Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P10
         (1232 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   6.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   6.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   6.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   8.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   8.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 165 TPRHS*RPQWLGXSNCNSSEIPGHXLIFLSS 257
           T R++ + QWL  S+   SEIP     FL +
Sbjct: 291 TFRNTKKLQWLDTSHNRISEIPNDLFRFLGN 321


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 355 VLSSDGNYALSGSWDKTLRLWDL 423
           VLS  G   +S +W  +LR  D+
Sbjct: 260 VLSDHGTQFISNTWQNSLRAADI 282


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 409 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 534
           RLW  AA    R + D   DV S     D    ++  RD+ +
Sbjct: 567 RLWPRAAAFAERVWSDPQLDVTSFTIQEDVYTRLNTHRDRLV 608


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 597 GVMCQILTQSCQPHYC 644
           G +C I T  C P+ C
Sbjct: 100 GALCNINTDDCSPNPC 115


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 641 IMGLA*LGENLTHDTQSLCPSSWMV 567
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 641 IMGLA*LGENLTHDTQSLCPSSWMV 567
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,630
Number of Sequences: 336
Number of extensions: 5973
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)