Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O18
         (1492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.35 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    29   0.46 

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.35
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGG 1291
            GGGG   G        GGGG+ +    + ++  GGG
Sbjct: 213  GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGG 248



 Score = 25.0 bits (52), Expect = 5.6
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = +1

Query: 1234 GGGXKKXXXXKKKKKXXGGGGXXXXKKKKXXFFXKKKXGGGXXXXGGG 1377
            GGG              GGGG    + +      +++ GGG    GGG
Sbjct: 208  GGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 0.46
 Identities = 25/83 (30%), Positives = 32/83 (38%)
 Frame = +2

Query: 662  GXEXGGGGGXFXX*XXGVXGGXXKKXEKKKKLXFXXGEKXPXKKKXGXKKXXGXXKKXKX 841
            G E GGGGG       G      +K EKK +     G     K+K   +   G     + 
Sbjct: 916  GGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEK-ARRGSGGDSDSEEE 974

Query: 842  WGEKKXGXFFXEKKKXXGGXKKK 910
             GE   G    +KK   GG KK+
Sbjct: 975  EGE---GSRKRKKKGASGGQKKR 994



 Score = 25.8 bits (54), Expect = 3.2
 Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
 Frame = +2

Query: 1136 KKKXXXXXXXXXXXXXGGGGXXGGXXXXXXKXGGGG---KKKXXXXKKKKXXGGGGXXXX 1306
            KKK               GG  GG      + G G    +K+    K +K  GGGG    
Sbjct: 898  KKKGGRGRKDYISDSDASGGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKR 957

Query: 1307 XKK 1315
             +K
Sbjct: 958  KEK 960


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,319
Number of Sequences: 2352
Number of extensions: 9309
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 174343455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)