Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P04
         (1232 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9X1Y6 Cluster: Putative uncharacterized protein; n=2; ...    38   0.70 
UniRef50_Q16U47 Cluster: Putative uncharacterized protein; n=1; ...    37   0.93 
UniRef50_UPI0000D55BD1 Cluster: PREDICTED: similar to CG7015-PA;...    37   1.2  
UniRef50_Q6NKN1 Cluster: RE66582p; n=4; Diptera|Rep: RE66582p - ...    37   1.2  
UniRef50_A7S5I4 Cluster: Predicted protein; n=2; Nematostella ve...    35   5.0  

>UniRef50_Q9X1Y6 Cluster: Putative uncharacterized protein; n=2;
           Thermotoga|Rep: Putative uncharacterized protein -
           Thermotoga maritima
          Length = 222

 Score = 37.5 bits (83), Expect = 0.70
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -3

Query: 681 VNLAVGTFSTEDY*TLYFS*VFCIRVKNLFYYQYITVNFMVSQFNLQRLQSFNQIIFIKS 502
           V +A G  +      LY   VF   +  + +  Y  +NF+VS FNLQ +Q  N I F  S
Sbjct: 75  VLVATGVLTAVVLYVLYRYLVFLAALVTVTFVAYYVINFLVSSFNLQSVQYMNWITFGLS 134

Query: 501 AF 496
            F
Sbjct: 135 VF 136


>UniRef50_Q16U47 Cluster: Putative uncharacterized protein; n=1; Aedes
            aegypti|Rep: Putative uncharacterized protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 982

 Score = 37.1 bits (82), Expect = 0.93
 Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 945  ETGIXEKLLHPYGSYN-AXRGSPSFFHFSQXXGIL 1046
            ETGI EKLLH YG      R +  FFHFSQ  G +
Sbjct: 148  ETGIIEKLLHSYGFIQCCERQARLFFHFSQFGGTI 182


>UniRef50_UPI0000D55BD1 Cluster: PREDICTED: similar to CG7015-PA; n=3;
            Endopterygota|Rep: PREDICTED: similar to CG7015-PA -
            Tribolium castaneum
          Length = 910

 Score = 36.7 bits (81), Expect = 1.2
 Identities = 19/33 (57%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 945  ETGIXEKLLHPYGSYN-AXRGSPSFFHFSQXXG 1040
            ETGI EKLLH YG      R +  FFHFSQ  G
Sbjct: 128  ETGIIEKLLHSYGFIQCCERQARLFFHFSQFSG 160



 Score = 35.1 bits (77), Expect = 3.7
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 636 MSSNPQWKMFQPPDSHSSPLQDILDLQHSNMQHKSS 743
           MS+NPQWK FQPPD+ +     I+D +      K+S
Sbjct: 1   MSTNPQWKSFQPPDTMNQD-SAIIDFKPMTSNGKAS 35


>UniRef50_Q6NKN1 Cluster: RE66582p; n=4; Diptera|Rep: RE66582p -
            Drosophila melanogaster (Fruit fly)
          Length = 1057

 Score = 36.7 bits (81), Expect = 1.2
 Identities = 19/33 (57%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 945  ETGIXEKLLHPYGSYN-AXRGSPSFFHFSQXXG 1040
            ETGI EKLLH YG      R +  FFHFSQ  G
Sbjct: 187  ETGIIEKLLHSYGFIQCCERQARLFFHFSQFSG 219


>UniRef50_A7S5I4 Cluster: Predicted protein; n=2; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 700

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 945  ETGIXEKLLHPYGSYN-AXRGSPSFFHFSQXXGIL 1046
            ETGI EKLLH YG      R    FFH+SQ  G L
Sbjct: 2    ETGIIEKLLHSYGFIQCCERELRIFFHYSQYKGDL 36


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 990,909,867
Number of Sequences: 1657284
Number of extensions: 18731824
Number of successful extensions: 42136
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42061
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 124315585013
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)