Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P17
(1217 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein pr... 32 4.8
BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein pr... 32 4.8
BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein pr... 32 4.8
BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL391870-3|CAI40927.1| 1287|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL353736-3|CAI40655.1| 1287|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit... 32 4.8
AL133161-1|CAB61487.1| 1287|Homo sapiens hypothetical protein pr... 32 4.8
AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein pr... 32 4.8
AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein. 32 4.8
BC046124-1|AAH46124.2| 805|Homo sapiens RSF1 protein protein. 31 8.5
AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote... 31 8.5
>BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein
protein.
Length = 1359
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 593 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 651
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 652 LRFKHEATREAWEEKPINTALS 673
>BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein
protein.
Length = 1763
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein
protein.
Length = 1204
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1814
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>AL391870-3|CAI40927.1| 1287|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1287
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 218 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 276
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 277 LRFKHEATREAWEEKPINTALS 298
>AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>AL353736-3|CAI40655.1| 1287|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1287
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 218 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 276
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 277 LRFKHEATREAWEEKPINTALS 298
>AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>AL133161-1|CAB61487.1| 1287|Homo sapiens hypothetical protein
protein.
Length = 1287
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 218 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 276
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 277 LRFKHEATREAWEEKPINTALS 298
>AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein
protein.
Length = 1893
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 824 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 883 LRFKHEATREAWEEKPINTALS 904
>AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein.
Length = 1852
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 393 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 569
+ T K+ EL+ F + + PH ++ C A++ + E + +K AT + DL
Sbjct: 862 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 920
Query: 570 LNTKTK-TREQWEEKLNKTNLS 632
L K + TRE WEEK T LS
Sbjct: 921 LRFKHEATREAWEEKPINTALS 942
>BC046124-1|AAH46124.2| 805|Homo sapiens RSF1 protein protein.
Length = 805
Score = 31.1 bits (67), Expect = 8.5
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +3
Query: 585 KTREQWEEKLNKTNLSNDDICDALIRKAMEAIKDMPLNQSVVAEDKNSLLGRKVRAE-PQ 761
+T +Q E+K ++ S + D R +++ + + E + L V+ E P
Sbjct: 41 ETPKQEEQKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVKLEKPL 100
Query: 762 TNNILKLQAKTEDSNAAVNLKPVKLTIEKC--DQRVTRSGSDK 884
N K K E + N+KP+K+ +++C D + T+S +K
Sbjct: 101 PENEEKKIIKEESDSFKENVKPIKVEVKECRADPKDTKSSMEK 143
>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein
8 large isoform protein.
Length = 1431
Score = 31.1 bits (67), Expect = 8.5
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +3
Query: 585 KTREQWEEKLNKTNLSNDDICDALIRKAMEAIKDMPLNQSVVAEDKNSLLGRKVRAE-PQ 761
+T +Q E+K ++ S + D R +++ + + E + L V+ E P
Sbjct: 230 ETPKQEEQKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVKLEKPL 289
Query: 762 TNNILKLQAKTEDSNAAVNLKPVKLTIEKC--DQRVTRSGSDK 884
N K K E + N+KP+K+ +++C D + T+S +K
Sbjct: 290 PENEEKKIIKEESDSFKENVKPIKVEVKECRADPKDTKSSMEK 332
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,481,822
Number of Sequences: 237096
Number of extensions: 2626302
Number of successful extensions: 4887
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4881
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17229469990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -