Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P08
(1262 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 489 e-138
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 489 e-138
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 489 e-138
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 487 e-138
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 459 e-129
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 459 e-129
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 454 e-128
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 453 e-127
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 452 e-127
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 450 e-126
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 450 e-126
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 431 e-121
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 427 e-119
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 426 e-119
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 400 e-111
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 382 e-106
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 238 7e-63
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 235 4e-62
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 235 6e-62
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 235 6e-62
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 234 8e-62
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 233 2e-61
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 195 5e-50
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 195 5e-50
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 128 1e-29
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 128 1e-29
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.99
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 7.0
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 7.0
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 7.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 489 bits (1207), Expect = e-138
Identities = 227/271 (83%), Positives = 245/271 (90%), Gaps = 2/271 (0%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 857 SLRFDGALNVDLTEFXTNLGALP--PYPLPT 943
SLRFDGALNVDLTEF TNL P +PL T
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLAT 271
Score = 59.7 bits (138), Expect = 4e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL T++P ISA KAYHEQLSVA I
Sbjct: 260 VPYPRIHFPLATFSPVISAEKAYHEQLSVAEI 291
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN EP NQMVKCDPR A C+L+RGD P+
Sbjct: 292 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPK 326
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 489 bits (1207), Expect = e-138
Identities = 227/271 (83%), Positives = 245/271 (90%), Gaps = 2/271 (0%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 857 SLRFDGALNVDLTEFXTNLGALP--PYPLPT 943
SLRFDGALNVDLTEF TNL P +PL T
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLAT 271
Score = 59.7 bits (138), Expect = 4e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL T++P ISA KAYHEQLSVA I
Sbjct: 260 VPYPRIHFPLATFSPVISAEKAYHEQLSVAEI 291
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN EP NQMVKCDPR A C+L+RGD P+
Sbjct: 292 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPK 326
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 489 bits (1207), Expect = e-138
Identities = 227/271 (83%), Positives = 245/271 (90%), Gaps = 2/271 (0%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 857 SLRFDGALNVDLTEFXTNLGALP--PYPLPT 943
SLRFDGALNVDLTEF TNL P +PL T
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLAT 271
Score = 59.7 bits (138), Expect = 4e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL T++P ISA KAYHEQLSVA I
Sbjct: 260 VPYPRIHFPLATFSPVISAEKAYHEQLSVAEI 291
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN EP NQMVKCDPR A C+L+RGD P+
Sbjct: 292 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPK 326
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 487 bits (1202), Expect = e-138
Identities = 226/270 (83%), Positives = 244/270 (90%), Gaps = 2/270 (0%)
Frame = +2
Query: 140 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 319
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 320 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 499
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 500 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 679
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 680 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 859
VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITAS
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITAS 240
Query: 860 LRFDGALNVDLTEFXTNLGALP--PYPLPT 943
LRFDGALNVDLTEF TNL P +PL T
Sbjct: 241 LRFDGALNVDLTEFQTNLVPYPRIHFPLAT 270
Score = 59.7 bits (138), Expect = 4e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL T++P ISA KAYHEQLSVA I
Sbjct: 259 VPYPRIHFPLATFSPVISAEKAYHEQLSVAEI 290
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN EP NQMVKCDPR A C+L+RGD P+
Sbjct: 291 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPK 325
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 459 bits (1131), Expect = e-129
Identities = 220/318 (69%), Positives = 246/318 (77%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYPLPTGHVRXXHLCRXGLP*TAFRRRXXQTHXXSPP 1036
SLRFDGALNVDL EF TNL P P A P
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYH-EALSVSDITNSCFEPA 297
Query: 1037 TKW*NATPXHGKXWLAVC 1090
+ P HGK ++AVC
Sbjct: 298 NQMVKCDPRHGK-YMAVC 314
Score = 52.8 bits (121), Expect = 5e-07
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN+ EPANQMVKCDPR A C+LYRGD P+
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPK 324
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 459 bits (1131), Expect = e-129
Identities = 220/318 (69%), Positives = 246/318 (77%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYPLPTGHVRXXHLCRXGLP*TAFRRRXXQTHXXSPP 1036
SLRFDGALNVDL EF TNL P P A P
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYH-EALSVSDITNSCFEPA 297
Query: 1037 TKW*NATPXHGKXWLAVC 1090
+ P HGK ++AVC
Sbjct: 298 NQMVKCDPRHGK-YMAVC 314
Score = 52.8 bits (121), Expect = 5e-07
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN+ EPANQMVKCDPR A C+LYRGD P+
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPK 324
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 454 bits (1118), Expect = e-128
Identities = 209/266 (78%), Positives = 234/266 (87%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYP 934
SLRFDGALNVDL EF TN L PYP
Sbjct: 239 SLRFDGALNVDLNEFQTN---LVPYP 261
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL Y P ISA KAYHE LSV I
Sbjct: 258 VPYPRIHFPLAAYTPLISADKAYHEALSVNDI 289
Score = 52.8 bits (121), Expect = 5e-07
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN+ EPANQMVKCDPR A C+LYRGD P+
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPK 324
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 453 bits (1117), Expect = e-127
Identities = 207/272 (76%), Positives = 234/272 (86%), Gaps = 2/272 (0%)
Frame = +2
Query: 134 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 313
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 314 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 493
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 494 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 673
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 674 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 853
++VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLD+ RPTYTNLNRLI Q++SS+T
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVT 244
Query: 854 ASLRFDGALNVDLTEFXTNLGALP--PYPLPT 943
ASLRFDGALNVDLTEF TNL P +PL T
Sbjct: 245 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLTT 276
Score = 60.9 bits (141), Expect = 2e-09
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXIXKR 1019
VPYPRIHFPL TYAP ISA KAYHEQ++VA I ++
Sbjct: 265 VPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQ 299
Score = 48.8 bits (111), Expect = 8e-06
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
T EP QMVKCDPR ACC+LYRGD P+
Sbjct: 297 TQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPK 331
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 452 bits (1113), Expect = e-127
Identities = 208/266 (78%), Positives = 233/266 (87%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYP 934
SLRFDGALNVDL EF TN L PYP
Sbjct: 239 SLRFDGALNVDLNEFQTN---LVPYP 261
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL Y P ISA KAYHE LSV I
Sbjct: 258 VPYPRIHFPLAAYTPLISADKAYHEALSVNDI 289
Score = 52.8 bits (121), Expect = 5e-07
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN+ EPANQMVKCDPR A C+LYRGD P+
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPK 324
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 450 bits (1109), Expect = e-126
Identities = 207/266 (77%), Positives = 233/266 (87%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYP 934
SLRFDGALNVDL EF TN L PYP
Sbjct: 239 SLRFDGALNVDLNEFQTN---LVPYP 261
Score = 54.4 bits (125), Expect = 2e-07
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL +Y P ISA KAYHE LSV I
Sbjct: 258 VPYPRIHFPLASYTPLISAEKAYHEALSVNDI 289
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN+ EPANQMVKCDPR+ A C+LYRGD P+
Sbjct: 290 TNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPK 324
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 450 bits (1109), Expect = e-126
Identities = 207/266 (77%), Positives = 233/266 (87%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYP 934
SLRFDGALNVDL EF TN L PYP
Sbjct: 239 SLRFDGALNVDLNEFQTN---LVPYP 261
Score = 54.4 bits (125), Expect = 2e-07
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL +Y P ISA KAYHE LSV I
Sbjct: 258 VPYPRIHFPLASYTPLISAEKAYHEALSVNDI 289
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN+ EPANQMVKCDPR+ A C+LYRGD P+
Sbjct: 290 TNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPK 324
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 431 bits (1062), Expect = e-121
Identities = 194/266 (72%), Positives = 229/266 (86%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
+VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL + PTYT+LNRL+ Q+VSSITA
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITA 240
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYP 934
SLRFDGALNVDLTEF TN L PYP
Sbjct: 241 SLRFDGALNVDLTEFQTN---LVPYP 263
Score = 62.9 bits (146), Expect = 5e-10
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPLVTYAP ISA KAYHEQLSV+ I
Sbjct: 260 VPYPRIHFPLVTYAPIISAEKAYHEQLSVSEI 291
Score = 53.6 bits (123), Expect = 3e-07
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
TN EP +QMVKCDPR+ ACC+LYRGD P+
Sbjct: 292 TNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPK 326
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 427 bits (1051), Expect = e-119
Identities = 197/266 (74%), Positives = 221/266 (83%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL + RPTY NLNR+I Q+VSSITA
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITA 237
Query: 857 SLRFDGALNVDLTEFXTNLGALPPYP 934
SLRFDGALNVDL EF TN L PYP
Sbjct: 238 SLRFDGALNVDLNEFQTN---LVPYP 260
Score = 46.0 bits (104), Expect = 6e-05
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXIXKRXXRA 1031
VPYPRIHFPLV Y P IS+ A+HE LSV I K A
Sbjct: 257 VPYPRIHFPLVAYNPLISS--AHHEFLSVDEITKSCFEA 293
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
T + E +NQMVKCDP+ A C+LYRGD P+
Sbjct: 287 TKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPK 321
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 426 bits (1050), Expect = e-119
Identities = 197/265 (74%), Positives = 222/265 (83%)
Frame = +2
Query: 140 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 319
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 320 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 499
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 500 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 679
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 680 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 859
VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITAS
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITAS 247
Query: 860 LRFDGALNVDLTEFXTNLGALPPYP 934
LRF+GALNVDLTEF TN L PYP
Sbjct: 248 LRFEGALNVDLTEFQTN---LVPYP 269
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVA 1004
VPYPRIHFPLVTYAP +SA +A HEQ +V+
Sbjct: 266 VPYPRIHFPLVTYAPLVSAERASHEQNTVS 295
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
T+A EP QMVKCDPR A C+LYRGD P+
Sbjct: 298 THACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPK 332
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 400 bits (984), Expect = e-111
Identities = 184/270 (68%), Positives = 217/270 (80%), Gaps = 2/270 (0%)
Frame = +2
Query: 140 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 319
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 320 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 499
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 500 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 679
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 680 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 859
VEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L +ERP+Y+NLNRLI Q+VSSITAS
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITAS 244
Query: 860 LRFDGALNVDLTEFXTNLGALP--PYPLPT 943
LRFDGALNVDL EF TNL P +PL T
Sbjct: 245 LRFDGALNVDLNEFQTNLVPYPRIHFPLAT 274
Score = 54.8 bits (126), Expect = 1e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXI 1010
VPYPRIHFPL TYAP ISA +A+HE LSV I
Sbjct: 263 VPYPRIHFPLATYAPVISADRAHHEPLSVQDI 294
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
T+ E ANQMVKCDP + A C+LYRGD P+
Sbjct: 295 THMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPK 329
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 382 bits (941), Expect = e-106
Identities = 177/244 (72%), Positives = 202/244 (82%)
Frame = +2
Query: 203 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 382
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 383 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 562
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 563 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 742
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 743 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFXTNLGAL 922
MVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITASLRF+GALNVDLTEF TN L
Sbjct: 181 MVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTN---L 237
Query: 923 PPYP 934
PYP
Sbjct: 238 VPYP 241
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVA 1004
VPYPRIHFPLVTYAP +SA +A HEQ +V+
Sbjct: 238 VPYPRIHFPLVTYAPLVSAERASHEQNTVS 267
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 1012 TNAXXEPANQMVKCDPRSWXVXACCMLYRGDXXPR 1116
T+A EP QMVKCDPR A C+LYRGD P+
Sbjct: 270 THACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPK 304
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 238 bits (582), Expect = 7e-63
Identities = 114/263 (43%), Positives = 158/263 (60%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTT 238
Query: 857 SLRFDGALNVDLTEFXTNLGALP 925
LRF G LN DL + N+ P
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFP 261
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 235 bits (576), Expect = 4e-62
Identities = 113/263 (42%), Positives = 159/263 (60%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 857 SLRFDGALNVDLTEFXTNLGALP 925
LRF G LN DL + N+ P
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFP 261
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 235 bits (574), Expect = 6e-62
Identities = 112/263 (42%), Positives = 158/263 (60%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 857 SLRFDGALNVDLTEFXTNLGALP 925
LRF G LN DL + N+ P
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFP 261
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 235 bits (574), Expect = 6e-62
Identities = 112/263 (42%), Positives = 158/263 (60%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 857 SLRFDGALNVDLTEFXTNLGALP 925
LRF G LN DL + N+ P
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFP 261
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 234 bits (573), Expect = 8e-62
Identities = 112/263 (42%), Positives = 159/263 (60%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 857 SLRFDGALNVDLTEFXTNLGALP 925
LRF G LN DL + N+ P
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFP 261
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 233 bits (570), Expect = 2e-61
Identities = 111/263 (42%), Positives = 155/263 (58%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTT 238
Query: 857 SLRFDGALNVDLTEFXTNLGALP 925
LRF G LN DL + N+ P
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFP 261
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 915 VPYPRIHFPLVTYAPXISAXKAYHEQLSVAXIXKRXXRAR 1034
VP+PR+HF + +AP S + L+V + ++ A+
Sbjct: 258 VPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAK 297
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 195 bits (476), Expect = 5e-50
Identities = 104/258 (40%), Positives = 148/258 (57%), Gaps = 1/258 (0%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 853
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 854 ASLRFDGALNVDLTEFXT 907
RF G L D+ + T
Sbjct: 239 TFQRFKGNLKTDIRKLNT 256
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 195 bits (476), Expect = 5e-50
Identities = 104/258 (40%), Positives = 148/258 (57%), Gaps = 1/258 (0%)
Frame = +2
Query: 137 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 316
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 317 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 496
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 497 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 676
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 853
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 854 ASLRFDGALNVDLTEFXT 907
RF G L D+ + T
Sbjct: 239 TFQRFKGNLKTDIRKLNT 256
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 128 bits (308), Expect = 1e-29
Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 4/248 (1%)
Frame = +2
Query: 149 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 328
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 329 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 499
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 500 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 676
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 857 SLRFDGAL 880
RF+ A+
Sbjct: 244 PYRFNSAM 251
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 128 bits (308), Expect = 1e-29
Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 4/248 (1%)
Frame = +2
Query: 149 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 328
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 329 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 499
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 500 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 676
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 677 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 856
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 857 SLRFDGAL 880
RF+ A+
Sbjct: 244 PYRFNSAM 251
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.99
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 165 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 320
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 179 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 358
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 359 VDE 367
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 179 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 358
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 359 VDE 367
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 179 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 358
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 359 VDE 367
DE
Sbjct: 116 ADE 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,266,208
Number of Sequences: 27780
Number of extensions: 550115
Number of successful extensions: 1401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3516412346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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