Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O20
(1292 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.33
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 1.0
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 3.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 3.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.1
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 29 5.4
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 5.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.4
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 303 PLFFXXXPPPXXFFFFXGAPXPPXXGGPPPXG 208
P+F PPP + AP PP G PPP G
Sbjct: 700 PMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQG 731
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP F P PP GG PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP F PPP P PP G PPP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = -2
Query: 304 PPFFXXXPP-----PPXFFFFXXGPXPPXXGGPPP 215
PP F PP PP F GP PP PPP
Sbjct: 324 PPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 354 PKTPXPPPFXXKKXFFXPLFFXXXPPPXXFFFFXGAPXPPXXGGPPPXG 208
P PPPF FF P PPP F G P PP PP G
Sbjct: 285 PYAMMPPPFG----FFPPPPRGHFPPPPPHFMGRGMP-PPFMPPPPHFG 328
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = -2
Query: 304 PPFFXXXPP-----PPXFFFFXXGPXPPXXGGPPP 215
PP F PP PP F GP PP PPP
Sbjct: 324 PPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 354 PKTPXPPPFXXKKXFFXPLFFXXXPPPXXFFFFXGAPXPPXXGGPPPXG 208
P PPPF FF P PPP F G P PP PP G
Sbjct: 285 PYAMMPPPFG----FFPPPPRGHFPPPPPHFMGRGMP-PPFMPPPPHFG 328
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP G PP GGPPP
Sbjct: 720 PPITGGPPPPPP-----PGGLPPITGGPPP 744
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP G PP GGPPP
Sbjct: 736 PPITGGPPPPPP-----PGGLPPISGGPPP 760
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXG-PXPPXXGGPPP 215
PP PPPP G P PP GG PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP G PP GGPPP
Sbjct: 720 PPITGGPPPPPP-----PGGLPPITGGPPP 744
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP G PP GGPPP
Sbjct: 736 PPITGGPPPPPP-----PGGLPPISGGPPP 760
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXG-PXPPXXGGPPP 215
PP PPPP G P PP GG PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP G PP GGPPP
Sbjct: 303 PPITGGPPPPPP-----PGGLPPITGGPPP 327
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
PP PPPP G PP GGPPP
Sbjct: 319 PPITGGPPPPPP-----PGGLPPISGGPPP 343
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 304 PPFFXXXPPPPXFFFFXXG-PXPPXXGGPPP 215
PP PPPP G P PP GG PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -2
Query: 283 PPPPXFFFFXXGPXP--PXXGGPPP 215
PPPP F F GP P P PPP
Sbjct: 235 PPPPGFQGFQQGPPPSAPVYSAPPP 259
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 301 PFFXXXPPPPXFFFFXXGPXPPXXGGPPP 215
P F PPPP +FF P P GPPP
Sbjct: 18 PDFFERPPPPDWFF----PGPLRPWGPPP 42
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = -2
Query: 304 PPFFXXXPPPPXFF---FFXXGPXPP--XXGGPPP 215
P FF PPP FF GP PP GPPP
Sbjct: 18 PDFFERPPPPDWFFPGPLRPWGPPPPWHRNRGPPP 52
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -3
Query: 354 PKTPXPPPFXXKKXFFXPLFFXXXPPPXXFFFFXGAPXPPXXGGPPP 214
P PPP K PL PPP G+P PP G PPP
Sbjct: 232 PPAGSPPPPPPPKGS-PPLAGSGSPPPPPA---AGSPPPPRTGSPPP 274
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -3
Query: 354 PKTPXPPPFXXKKXFFXPLFFXXXPPPXXFFFFXGAPXPPXXGGPPP 214
P PPP K PL PPP G+P PP G PPP
Sbjct: 253 PPAGSPPPPPPPKGS-PPLAGSGSPPPPPA---AGSPPPPRTGSPPP 295
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -3
Query: 354 PKTPXPPPFXXKKXFFXPLFFXXXPPPXXFFFFXGAPXPPXXGGPPP 214
P PPP K PL PPP G+P PP G PPP
Sbjct: 238 PPAGSPPPPPPPKGS-PPLAGSGSPPPPPA---AGSPPPPRTGSPPP 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.147 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,784,760
Number of Sequences: 27780
Number of extensions: 316917
Number of successful extensions: 1751
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3620756926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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