Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P15
         (1248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   5.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   7.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   7.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   7.3  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   9.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   9.7  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   9.7  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    22   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 677  HRASKKHQQKPRSRQQEKQ 621
            H + K  QQ+P+ +QQ++Q
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQ 1513



 Score = 22.2 bits (45), Expect = 9.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 710  VDHCHEWTGQFHRASKKHQQKPRSRQQEKQ 621
            VDH  + T Q     ++ QQ+ +  QQ+ Q
Sbjct: 1493 VDHSSQKTQQQQPQQQQQQQQQQQPQQQSQ 1522



 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 665  KKHQQKPRSRQQEKQYG 615
            ++ QQ+ + +QQ+K+YG
Sbjct: 1535 QQQQQQQQPQQQQKEYG 1551


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 660 TSTKTTIPAAGKAVWLPP 607
           T TK  +   GK +W PP
Sbjct: 121 TMTKAILHYTGKVLWTPP 138


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 531 AKFIFLASNILVLACIPARLLKETNV 608
           A F+FLAS  L++  +P ++  +T V
Sbjct: 7   AGFLFLASLCLLVQAVPNKVADKTYV 32


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +3

Query: 789 FLYRGFPNVQSTLYSSYPSTWMALFQITLGDYSYSDLSQTTY 914
           FLY G  +++         +W AL ++  GD    D +   Y
Sbjct: 17  FLYFGEADIKKDCRKESKVSWAALKKMKAGDMEQDDQNLKCY 58


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 531 AKFIFLASNILVLACIPARLLKETNV 608
           A F+FLAS  L++  +P ++  +T V
Sbjct: 7   AGFLFLASLCLLVQAVPNKVADKTYV 32


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 881 LQLLGSQSDNIP*SLEDCV 937
           L+L+G+Q++ I  S E+CV
Sbjct: 97  LELIGTQAEGIFGSSEECV 115


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 654 TKTTIPAAGKAVWLPP 607
           TK T+  +G  VW PP
Sbjct: 131 TKATVYYSGLVVWQPP 146


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 654 TKTTIPAAGKAVWLPP 607
           TK  +   GK VW PP
Sbjct: 123 TKAILHHTGKVVWKPP 138


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 881 LQLLGSQSDNIP*SLEDCV 937
           L+L+G+Q++ I  S E+CV
Sbjct: 65  LELIGTQAEGIFGSSEECV 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,756
Number of Sequences: 438
Number of extensions: 4691
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42622365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)