Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O21
         (1290 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-8|AAA28196.1|  469|Caenorhabditis elegans Hypothetical pr...    59   8e-09
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    33   0.44 
U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical pr...    32   0.77 
U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical pr...    32   0.77 
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ...    30   4.1  
U40410-4|AAA81393.1|  259|Caenorhabditis elegans Hypothetical pr...    29   9.5  

>L15313-8|AAA28196.1|  469|Caenorhabditis elegans Hypothetical
           protein ZK353.8 protein.
          Length = 469

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = +1

Query: 169 MRWYNGSIAEAVNLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESNFLAVNL 348
           M+W+ G++A A+ +S++   + +V+I  D++           +   + L      + + L
Sbjct: 1   MQWFGGNVATAIQISRKNKALLIVYITTDSEDGQIFDGFWQHIDSSNLLCA---VVGIKL 57

Query: 349 KSGSTNYTHFAQIYQIVPVPSLFFIGRNGTPLEVV--CAGVDADNLSARIDRILAE 510
           K+G T+   FA IY    +P+ + I +NG PLEV+    G   D   A+ D+  A+
Sbjct: 58  KAGETSAQQFADIYPTPILPAAYLIDQNGKPLEVITPLVGKTYDQFRAKFDKATAQ 113


>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
           protein M18.5 protein.
          Length = 1134

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +1

Query: 250 GDNDLSDEMSSTLNDVVVRSKLSNESNFLAVNLKSGSTNYTHFAQIYQ-IVPVPSLFFIG 426
           G+  ++D ++   N VV       +S  + +  +    +Y+   + Y  I P+  +  + 
Sbjct: 303 GETSIADSINYIDNGVVFVGSRLGDSQLIRLMTEPNGGSYSVILETYSNIGPIRDMVMVE 362

Query: 427 RNGTPLEVVCAGVDADNLSARIDR 498
            +G P  V C G D D  S R+ R
Sbjct: 363 SDGQPQLVTCTGADKDG-SLRVIR 385


>U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical
           protein C35D10.7b protein.
          Length = 486

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 430 NGTPLEVVCAGVDADNLSARIDRI---LAEHRQENPKINDHSDAFIKVLDEYSE 582
           +G  L++  A V A NL   ++ +   L +H+     +ND  + FIK L+E+++
Sbjct: 82  HGDHLQMQVASVIASNLGPMVEIVEKKLLQHKNAEKLLNDGREVFIKTLEEHNQ 135


>U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical
           protein C35D10.7a protein.
          Length = 537

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 430 NGTPLEVVCAGVDADNLSARIDRI---LAEHRQENPKINDHSDAFIKVLDEYSE 582
           +G  L++  A V A NL   ++ +   L +H+     +ND  + FIK L+E+++
Sbjct: 133 HGDHLQMQVASVIASNLGPMVEIVEKKLLQHKNAEKLLNDGREVFIKTLEEHNQ 186


>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
           protein F54G2.2 protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 487 RIDRILAEHRQENPKINDHSDAFIKVLDEYSE-SDNYELVCGDE 615
           RIDR+  +  Q N  +ND    F+  LD + E  D   L C  E
Sbjct: 626 RIDRVQQQQTQPNSSVNDVERDFVHTLDVFPECCDAVSLNCFQE 669


>U40410-4|AAA81393.1|  259|Caenorhabditis elegans Hypothetical
           protein C54G7.1 protein.
          Length = 259

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 442 EEYHSCR*RIMTAPARFDIFVRNVYSWLIHSSD*RPESLIHLRVSI*P 299
           +EYHSC  R    PA+ +I ++    W+I   D R ++    RV+I P
Sbjct: 75  DEYHSCLQRCPNVPAK-EILIKGQNVWMILCHDFRNDT--DFRVNIVP 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,582,555
Number of Sequences: 27780
Number of extensions: 425716
Number of successful extensions: 1238
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)