Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_P03
(1235 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 89 8e-18
AF100655-8|ABO16452.1| 470|Caenorhabditis elegans Hypothetical ... 30 2.9
AF100655-6|ABO16453.1| 470|Caenorhabditis elegans Hypothetical ... 30 2.9
AF100655-4|ABO16447.1| 470|Caenorhabditis elegans Hypothetical ... 30 2.9
AF045643-2|AAC02596.2| 663|Caenorhabditis elegans Hypothetical ... 30 2.9
U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical pr... 30 3.9
AL132943-9|CAB81982.1| 233|Caenorhabditis elegans Hypothetical ... 29 5.1
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
F10F2.2 protein.
Length = 1343
Score = 88.6 bits (210), Expect = 8e-18
Identities = 64/208 (30%), Positives = 105/208 (50%)
Frame = +2
Query: 389 DLSTELCYHVELAEGCEYLNINQIKVLKWLLSSPLQPQAVRNETIFKSNDNSQLLIEIGP 568
D+S E CYHV + + E ++ N K++ L SP + + + + + IEIGP
Sbjct: 34 DVSVEYCYHV-ITQEPELISSNWEKLVTLLSHSPFETSVWKESQLHPEHGKN---IEIGP 89
Query: 569 RFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGKQKNVTEKHFENLAAVLHDRMT 748
R TA +N + I ES G+++V R+E RYL+ + +V F +AA D+MT
Sbjct: 90 RTAVKTAACTNILSIFESSGIKNVERIERGIRYLV----EDDVDVNEFFEIAA---DKMT 142
Query: 749 QCVYTKDNLPRKSFNEGLPKDLEPWFVVPLQEQGISAMRKVMIN*VGI*YMGHGIYMDLF 928
+ +Y D F++ +E F++ + E + ++ + + + Y D F
Sbjct: 143 EAIYGND----VKFDDE-SHQIEKVFLIDVLESKQNLIKANEELGLALDQLDLDFYYDFF 197
Query: 929 VNKLKRDPTSVXLFDXXXSNXEHSRXGF 1012
VNK+K++PT V LFD S+ EHSR F
Sbjct: 198 VNKVKKNPTDVELFDLAQSDSEHSRHWF 225
>AF100655-8|ABO16452.1| 470|Caenorhabditis elegans Hypothetical
protein C44C8.8 protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +2
Query: 536 DNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGKQKNVTEKHFE 715
DN+QL I P +FST SS ++Q + D++ + + ++ F + +K +
Sbjct: 306 DNNQLFEAIKPILDFSTPLSSITLQFGHQINFEDLI---IRSTEIMYFEGYFLLLDKDLD 362
Query: 716 NLAAVLHDRM 745
NL + H R+
Sbjct: 363 NLNELRHKRV 372
>AF100655-6|ABO16453.1| 470|Caenorhabditis elegans Hypothetical
protein C44C8.9 protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +2
Query: 536 DNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGKQKNVTEKHFE 715
DN+QL I P +FST SS ++Q + D++ + + ++ F + +K +
Sbjct: 306 DNNQLFEAIKPILDFSTPLSSITLQFGHQINFEDLI---IRSTEIMYFEGYFLLLDKDLD 362
Query: 716 NLAAVLHDRM 745
NL + H R+
Sbjct: 363 NLNELRHKRV 372
>AF100655-4|ABO16447.1| 470|Caenorhabditis elegans Hypothetical
protein C44C8.10 protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +2
Query: 536 DNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGKQKNVTEKHFE 715
DN+QL I P +FST SS ++Q + D++ + + ++ F + +K +
Sbjct: 306 DNNQLFEAIKPILDFSTPLSSITLQFGHQINFEDLI---IRSTEIMYFEGYFLLLDKDLD 362
Query: 716 NLAAVLHDRM 745
NL + H R+
Sbjct: 363 NLNELRHKRV 372
>AF045643-2|AAC02596.2| 663|Caenorhabditis elegans Hypothetical
protein F58H7.7 protein.
Length = 663
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +2
Query: 536 DNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGKQKNVTEKHFE 715
DN+QL I P +FST SS ++Q + D++ + + ++ F + +K +
Sbjct: 306 DNNQLFEAIKPILDFSTPLSSITLQFGHQINFEDLI---IRSTEIMYFEGYFLLLDKDLD 362
Query: 716 NLAAVLHDRM 745
NL + H R+
Sbjct: 363 NLNELRHKRV 372
>U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical
protein C32B5.9 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +2
Query: 506 VRNETIFKSNDNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGK 685
V N +F S+DN+QL I P +FST SS ++ + D + T Y F
Sbjct: 38 VHNLQLF-SSDNNQLFEAIKPILDFSTPLSSITLYFGYKINYEDPIIRSTETLY---FDG 93
Query: 686 QKNVTEKHFENLAAVLHDRM 745
+ + ENL + H R+
Sbjct: 94 YFLLLDNDLENLNKLRHKRV 113
>AL132943-9|CAB81982.1| 233|Caenorhabditis elegans Hypothetical
protein Y116F11B.13 protein.
Length = 233
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 386 KDLSTELCYHVELAEGCEY-LNINQIKVLKWLLSSPLQPQAVRNETIFKSNDNSQ 547
K+ +T C E C+ N + + V L+S+ + P+ V+NETI + ND+ +
Sbjct: 139 KNEATRNCQRYERRSRCDGGRNEDGLCVPGLLVSTTIPPKTVKNETIEEENDDKE 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,689,202
Number of Sequences: 27780
Number of extensions: 464408
Number of successful extensions: 1026
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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