Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O19
(1253 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 93 6e-20
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 49 1e-06
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 48 4e-06
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 47 5e-06
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 47 6e-06
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 46 8e-06
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 46 1e-05
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 44 4e-05
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 41 3e-04
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 41 3e-04
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 39 0.002
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 38 0.002
SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi... 37 0.005
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb... 36 0.009
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 36 0.009
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 35 0.027
SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein 1|Schizosaccharom... 35 0.027
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 34 0.036
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 33 0.083
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 32 0.19
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 32 0.19
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 31 0.33
SPAC343.03 |apc11||anaphase-promoting complex subunit Apc11|Schi... 30 0.58
SPAC343.18 |rfp2||ubiquitin-protein ligase E3 Rfp2|Schizosacchar... 29 1.3
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 29 1.3
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 29 1.8
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 29 1.8
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 29 1.8
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 28 2.4
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.1
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 27 7.2
SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyce... 26 9.5
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 93.5 bits (222), Expect = 6e-20
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +2
Query: 548 FVLVGAPGDYVFGGEGLDAVVTQLLGQLE-NSGPPPLPRDQLAALPQEILTEDHAAKGTA 724
F L G PGDY +G GLD +++QL+ Q + ++ P P P D +A + + ++ +
Sbjct: 336 FNLSGNPGDYAWGARGLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGE 395
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWLQLHATCPICR 850
C++C E F+ + V +L C+H FH +CI PWL+++ TC ICR
Sbjct: 396 CTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR 437
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 635 NSGPPPLPRDQLAALPQ-EILTEDHAAKGTACSVCWENFETGET--VSRLECEHLFHSSC 805
N PP+ R A E L+ D T C +C+++ + +++ C H+F +C
Sbjct: 77 NPFQPPVKRAVKEAWDSFEPLSNDQLMDLT-CPICYDDMNENDEKQATKMPCGHIFGKNC 135
Query: 806 ISPWLQLHATCPICRR 853
+ WL+ H TCP+CR+
Sbjct: 136 LQKWLENHCTCPLCRK 151
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 47.6 bits (108), Expect = 4e-06
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 725 CSVCWENFETGETVSRL-ECEHLFHSSCISPWL-QLHATCPICR 850
C VC NFE + RL +C H FH CI WL +CP+CR
Sbjct: 525 CLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCR 568
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 47.2 bits (107), Expect = 5e-06
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 707 AAKGTACSVCWENFETGETVSRLECEHLFHSSCISPWL-QLHATCPIC 847
A G C +C E+F G+ V L C+H FH CI+ W+ CP C
Sbjct: 315 ATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTC 362
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 46.8 bits (106), Expect = 6e-06
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 722 ACSVCWENFETGETVSRLE-CEHLFHSSCISPWLQL-HATCPICR 850
+C +C E + G+ +L+ C+H FH +CI WL + +CP+CR
Sbjct: 765 SCLICLETYTNGDICRKLQACKHFFHQACIDQWLTTGNNSCPLCR 809
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 46.4 bits (105), Expect = 8e-06
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWL-QLHATCPIC 847
C +C+ ++ + + L CEH+FH+ CI W+ + A+CP+C
Sbjct: 205 CIICYADYAFDDILRVLPCEHVFHTQCIDTWMTTMKASCPLC 246
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 45.6 bits (103), Expect = 1e-05
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 761 TVSRLECEHLFHSSCISPWLQLHATCPICRRS 856
T RL C H+ H C+ WL+ TCPICRRS
Sbjct: 322 TPKRLPCGHILHFHCLRNWLERQQTCPICRRS 353
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 44.0 bits (99), Expect = 4e-05
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 692 LTEDHAAKGTACSVCWENFETGETVSRLE-CEHLFHSSCISPWLQLHAT-CPI 844
L+E G C +C+E F G+ V+R+E C +FH C WL A CP+
Sbjct: 219 LSETSPCLGQECIICFEEFAAGDRVARIEYCLCIFHLKCYRDWLSTGAAGCPV 271
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 41.1 bits (92), Expect = 3e-04
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 755 GETVSRLECEHLFHSSCISPWLQLHATCPICR 850
G ++++ C H FH+ C+ W ++ TCP+CR
Sbjct: 48 GLRIAKIPCGHYFHNHCLESWCRVANTCPLCR 79
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 725 CSVCW-ENFETGETVSRLECEHLFHSSCISPWLQLHA-TCPICRRS 856
C++C E E L C H+FH +CI P+L ++ CP+C++S
Sbjct: 498 CTICLCEYSEESPLYRELPCHHIFHPACIDPYLLKNSDLCPLCKQS 543
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 38.7 bits (86), Expect = 0.002
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 779 CEHLFHSSCISPWLQLHATCPICR 850
C HL+H C+ W++ + CP+CR
Sbjct: 647 CHHLYHRQCLLQWMETRSICPVCR 670
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 725 CSVCWENFETGET-VSRLECEHLFHSSCISPWLQLHATCPICR 850
C VC E ++ T + + C+H FH C+ W +++CP+CR
Sbjct: 208 CVVCLERMDSSITGLITIVCQHTFHCPCLQKW--GNSSCPVCR 248
>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWLQLHATCPICR 850
CS+C E EC H+F SCI+ W + CP+CR
Sbjct: 256 CSLCMEFIHCPAAT---ECGHIFCWSCINGWTSKKSECPLCR 294
>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWLQLHATCPICR 850
C +C E F S C H F S CI +L+ H CP CR
Sbjct: 29 CLICHEYFRAPLITS---CSHTFCSFCIRDYLREHPMCPACR 67
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 36.3 bits (80), Expect = 0.009
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLEC---EHLFHSSCISPWLQL--HATCPICRRS 856
C++C+ T+ C H FH+SC+ W + + CP+CR S
Sbjct: 1558 CAICYSVLSVERTLPNKRCGTCRHKFHASCLYKWFKSSNSSRCPLCRSS 1606
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 34.7 bits (76), Expect = 0.027
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWLQLHATCPICR 850
C +C + + G + C HL+ S C+ WL+ ++CP+C+
Sbjct: 1092 CIICRDIIKQGFITT---CGHLYCSFCLEAWLKHSSSCPMCK 1130
>SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 34.7 bits (76), Expect = 0.027
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 761 TVSRLECEHLFHSSCISPWLQLHATCPICRR 853
TV+ C H FH CIS WL CP+ R
Sbjct: 68 TVAWGTCNHAFHFHCISRWLNTRNVCPLDNR 98
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 725 CSVCWEN-FETGETVSRLECEHLFHSSCISPWLQLHATCPICRRS 856
C +C E F + E V L C H H C +++ + CP C ++
Sbjct: 271 CPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIRTNYRCPTCYKT 315
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 33.1 bits (72), Expect = 0.083
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEH-LFHSSCISPWLQLHATCPICRR 853
C +C + + G C H F SCI W+ TCPIC+R
Sbjct: 21 CVICLQ--KDGLRAQLSPCGHDQFDYSCICRWMDQSLTCPICKR 62
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWLQ-LHATCPIC 847
CSVC NF ++ C H F S+C+ P+ + +TCP C
Sbjct: 639 CSVC--NFSNWKSKLIPNCGHAFCSNCMEPFYEHKTSTCPQC 678
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 713 KGTACSVCWENFETGETVSRLECEHLFHSSCISPWLQLHATCPICRR 853
K C +C E + T C H + C+ WL+ +CP CR+
Sbjct: 81 KTLECPICTEALQRPFTT---HCGHTYCYECLLNWLKESKSCPTCRQ 124
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 31.1 bits (67), Expect = 0.33
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 725 CSVCWENFETGETV-SRLECEHLFHSSCISPW 817
CSVC + ++ S C H+FH SCI W
Sbjct: 197 CSVCTDTINPSTSIWSCGTCYHVFHLSCIRKW 228
>SPAC343.03 |apc11||anaphase-promoting complex subunit
Apc11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 94
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 776 ECEHLFHSSCISPWLQLHAT---CPICRRS 856
+C+H+FH+ CI WL + CP+ R++
Sbjct: 51 KCKHIFHAHCIQNWLATSGSQGQCPMDRQT 80
>SPAC343.18 |rfp2||ubiquitin-protein ligase E3
Rfp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 205
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 704 HAAKGTACSVCWENFETGE--TVSRLECEHLFHSSCISPWLQLHATCPI--CRR 853
H AC+ C + E ++ +C HLF S+C + CP+ CR+
Sbjct: 140 HPHNNIACAKCGNELVSDEKKSIFAAKCGHLFCSTCAKELRKKTVPCPVQHCRK 193
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 607 YCV*AFSSKNIVSRCSDKYKWCTSSCSTSARPPGSHH 497
YC+ A SS+ +V ++ + + +++ARPP SHH
Sbjct: 192 YCIFADSSEKMVVSSEEQIICISLNPNSAARPPFSHH 228
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 578 VFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDHAAKG 718
VF GE LLG+ E SG PP PR +PQ +T D A G
Sbjct: 440 VFEGERARTKDCNLLGKFELSGIPPAPR----GVPQIEVTFDVDANG 482
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 578 VFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDHAAKG 718
VF GE LLG+ E SG PP PR +PQ +T D A G
Sbjct: 440 VFEGERARTKDCNLLGKFELSGIPPAPR----GVPQIEVTFDVDANG 482
>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
E3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 773 LECEHLFHSSCISPWLQLHATCPI 844
L C H H+S S W H CP+
Sbjct: 872 LNCGHGAHASHASEWFSTHTICPV 895
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 578 VFGGEGLDAVVTQLLGQLENSGPPPLPRDQ 667
V+ GE ++ + LG+ + +G PP+PR Q
Sbjct: 445 VYQGERVNCAENEPLGEFQLTGIPPMPRGQ 474
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +2
Query: 677 LPQEILTEDHAAKGTACSVCWENFETGETVSRLECEHLFHSSCISPWLQLHATCPICR 850
L E L +++ ++ C +C+ VS C H F C+ L CP CR
Sbjct: 153 LHMEDLLQENVSRELECQICF-GMLYDPVVS--PCGHTFCGPCLMQALTQSPQCPTCR 207
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 725 CSVCWENFETGETVSRLECEHLFHSSCISPWL-QLHA--TCPICRR 853
C +C + + C H +H CI P L + H +C ICR+
Sbjct: 192 CCICLMPVLPCQALFVAPCSHSYHYKCIRPTLNESHPYFSCFICRK 237
>SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.2 bits (55), Expect = 9.5
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = -2
Query: 421 IVKHWWWCLALCRVLCLICIITC 353
+++ W W L + C C++ C
Sbjct: 186 VIQRWQWFLLAVAIQCFNCVLAC 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,190,964
Number of Sequences: 5004
Number of extensions: 52659
Number of successful extensions: 158
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 679614876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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