Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P12
         (1236 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126...    33   0.35 
05_05_0044 - 21819193-21819418,21819531-21820759                       31   1.9  
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164...    29   5.7  
09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219     29   7.5  
06_03_0068 - 16177937-16178746                                         29   7.5  

>04_01_0122 +
           1267048-1267149,1267764-1267855,1268137-1268234,
           1268333-1268488,1268736-1269355,1269480-1269547,
           1269848-1270099,1270390-1270525,1271054-1271246,
           1271386-1271939
          Length = 756

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = +1

Query: 652 DSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEIKFNLPDAAIPQAADGDIPAGTFG 831
           D     D+ P D     N    + S  N TT  G  I  NLP  AIP     +    T  
Sbjct: 610 DPGLIYDINPLDYLKFFNCMGGLGSQDNCTTTKGSVIDLNLPSIAIPNLRTSETAVRTVT 669

Query: 832 AIDALNHNVYECYISP 879
            +      VY+ ++ P
Sbjct: 670 NVGVQQEVVYKAFLDP 685


>05_05_0044 - 21819193-21819418,21819531-21820759
          Length = 484

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 362 MPLLLTILERRRKRPQLMNRSTTWD 436
           MPL L +L+R++++ QL+ R T WD
Sbjct: 112 MPLSLRMLKRKKQQQQLVARQTRWD 136


>04_01_0142 +
           1640472-1640611,1641618-1641744,1642233-1642425,
           1642793-1643349
          Length = 338

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 23/82 (28%), Positives = 29/82 (35%)
 Frame = +1

Query: 634 NGERKMDSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEIKFNLPDAAIPQAADGDI 813
           N     D     D+ P D     N    + S  N TTV G     NLP  AIP       
Sbjct: 186 NPNMAADPGLIYDIEPSDYFKFFNCMGGLGSGDNCTTVKGSLADLNLPSIAIPNPRTFQA 245

Query: 814 PAGTFGAIDALNHNVYECYISP 879
              T   +   N  VY+ ++ P
Sbjct: 246 TMRTVTNVGQAN-AVYKAFLQP 266


>09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219
          Length = 215

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 610 YIIDLTLDNGERKMDSARCQDLLPEDLCLPENLYHYITSIGN 735
           ++IDL ++  +    SAR ++LL ++ C  E  +H    IGN
Sbjct: 80  HLIDL-VETKDNSPSSARLEELLRKENCRKETAFHDAVCIGN 120


>06_03_0068 - 16177937-16178746
          Length = 269

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 388 AKEETAPIDEPLYDLGPHTSSIPVQETYSQNFEFGGYIDQVE 513
           A EE  PID PL DL PH +  P +      +    +ID +E
Sbjct: 188 ADEEGLPIDIPLPDLEPHHNPPPEEPKEGWTYNVLIHIDTLE 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,698,135
Number of Sequences: 37544
Number of extensions: 472891
Number of successful extensions: 1139
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)