Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O21
         (1290 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0451 - 25323178-25323241,25323614-25323741,25324533-253246...    34   0.28 
10_05_0074 - 8865884-8866567,8866612-8866923                           29   6.0  
06_03_0609 + 22710442-22713502,22713596-22713948                       29   8.0  
06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171     29   8.0  

>04_04_0451 -
           25323178-25323241,25323614-25323741,25324533-25324634,
           25325314-25325382,25325489-25325557,25325646-25325720,
           25325805-25325909,25326394-25326492,25326626-25328344,
           25328629-25328931,25329031-25329129,25329733-25329850,
           25329933-25330018,25330091-25330159,25330232-25330306,
           25330675-25330772,25331271-25331432,25332391-25332556,
           25332902-25332970,25333064-25333126,25333221-25333376,
           25334027-25334365
          Length = 1410

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = -2

Query: 653 GLSCLGLGTRTHISSPQTNS*LSDSEYSSNTLMKASE*SLIFGFSCRCSASILSILADRL 474
           G S LG GT   ++  +T +  SDS +SSNTL + S+   +   S R   S+L+   +++
Sbjct: 534 GTSALGYGTSAIVAMDKTAAISSDSSFSSNTL-RLSQSKTVGRSSERSLESVLNSSKEKV 592

Query: 473 SA 468
           SA
Sbjct: 593 SA 594


>10_05_0074 - 8865884-8866567,8866612-8866923
          Length = 331

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 428 GMVLLSKWSALVWTPTICPRGSIGY*RNIGKKIRRLMIIQMPSSK 562
           G V LS W   +++ T C  G   + R++G+ +    I   PS++
Sbjct: 190 GAVSLSAWFGTIYSRTACFAGLAHFVRSMGRGVEAAQIAPSPSAR 234


>06_03_0609 + 22710442-22713502,22713596-22713948
          Length = 1137

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = +1

Query: 163 LTMRWYNGSIAEAVNLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESNFLAV 342
           L+  + +GSI++ V      N + + +    N LS ++ STL+  VV   L  +SNF   
Sbjct: 616 LSYNYLSGSISDEVGNLVNLNKLIISY----NRLSGDIPSTLSQCVVLEYLEMQSNFFVG 671

Query: 343 NLKSGSTN 366
           ++     N
Sbjct: 672 SIPQTFVN 679


>06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171
          Length = 916

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = +1

Query: 163 LTMRWYNGSIAEAVNLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESNFLAV 342
           L+  + +GSI++ V      N + + +    N LS ++ STL+  VV   L  +SNF   
Sbjct: 396 LSYNYLSGSISDEVGNLVSLNKLIISY----NRLSGDIPSTLSQCVVLEYLEMQSNFFVG 451

Query: 343 NLKSGSTN 366
           ++     N
Sbjct: 452 SIPQTFVN 459


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,924,265
Number of Sequences: 37544
Number of extensions: 497138
Number of successful extensions: 1802
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)