Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P18
(1248 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 473 e-134
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 460 e-130
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 405 e-114
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 383 e-107
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 298 1e-81
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 181 2e-46
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 149 6e-37
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 97 4e-21
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.58
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.58
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 1.8
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 2.4
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 473 bits (1166), Expect = e-134
Identities = 228/300 (76%), Positives = 252/300 (84%)
Frame = +3
Query: 144 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 323
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 324 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 503
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 504 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 683
KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 684 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQEF 863
D+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNH +QEF
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEF 243
Query: 864 KRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEXL 1043
KRK KKD+ N LSSS QASI I LFEG DF TSITRARFE L
Sbjct: 244 KRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEEL 303
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 460 bits (1133), Expect = e-130
Identities = 222/300 (74%), Positives = 248/300 (82%)
Frame = +3
Query: 144 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 323
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 324 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 503
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 504 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 683
KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 684 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQEF 863
D+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNH QEF
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEF 243
Query: 864 KRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEXL 1043
KRK KKD+ N LSSS QASI I L+EG DF TSITRARFE L
Sbjct: 244 KRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEEL 303
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 405 bits (997), Expect = e-114
Identities = 194/300 (64%), Positives = 230/300 (76%)
Frame = +3
Query: 144 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 323
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 324 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 503
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 504 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 683
KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 684 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQEF 863
D K +NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V H +QEF
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEF 247
Query: 864 KRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEXL 1043
KRK K D++ + LSS TQ ++ + L G DF +SITRARFE +
Sbjct: 248 KRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDI 307
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 383 bits (942), Expect = e-107
Identities = 177/299 (59%), Positives = 231/299 (77%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 326
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 327 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 506
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 507 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 686
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 687 KKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQEFK 866
K T E++++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+L + +
Sbjct: 218 KTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYN 276
Query: 867 RKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEXL 1043
RK D+ + LSS I I F G DF +++RA+FE +
Sbjct: 277 RKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEI 335
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 298 bits (731), Expect = 1e-81
Identities = 152/308 (49%), Positives = 201/308 (65%), Gaps = 5/308 (1%)
Frame = +3
Query: 135 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 311
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 312 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 491
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165
Query: 492 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 671
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAAL 225
Query: 672 AYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHL 851
AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H+
Sbjct: 226 AYGLDKK--NDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHI 283
Query: 852 VQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEG----XDFXTSI 1019
V+ FK+ DL+ + LSS ++ I + + I
Sbjct: 284 VETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEI 343
Query: 1020 TRARFEXL 1043
+RA+FE L
Sbjct: 344 SRAQFEKL 351
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 181 bits (440), Expect = 2e-46
Identities = 101/309 (32%), Positives = 163/309 (52%), Gaps = 5/309 (1%)
Frame = +3
Query: 132 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 311
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 312 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 488
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
+ TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAA 182
Query: 669 IAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 836
+ YG+ K E R V I D G + VSI+ G F +KST D +LG + D
Sbjct: 183 LTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKA 242
Query: 837 MVNHLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTS 1016
++++ EFK KYK D+ +N LS++ A + + + D +
Sbjct: 243 LIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSF 302
Query: 1017 ITRARFEXL 1043
I R+ FE L
Sbjct: 303 IKRSDFEEL 311
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 149 bits (362), Expect = 6e-37
Identities = 83/303 (27%), Positives = 158/303 (52%), Gaps = 6/303 (1%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 326
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 327 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFFPEEVS 488
+ + + L+G+ ++ T+ H+ V+ G+ K+ + ++ K E S
Sbjct: 87 VTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVI 204
Query: 669 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 848
+A ++ ++ V++ + G +VS+++++ G+ + ++ D +LGGE + +VN
Sbjct: 205 LALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNF 264
Query: 849 LVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRA 1028
+EF++K D N LS+ T AS + L +G DF +SI R
Sbjct: 265 FAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRL 324
Query: 1029 RFE 1037
R++
Sbjct: 325 RYD 327
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 848
Score = 97.1 bits (231), Expect = 4e-21
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 16/315 (5%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 323
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 324 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 497
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 498 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 677
+ AE + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEY 204
Query: 678 GLDKK-GTGERNVLIFDLGGGTFDVSIL---TIE-------DGIFEVKSTA-GDT-HLGG 818
L + T +I+D G G+ +++ T+E I +++ A G T L G
Sbjct: 205 SLSRSFSTDPTYNIIYDSGSGSTSATVISFDTVEGSSLGKKQNITRIRALASGFTLKLSG 264
Query: 819 EDFDNRMVNHLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEG 998
+ + +++ + F +K+ DL+ N LS++++A I L +G
Sbjct: 265 NEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADG 324
Query: 999 XDFXTSITRARFEXL 1043
DF ITR+ E L
Sbjct: 325 IDFRLKITRSVLESL 339
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 252 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 431
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 432 KIKVAYKGEDKTFFPE 479
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.58
Identities = 36/157 (22%), Positives = 65/157 (41%)
Frame = -3
Query: 829 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGS 650
S SS P S + DF+S I + + +S +P S +S+ S S P + + ++ S
Sbjct: 541 SSSSIP--TSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST--SSPSSTSLSISS 596
Query: 649 LMIRRTFKPEMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGK 470
TF S + I++ T+L + S + +S+ + S
Sbjct: 597 SSTSSTFSSAST---------SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSS 647
Query: 469 KVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN 359
+LSS + + + SL+T S+ T+ SS+
Sbjct: 648 SILSSSIST---IPISSSLSTYSSSVIPSSSTLVSSS 681
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 829 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 719
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 139 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 234
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 829 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 683
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 9.5
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = -2
Query: 857 LDQVVHHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKT 678
+DQ ++ L + +G AG G L D L G A +D + +
Sbjct: 260 VDQTAAANTIQNLLNNLGGAGFGAGLGDAGLGAGLGGAASPPAPAQDTRPP--EERYAEQ 317
Query: 677 VSNRSSSGFIDDSENVQA 624
+S + GF+D NVQA
Sbjct: 318 LSQLNEMGFVDFERNVQA 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,488,868
Number of Sequences: 5004
Number of extensions: 92817
Number of successful extensions: 309
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 679334062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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