Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_P01
         (1230 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   4.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   6.0  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 724 VSWRASQVAASVLCRGPEPSPESSRCPQPRATL 626
           +S RAS  +ASV CR    S      P+PR  L
Sbjct: 37  MSTRASARSASVDCRSSLASGSKLFAPEPRVAL 69


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 607 QGMFDLRVWPGVEGSEKTPGKAPDRGKEQMQRLAKL----AKKHRNGHLPKV 750
           QGM   R  PG+EG    PG   ++G   +  ++ L     +K + G  P++
Sbjct: 659 QGMKGDRGMPGLEGVAGLPGMVGEKGDRGLPGMSGLNGAPGEKGQKGETPQL 710


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,584
Number of Sequences: 2352
Number of extensions: 19034
Number of successful extensions: 51
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)