Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P15
         (1248 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   4.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   4.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   8.3  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
 Frame = +2

Query: 656 DVF--CWRGEIDRSIRDNDLQYDNRGHV 733
           DVF  CW GE  R      L YD    V
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARV 136


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
 Frame = +2

Query: 656 DVF--CWRGEIDRSIRDNDLQYDNRGHV 733
           DVF  CW GE  R      L YD    V
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARV 136


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +1

Query: 310 FSCSPFLCTYVTAAQKLMPTPTGAWXSTTLEAD*ALPVNLGLY 438
           F  S  L  Y    Q L  +    W    LEAD  LP+    Y
Sbjct: 36  FRSSKLLILYNIILQVLFVSFVSYWLYLVLEADDMLPIYKNTY 78


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +1

Query: 310 FSCSPFLCTYVTAAQKLMPTPTGAWXSTTLEAD*ALPVNLGLY 438
           F  S  L  Y    Q L  +    W    LEAD  LP+    Y
Sbjct: 54  FRSSKLLILYNIILQVLFVSFVSYWLYLVLEADDMLPIYKNTY 96


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +3

Query: 483 KNQGLVAYFKQLIHEPAKFIFLASNILVLACIPARLLKETNVEEAI 620
           K+  L  YF+ L+    +F      +L L C   RL     + EA+
Sbjct: 378 KHVELAHYFESLVRGDERFEITEEVVLGLVCF--RLKASNEINEAL 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,384
Number of Sequences: 336
Number of extensions: 3942
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36582916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)