Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O20
         (1292 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +1

Query: 217 GGAPXXGGGXGPXKKKKXXGGGXXXKKKGXKKXFFXXKGGGXGG 348
           GGAP  GGG          GGG   + +  +      +GGG GG
Sbjct: 209 GGAPG-GGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGG 251



 Score = 21.4 bits (43), Expect(2) = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 845 PGGGGGG 865
           PGGGGGG
Sbjct: 224 PGGGGGG 230



 Score = 21.0 bits (42), Expect(2) = 6.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 848 GGGGGGXXXXXGXG 889
           GGGGGG     G G
Sbjct: 250 GGGGGGGMQLDGRG 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.147    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,239
Number of Sequences: 2352
Number of extensions: 9234
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 148783908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)