Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P18
(1248 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 504 e-143
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 497 e-141
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 431 e-121
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 431 e-121
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 427 e-120
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 404 e-113
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 404 e-113
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 398 e-111
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 303 1e-82
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 300 1e-81
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 258 8e-69
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 258 8e-69
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 207 1e-53
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 173 2e-43
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 129 5e-30
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 129 5e-30
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 116 3e-26
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 5.2
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 29 9.1
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 29 9.1
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 29 9.1
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 29 9.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical protein
F26D10.3 protein.
Length = 640
Score = 504 bits (1243), Expect = e-143
Identities = 245/306 (80%), Positives = 266/306 (86%), Gaps = 1/306 (0%)
Frame = +3
Query: 129 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 485
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 486 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 665
SSMVL KMKETAEA+LG TV++AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAA
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
Query: 666 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 845
AIAYGLDKKG GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 240
Query: 846 HLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITR 1025
H EFKRK+KKDLA+N LSSS+QASI I LFEG DF T+ITR
Sbjct: 241 HFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITR 300
Query: 1026 ARFEXL 1043
ARFE L
Sbjct: 301 ARFEEL 306
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.elegans
heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 497 bits (1225), Expect = e-141
Identities = 242/306 (79%), Positives = 263/306 (85%), Gaps = 1/306 (0%)
Frame = +3
Query: 129 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 485
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 486 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 665
SSMVL KMK+TAEA+L TV++AV+TVP YFNDSQRQATKDAG I+GLNVLRIINEPTAA
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
Query: 666 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 845
AIAYGLDKKG GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 240
Query: 846 HLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITR 1025
H EFKRK+KKDLA+N LSSS QASI I LFEG DF T+ITR
Sbjct: 241 HFCAEFKRKHKKDLASNPRALRRLRTACERANETLSSSCQASIEIDSLFEGIDFYTNITR 300
Query: 1026 ARFEXL 1043
ARFE L
Sbjct: 301 ARFEEL 306
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical protein
F44E5.5 protein.
Length = 645
Score = 431 bits (1062), Expect = e-121
Identities = 207/306 (67%), Positives = 243/306 (79%), Gaps = 1/306 (0%)
Frame = +3
Query: 129 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 488
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAA 180
Query: 669 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVN 845
+AYGLDK E+NVLIFDLGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD RM+
Sbjct: 181 LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQ 240
Query: 846 HLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITR 1025
H + EFKRK KD++ N LSSS++A + + LFEG D T ITR
Sbjct: 241 HFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTKITR 300
Query: 1026 ARFEXL 1043
ARFE L
Sbjct: 301 ARFEEL 306
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical protein
F44E5.4 protein.
Length = 645
Score = 431 bits (1062), Expect = e-121
Identities = 207/306 (67%), Positives = 243/306 (79%), Gaps = 1/306 (0%)
Frame = +3
Query: 129 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 488
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAA 180
Query: 669 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVN 845
+AYGLDK E+NVLIFDLGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD RM+
Sbjct: 181 LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQ 240
Query: 846 HLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITR 1025
H + EFKRK KD++ N LSSS++A + + LFEG D T ITR
Sbjct: 241 HFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTKITR 300
Query: 1026 ARFEXL 1043
ARFE L
Sbjct: 301 ARFEEL 306
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical protein
C12C8.1 protein.
Length = 643
Score = 427 bits (1053), Expect = e-120
Identities = 203/306 (66%), Positives = 247/306 (80%), Gaps = 1/306 (0%)
Frame = +3
Query: 129 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 488
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
+MVL KMKETAEA LG +V++AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA
Sbjct: 121 AMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAA 180
Query: 669 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVN 845
+AYGLDK T E+N+LIFDLGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD+R++
Sbjct: 181 LAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDSRVLQ 240
Query: 846 HLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITR 1025
H + EFKRK KD+++N LSSST+A++ + LF+G DF + ITR
Sbjct: 241 HFMTEFKRKTGKDISSNPRAIRRLRTACERAKRTLSSSTEATVEVDSLFDGTDFYSKITR 300
Query: 1026 ARFEXL 1043
ARFE L
Sbjct: 301 ARFEEL 306
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 404 bits (994), Expect = e-113
Identities = 192/301 (63%), Positives = 237/301 (78%), Gaps = 2/301 (0%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 320
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 321 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 500
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 501 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 680
KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYG
Sbjct: 156 VKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYG 215
Query: 681 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQE 860
LDKK GERN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ + ++
Sbjct: 216 LDKK-DGERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKL 274
Query: 861 FKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEX 1040
+K+K KDL + LS+ Q + I LF+G DF ++TRA+FE
Sbjct: 275 YKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEE 334
Query: 1041 L 1043
L
Sbjct: 335 L 335
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. elegans
BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 404 bits (994), Expect = e-113
Identities = 192/301 (63%), Positives = 237/301 (78%), Gaps = 2/301 (0%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 320
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 321 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 500
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 501 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 680
KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYG
Sbjct: 156 VKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYG 215
Query: 681 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQE 860
LDKK GERN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ + ++
Sbjct: 216 LDKK-DGERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKL 274
Query: 861 FKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEX 1040
+K+K KDL + LS+ Q + I LF+G DF ++TRA+FE
Sbjct: 275 YKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEE 334
Query: 1041 L 1043
L
Sbjct: 335 L 335
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock protein
protein 4 protein.
Length = 657
Score = 398 bits (980), Expect = e-111
Identities = 191/301 (63%), Positives = 234/301 (77%), Gaps = 2/301 (0%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 320
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 321 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 500
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+MVL
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 501 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 680
TKMK+ AE+YLG V+NAV+TVPAYFND+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYG
Sbjct: 153 TKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYG 212
Query: 681 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQE 860
LDKK GERN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ + ++
Sbjct: 213 LDKK-DGERNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKL 271
Query: 861 FKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFEX 1040
+K+K KDL + LS+ Q I I LF+G DF ++TRA+FE
Sbjct: 272 YKKKSGKDLRKDNRAVQKLRREVEKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEE 331
Query: 1041 L 1043
L
Sbjct: 332 L 332
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 303 bits (745), Expect = 1e-82
Identities = 161/309 (52%), Positives = 205/309 (66%), Gaps = 6/309 (1%)
Frame = +3
Query: 135 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 311
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 312 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 488
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVG 145
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
+ VL KMKETAE+YLG TV NAV+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPTAAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAA 205
Query: 669 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 848
+AYGLD K G++ + ++DLGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+H
Sbjct: 206 LAYGLD-KDAGDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHH 264
Query: 849 LVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXD----FXTS 1016
LV EFK++ DL + LSS+TQ I + +
Sbjct: 265 LVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLK 324
Query: 1017 ITRARFEXL 1043
+TRA+FE +
Sbjct: 325 LTRAKFEQI 333
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 300 bits (737), Expect = 1e-81
Identities = 160/309 (51%), Positives = 204/309 (66%), Gaps = 6/309 (1%)
Frame = +3
Query: 135 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 311
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 312 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 488
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVG 145
Query: 489 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 668
+ VL KMKETAE+YLG TV N V+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPTAAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAA 205
Query: 669 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 848
+AYGLD K G++ + ++DLGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+H
Sbjct: 206 LAYGLD-KDAGDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHH 264
Query: 849 LVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXD----FXTS 1016
LV EFK++ DL + LSS+TQ I + +
Sbjct: 265 LVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLK 324
Query: 1017 ITRARFEXL 1043
+TRA+FE +
Sbjct: 325 LTRAKFEQI 333
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 258 bits (631), Expect = 8e-69
Identities = 135/300 (45%), Positives = 190/300 (63%), Gaps = 2/300 (0%)
Frame = +3
Query: 144 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 320
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 321 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMV 497
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 498 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 677
L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAY 180
Query: 678 GLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQ 857
L + RN+LI+DLGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++ +++
Sbjct: 181 SLKGQRLSRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLE 240
Query: 858 EFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFE 1037
EFK ++ DL N LS+S+ A I + L G DF I+R FE
Sbjct: 241 EFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGIDFIMRISRTDFE 300
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical protein
F11F1.1 protein.
Length = 607
Score = 258 bits (631), Expect = 8e-69
Identities = 135/300 (45%), Positives = 190/300 (63%), Gaps = 2/300 (0%)
Frame = +3
Query: 144 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 320
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 321 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMV 497
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 498 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 677
L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAY 180
Query: 678 GLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHLVQ 857
L + RN+LI+DLGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++ +++
Sbjct: 181 SLKGQRLSRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLE 240
Query: 858 EFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEGXDFXTSITRARFE 1037
EFK ++ DL N LS+S+ A I + L G DF I+R FE
Sbjct: 241 EFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGIDFIMRISRTDFE 300
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 207 bits (505), Expect = 1e-53
Identities = 110/264 (41%), Positives = 159/264 (60%), Gaps = 8/264 (3%)
Frame = +3
Query: 120 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIG 284
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 285 DAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKG 455
A Q NP TI+DAKR IGR FE + +D K +PF++ D GK ++
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144
Query: 456 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 635
K +PEE+ S+++ +K A +LG T+ VI+ PA FN+ QR T A I+ + V
Sbjct: 145 GTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEV 204
Query: 636 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 815
R+I+EPTAAA+AYGL KK G NV++ DLGGGT DVS+L ++ G+F ++ AG+ LG
Sbjct: 205 RRVISEPTAAALAYGLHKK-QGVENVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLG 263
Query: 816 GEDFDNRMVNHLVQEFKRKYKKDL 887
G+DF++R+ HL+ + K+ K +
Sbjct: 264 GQDFNDRVQKHLISKIAEKFGKTI 287
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical protein
C30C11.4 protein.
Length = 776
Score = 173 bits (421), Expect = 2e-43
Identities = 107/308 (34%), Positives = 157/308 (50%), Gaps = 9/308 (2%)
Frame = +3
Query: 147 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 326
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 327 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLT 503
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 504 KMKETAEAYLG--KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 677
K++ E+ L K V + V+ VP+YF D QR+A A +GLN LRI+NE TA A+AY
Sbjct: 124 KLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAY 183
Query: 678 GLDKKGTGE-----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 842
G+ K+ E RNV+ D+G + S++ G ++ +T+ D GG FD +
Sbjct: 184 GIYKQDLPEEDAKSRNVVFLDIGHSSTQASLVAFNRGKLQMVNTSYDLESGGIWFDALIR 243
Query: 843 NHLVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXLSSS-TQASIXIXXLFEGXDFXTSI 1019
H +EFK KY D AT+ +S++ T + I E D +
Sbjct: 244 EHFRKEFKTKYGIDAATSPRPWLRLLDECERVKKQMSANQTPIPLNIECFMEDKDVTGKM 303
Query: 1020 TRARFEXL 1043
R FE L
Sbjct: 304 QRQEFEDL 311
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical protein
T14G8.3b protein.
Length = 905
Score = 129 bits (311), Expect = 5e-30
Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 18/322 (5%)
Frame = +3
Query: 132 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 485
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 68 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 125
Query: 486 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 665
+M+L K+ EAY +TV++ VITVP + N ++R+A A I+GLN+L+++N+ +AA
Sbjct: 126 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAA 185
Query: 666 AIAYGL-DKKGTGER--NVLIFDLGGGTFDVSIL------TIEDGIFEVKS--TAG---D 803
A+ YG+ +K E+ ++LI+D+G +I+ T +DG + + T G D
Sbjct: 186 ALNYGVFRRKEITEKPTHMLIYDMGAVKTTATIVQYVLESTRKDGKDKQPTLRTVGVGFD 245
Query: 804 THLGGEDFDNRMVNHLVQEFKR--KYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIX 977
LGG + NR+ +HL + F+ K KD++TN LS++
Sbjct: 246 KTLGGLEITNRLRDHLEKVFRDTVKTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQ 305
Query: 978 IXXLFEGXDFXTSITRARFEXL 1043
+ LFE +F +TR E +
Sbjct: 306 VESLFEEQNFRAKVTREELEKM 327
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical protein
T14G8.3a protein.
Length = 921
Score = 129 bits (311), Expect = 5e-30
Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 18/322 (5%)
Frame = +3
Query: 132 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 308
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 309 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 485
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 141
Query: 486 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 665
+M+L K+ EAY +TV++ VITVP + N ++R+A A I+GLN+L+++N+ +AA
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAA 201
Query: 666 AIAYGL-DKKGTGER--NVLIFDLGGGTFDVSIL------TIEDGIFEVKS--TAG---D 803
A+ YG+ +K E+ ++LI+D+G +I+ T +DG + + T G D
Sbjct: 202 ALNYGVFRRKEITEKPTHMLIYDMGAVKTTATIVQYVLESTRKDGKDKQPTLRTVGVGFD 261
Query: 804 THLGGEDFDNRMVNHLVQEFKR--KYKKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIX 977
LGG + NR+ +HL + F+ K KD++TN LS++
Sbjct: 262 KTLGGLEITNRLRDHLEKVFRDTVKTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQ 321
Query: 978 IXXLFEGXDFXTSITRARFEXL 1043
+ LFE +F +TR E +
Sbjct: 322 VESLFEEQNFRAKVTREELEKM 343
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 116 bits (279), Expect = 3e-26
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 15/315 (4%)
Frame = +3
Query: 144 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 320
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 321 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 500
L+G+ + + + + F V D K + +K +++ E +++M+L
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMIL 145
Query: 501 TKMKETAEAYL-GKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 677
K+ E Y +++ VITVP YF ++R A + A ++GL VL++IN+ TAAA+++
Sbjct: 146 ANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTVLQLINDGTAAALSH 205
Query: 678 GL-DKKGTGER--NVLIFDLGGGTFDVSILTI--------EDGIFEVKSTAGDTHLGGED 824
G+ +K GE+ ++++D+G +I+ + V D LGG +
Sbjct: 206 GIFRRKEIGEKPQRLMVYDMGAAKTTATIVEFKLVKEKYEKQPKMTVLGVGFDRTLGGIE 265
Query: 825 FDNRMVNHLVQEFKRKY--KKDLATNXXXXXXXXXXXXXXXXXLSSSTQASIXIXXLFEG 998
NR+ +HL++ F++ Y K + TN LS++ + I E
Sbjct: 266 MTNRLRDHLIEMFEKNYKPKTKVNTNRRAMTKFSKEAERLKQVLSANAEHFAQIESAHED 325
Query: 999 XDFXTSITRARFEXL 1043
D +TR F L
Sbjct: 326 IDAKLKVTREDFNHL 340
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.5 bits (63), Expect = 5.2
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 733 AVPST---CPSLPSRMVSSR*NPPPATPTWEVRTLTIAW*TTWSRSSRGNTKRTSLPTRE 903
AVP+T PS P+ VS++ P P TP R A TT +R+SR T R + T E
Sbjct: 631 AVPTTTPLAPSAPTVRVSTQRAPVPTTP----RPTAPAVQTTTTRASRLETTRVPVKTVE 686
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 141 VLLPFCIFNQSCYLFLKQLSKRARLT-ASLQVKINGI 34
++LP + + F K LS+R R+T ASL+ ++ GI
Sbjct: 743 IILPALTYGSEAWTFTKALSERVRITHASLERRLVGI 779
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 236 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 331
D V+CCVH R S+ + Q+ D+ Q N+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 141 VLLPFCIFNQSCYLFLKQLSKRARLT-ASLQVKINGI 34
++LP + + F K LS+R R+T ASL+ ++ GI
Sbjct: 918 IVLPALTYGSEAWTFTKALSERVRITHASLERRLVGI 954
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 141 VLLPFCIFNQSCYLFLKQLSKRARLT-ASLQVKINGI 34
++LP + + F K LS+R R+T ASL+ ++ GI
Sbjct: 657 IVLPALTYGSEAWTFTKALSERVRITHASLERRLVGI 693
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 141 VLLPFCIFNQSCYLFLKQLSKRARLT-ASLQVKINGI 34
++LP + + F K LS+R R+T ASL+ ++ GI
Sbjct: 269 IVLPALTYGSEAWTFTKALSERVRITHASLERRLVGI 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,457,178
Number of Sequences: 27780
Number of extensions: 557572
Number of successful extensions: 1634
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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