Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P04
         (1232 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0097 - 27666456-27666719,27666837-27667022,27667233-276673...    30   4.3  

>05_07_0097 -
           27666456-27666719,27666837-27667022,27667233-27667387,
           27667488-27667620,27667718-27667908,27668078-27668513
          Length = 454

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 847 MLMDVQWVTQHIHLLQPITVHPNMTQSITHL 939
           ++M + +  QH+H L P  VHP++  S   L
Sbjct: 268 IIMGIAYCIQHMHELNPANVHPDLHSSAVFL 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,181,701
Number of Sequences: 37544
Number of extensions: 497335
Number of successful extensions: 1042
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)