Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O20
         (1292 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1751 - 29215074-29216270                                         33   0.65 
12_02_0299 - 17051570-17052474,17053542-17053755                       32   1.1  
03_05_0067 - 20460206-20460703,20461255-20461530                       31   1.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   3.5  
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137...    30   4.6  
10_08_0072 - 14655379-14656608                                         25   5.4  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   6.0  
03_02_0122 - 5742530-5743705                                           29   8.0  

>07_03_1751 - 29215074-29216270
          Length = 398

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 18/44 (40%), Positives = 18/44 (40%)
 Frame = +1

Query: 217 GGAPXXGGGXGPXKKKKXXGGGXXXKKKGXKKXFFXXKGGGXGG 348
           GG    GGG G  K     GGG      G    F   KGGG GG
Sbjct: 284 GGGAGAGGGFGGGKGGGFGGGGGGGGGAGAGGGFGGGKGGGFGG 327


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/43 (41%), Positives = 18/43 (41%)
 Frame = -1

Query: 344 PXPPPFXXKXLFFXPFFFXXXPPPXXFFFFXGPXPPPXXGAPP 216
           P PPPF    L   PF     PPP  F F   P PP     PP
Sbjct: 234 PPPPPFLPFPLPPIPFLTPPSPPPPAFPF---PLPPWPWAPPP 273



 Score = 30.7 bits (66), Expect = 2.6
 Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
 Frame = -1

Query: 389 FXXXFFXPXFXXQKPPXPPPFXXKXLFFXPFFFXXXPP-----PXXFFFFXGPXPPPXXG 225
           F      P F    PP PPP      F  PF F   PP     P   F+   P PPP   
Sbjct: 275 FPFPHLPPIFSPPSPPPPPP----PAF--PFPFPQLPPLPHFPPLPSFYPSPPPPPPPPP 328

Query: 224 APP 216
            PP
Sbjct: 329 PPP 331


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = -3

Query: 345 PXPPPFXXKKXFFXPLFFXXXPPPXXFFFFXGAPXPPXXGGPPP 214
           P PPP         P +F   PPP    +F GA  P    G PP
Sbjct: 4   PPPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPP 47


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = -2

Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
           PP     PPPP    F  GP PP    PPP
Sbjct: 55  PPPPPPGPPPPHQPQFNFGPGPPQQQQPPP 84


>10_08_0161 +
           15312986-15313160,15313250-15313557,15313676-15313754,
           15313856-15314373
          Length = 359

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 215 GGGPPXXGGXGAPXKKKKXXGGGXXXKKRGXKK 313
           GGG    GG G    KK+  GGG   K  G +K
Sbjct: 236 GGGDKKDGGGGDKKDKKEGGGGGGDKKDAGGEK 268


>10_08_0072 - 14655379-14656608
          Length = 409

 Score = 24.6 bits (51), Expect(2) = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 864 PPPPPPGXXGGXFF 823
           PPPPPP      FF
Sbjct: 125 PPPPPPSLDANKFF 138



 Score = 23.4 bits (48), Expect(2) = 5.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 879 LXXKXPPPPPP 847
           L  K PPPPPP
Sbjct: 119 LGDKLPPPPPP 129


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -2

Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
           PP+    PPPP    +   P  P    PPP
Sbjct: 440 PPYASYPPPPPGSSMYNPPPPAPGQATPPP 469



 Score = 29.1 bits (62), Expect = 8.0
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 347 PPXPPPFXXKXLFFX--PFFFXXXPPPXXFFFFXGPXPPPXXGAPPXXG 207
           PP PPP     + +   P +    PPP     +  P P P    PP  G
Sbjct: 423 PPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPPYG 471


>03_02_0122 - 5742530-5743705
          Length = 391

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 217 GGAPXXGGGXGPXKKKKXXGGG--XXXKKKGXKKXFFXXKGGGXGG 348
           GG     GG G  KKK   GGG     +++  KK      GGG GG
Sbjct: 111 GGKYQDEGGEGKYKKKPGHGGGRYEEEEEEDYKKKPTSGGGGGYGG 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.311    0.147    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,559,105
Number of Sequences: 37544
Number of extensions: 532718
Number of successful extensions: 4751
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4331
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4027319592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)