Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P01
         (1230 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   6.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   8.2  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 573 GRATDHHHFTGAGTVVD 523
           G A   H +TG GTV++
Sbjct: 246 GEAISKHEYTGFGTVIE 262


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 573 GRATDHHHFTGAGTVVD 523
           G A   H +TG GTV++
Sbjct: 247 GEAISKHEYTGFGTVIE 263


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 573 GRATDHHHFTGAGTVVD 523
           G A   H +TG GTV++
Sbjct: 247 GEAISKHEYTGFGTVIE 263


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 706 QVAASVLCRGPEPSPE 659
           Q  A + C GP P PE
Sbjct: 166 QFLAIIACMGPPPQPE 181


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 689 NRCSDLRSSPRNTETDICLRXTGWTG 766
           N C +  +  +N     CL   GWTG
Sbjct: 106 NPCENQATCVQNKNQYQCLCGVGWTG 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,821
Number of Sequences: 336
Number of extensions: 4474
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35966350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)