Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P05
         (1267 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.014

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.014
 Identities = 13/69 (18%), Positives = 24/69 (34%)
 Frame = -2

Query: 423 FFXXFFFF*EXKXFXNFFFFFXFFXXFXXFFFFPXXFFFXXXXXFFFXXFFFFXXXFFXX 244
           F+  F  F        ++F++ F      ++F+     F     F    ++F    FF  
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144

Query: 243 FFXXFFXXF 217
               F+  F
Sbjct: 145 CIYYFYCAF 153



 Score = 27.5 bits (58), Expect = 0.22
 Identities = 13/75 (17%), Positives = 24/75 (32%)
 Frame = -2

Query: 477 FFFXXFFFLXFFXFFFXXFFXXFFFF*EXKXFXNFFFFFXFFXXFXXFFFFPXXFFFXXX 298
           F     F+  F  F        ++F+         ++F+  F  F     F    ++   
Sbjct: 79  FTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138

Query: 297 XXFFFXXFFFFXXXF 253
             FF    ++F   F
Sbjct: 139 PLFFLLCIYYFYCAF 153



 Score = 25.8 bits (54), Expect = 0.69
 Identities = 18/75 (24%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
 Frame = -2

Query: 486 FFXFFFXXFFFLXFFXFFFXXFFXXFFFF*EXKXFXNFFFFFXFFXXFXXFF-FFPXXFF 310
           +F   F  F     F      FF  F  F     F   F FF     F     +F     
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLL 207

Query: 309 FXXXXXFFFXXFFFF 265
           F     +F+  F  F
Sbjct: 208 FLPCIYYFYSAFIIF 222



 Score = 24.2 bits (50), Expect = 2.1
 Identities = 18/95 (18%), Positives = 27/95 (28%), Gaps = 1/95 (1%)
 Frame = -2

Query: 498 FXXXFFXFFFXXFFFLXFFXFFFXXFFXXFFFF*EXKXFXNFFFFFXFFXXFXXFFFFPX 319
           F   F  F         +F + F      ++F      +  F  F          ++F  
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFIILLCVYYF------YYAFIIFTVHLLFLLCIYYFVV 138

Query: 318 XFFFXXXXXFFFXXFFFF-XXXFFXXFFXXFFXXF 217
             FF     +F+  F  F     F      FF  F
Sbjct: 139 PLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.133    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,212
Number of Sequences: 336
Number of extensions: 713
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37199482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)