Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P11
(1291 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 108 4e-22
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 91 8e-17
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 72 4e-11
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 71 5e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 2e-09
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 65 3e-09
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 43 0.020
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 42 0.035
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.035
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 41 0.080
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 38 0.56
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 37 0.99
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 37 1.3
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 34 7.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 108 bits (259), Expect = 4e-22
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +2
Query: 734 PWKAPSCALLFRPCRLPDTCPPFSLREAWXFLIAHAVGISXRCRSFAPSW 883
P +APSCALLFRPCRLPDTCPPFSLREAW FLIAHAVGIS RCRSFAPSW
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSW 98
Score = 76.2 bits (179), Expect = 2e-12
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = +1
Query: 592 SKRPGTVKRPGCWXFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFPLES 744
SK+ T FSIGSAPLTSITKIDAQV GGETRQDYKDTRRFPLE+
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA 52
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 90.6 bits (215), Expect = 8e-17
Identities = 56/97 (57%), Positives = 60/97 (61%)
Frame = +1
Query: 448 GALPXPRSLTRCARSFGXGERYQLTQRX*YGYPQNQGITQEXTCEQKASKRPGTVKRPGC 627
G +P PRSLTR ARSFG GERY+LT G E T + SK RP
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE---IRPRR 81
Query: 628 WXFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFPL 738
FSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 82 SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 71.7 bits (168), Expect = 4e-11
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +1
Query: 751 VRSPVPTLPXTGYLSAFLPSGSVXLSHSSRCRYLXSV 861
+RSPVPTLP TGYLSAFLPSGSV LSHSSRCRYL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 71.3 bits (167), Expect = 5e-11
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 610 VKRPGCWXFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFPL 738
V+ P FSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 65.7 bits (153), Expect = 2e-09
Identities = 35/71 (49%), Positives = 39/71 (54%)
Frame = -1
Query: 913 RXERGVXAPXPAWSERPTPX*DTYSVSYEKAPRFPKGERRTGIR*XAGSEQESARGSFPG 734
R ERGV A PAWSERP P DT SVSYEKAPRFPKG++ + A G
Sbjct: 23 RAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAG 82
Query: 733 GNAWYLYSPVG 701
+ SPVG
Sbjct: 83 EKSPASLSPVG 93
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 65.3 bits (152), Expect = 3e-09
Identities = 33/37 (89%), Positives = 33/37 (89%)
Frame = +3
Query: 468 LTDSLRSVVRLXXAVSAHSKXVIRLSTESGDNAGXNM 578
LTDSLRSVVRL AVSAHSK VIRLSTESGDNAG NM
Sbjct: 23 LTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 42.7 bits (96), Expect = 0.020
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -1
Query: 931 RIRPTXRXERGVXAPXPAWSERPTPX*DT 845
RIR + R ERGV A PAWSERPTP DT
Sbjct: 17 RIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 41.9 bits (94), Expect = 0.035
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 403 INESANARGXXVXVLGALPXPRSLTRCARSFGXGERYQL-TQRX*YGYPQNQGITQ 567
I + A AR V VL ALP RS TRC RS G G + YG PQ QG+ Q
Sbjct: 267 IRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 41.9 bits (94), Expect = 0.035
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 541 YPQNQGITQEXTCEQKASKRPGTVKRPGCWXFSIGSAPLTSITKIDAQVXGGETRQDYKD 720
+P+N I + + + + P T F S PLT+ITKI Q +T+ +YK
Sbjct: 38 HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97
Query: 721 TRRFPLES 744
T FPL+S
Sbjct: 98 TTPFPLQS 105
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 40.7 bits (91), Expect = 0.080
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -1
Query: 931 RIRPTXRXERGVXAPXPAWSERPTP 857
RIR + R ERGV A PAWSERPTP
Sbjct: 17 RIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 37.9 bits (84), Expect = 0.56
Identities = 23/57 (40%), Positives = 26/57 (45%)
Frame = +2
Query: 713 IKIPGVSPWKAPSCALLFRPCRLPDTCPPFSLREAWXFLIAHAVGISXRCRSFAPSW 883
+KI VS P P PPFSL + + GIS RCRSFAPSW
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSW 88
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.1 bits (82), Expect = 0.99
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 203 DPXMIRYIDEXGQTTTXMQ 259
DP MIRYIDE GQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 36.7 bits (81), Expect = 1.3
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2
Query: 404 LMNRPTRGXRXFXXWXLFRF 463
LMNRPTRG R F W LFRF
Sbjct: 27 LMNRPTRGERRFAYWALFRF 46
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 34.3 bits (75), Expect = 7.0
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -2
Query: 600 PFAGLLLTCXFLRYPLILWITV 535
P LLTC F YPLILWITV
Sbjct: 19 PVLCFLLTCSFRLYPLILWITV 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,868,967
Number of Sequences: 1657284
Number of extensions: 12120178
Number of successful extensions: 22448
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22430
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 132009383434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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