSISPXXXX 399
I GDWS+C + C G+R+R+ SC S C R+ KC + P
Sbjct: 1494 IIGDWSKCSAS--CGGGWRRRS--VSC---TSSSCDETRKPKMFDKC--NEELCPPLTNN 1544
Query: 400 XXXXXXREHCTYHCHGRY*RLSPW 471
HC+ C G R W
Sbjct: 1545 SWQISPWTHCSVSCGGGVQRRKIW 1568
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 8.9
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = +1
Query: 220 ITGDWSRCEQT*LCSQGFRQRAR*GSCRYWCRSGCSV*RQLAADPKCP*GAKSISPXXXX 399
I GDWS+C + C G+R+R+ SC S C R+ KC + P
Sbjct: 1494 IIGDWSKCSAS--CGGGWRRRS--VSC---TSSSCDETRKPKMFDKC--NEELCPPLTNN 1544
Query: 400 XXXXXXREHCTYHCHGRY*RLSPW 471
HC+ C G R W
Sbjct: 1545 SWQISPWTHCSVSCGGGVQRRKIW 1568
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,933,095
Number of Sequences: 27780
Number of extensions: 536695
Number of successful extensions: 1396
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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