Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P04
         (1232 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   4.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   6.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   8.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   8.2  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 924 LSHIGMNCYWLKKM 883
           L  IG NC+W+ K+
Sbjct: 362 LFSIGFNCFWVMKL 375


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 671 RLEHFPLRITRHYIFLRFFV*ESKI 597
           +L+ FPL   RH I  + F  ES +
Sbjct: 471 KLQSFPLLSQRHQIDAKMFCNESSV 495


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 233 TFITIWFCVMFNY 195
           TF + W C + NY
Sbjct: 44  TFFSAWICALVNY 56


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 738 SSYRNGTYSSEYPSSPRDN 794
           + Y  G+Y++  P SP+D+
Sbjct: 85  TGYHLGSYAANCPPSPKDD 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,406
Number of Sequences: 336
Number of extensions: 5512
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)