Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O22
         (1298 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29096-2|AAX88830.1|  133|Caenorhabditis elegans Hypothetical pr...    33   0.44 

>U29096-2|AAX88830.1|  133|Caenorhabditis elegans Hypothetical
           protein F30H5.5 protein.
          Length = 133

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = +2

Query: 176 AHLKSNALSITKLNVASTNQLFTLVKXADRXKSLVIYFSTNVLLTXYCWQVYXSIIQANV 355
           AH+K+  ++   +N  +T QLFTL    D     +     N+      W  Y SI+    
Sbjct: 34  AHIKAIQVATRSMNETATRQLFTL----DYNNPKI-----NINTVMLVWGSYDSIVPLYA 84

Query: 356 VF*NGRDP*FQQVV 397
            F NGR+P + Q +
Sbjct: 85  EFFNGRNPPYSQFI 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,359,750
Number of Sequences: 27780
Number of extensions: 157788
Number of successful extensions: 350
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3621523944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)