Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O18
         (1492 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3444|AAF51657.1|   98|Drosophila melanogaster CG11458-P...    35   0.25 
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    32   2.3  
BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p pro...    32   2.3  
AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    32   2.3  
AE013599-3071|AAF46625.1|  239|Drosophila melanogaster CG15225-P...    31   3.1  
U13178-1|AAA86955.1|  404|Drosophila melanogaster RNA binding pr...    31   5.4  
M15765-1|AAA70425.1|  365|Drosophila melanogaster unknown protei...    31   5.4  
L37083-1|AAC41563.1|  404|Drosophila melanogaster RNA binding pr...    31   5.4  
BT029607-1|ABL75666.1|  337|Drosophila melanogaster IP17050p pro...    31   5.4  
BT023644-1|AAY85044.1|  114|Drosophila melanogaster IP05560p pro...    30   7.1  
AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA ...    30   7.1  
AE014296-852|AAF47904.2|  242|Drosophila melanogaster CG11345-PA...    30   7.1  
AE013599-3023|AAF57461.1|  114|Drosophila melanogaster CG13428-P...    30   7.1  
X71975-1|CAA50795.1|  239|Drosophila melanogaster GCR 101 protein.     30   9.4  
AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA...    30   9.4  

>AE014296-3444|AAF51657.1|   98|Drosophila melanogaster CG11458-PA
            protein.
          Length = 98

 Score = 35.1 bits (77), Expect = 0.25
 Identities = 22/64 (34%), Positives = 23/64 (35%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG      K GGGG        +K   GGGG                 GGG   
Sbjct: 21   GGGGGGGGGQGGWQKNGGGGGGGGQGGWQKGGGGGGGGKHGGGGGGGGKHGGGNGGGGKH 80

Query: 1364 XGGG 1375
             GGG
Sbjct: 81   GGGG 84


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
            protein.
          Length = 147

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG        GGGG          +  GGGG     +     F   + GGG   
Sbjct: 17   GGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG----DRGGRGGFGGGRGGGGRGG 72

Query: 1364 XGGG 1375
             GGG
Sbjct: 73   GGGG 76


>BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p
           protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 21/48 (43%), Positives = 22/48 (45%)
 Frame = +1

Query: 787 KKKXGXKKXXXXXKKXKKXGGKKKXXFFXGKKKXXGGXKKKXXLKKKK 930
           +KK   KK     KK KK   KKK      KKK     KKK   KKKK
Sbjct: 444 QKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 491


>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
            protein.
          Length = 344

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG        GGGG          +  GGGG     +     F   + GGG   
Sbjct: 10   GGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG----DRGGRGGFGGGRGGGGRGG 65

Query: 1364 XGGG 1375
             GGG
Sbjct: 66   GGGG 69


>AE013599-3071|AAF46625.1|  239|Drosophila melanogaster CG15225-PA
            protein.
          Length = 239

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 1242 PPPPFFXXXXXXPPXXPPPP 1183
            PPPP++      PP  PPPP
Sbjct: 190  PPPPYYPPYPYYPPPPPPPP 209


>U13178-1|AAA86955.1|  404|Drosophila melanogaster RNA binding protein
            protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG        GGGG       +  +  GGGG       +       + GGG   
Sbjct: 217  GGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGR-----YDRGGGGGGG 271

Query: 1364 XGGG 1375
             GGG
Sbjct: 272  GGGG 275


>M15765-1|AAA70425.1|  365|Drosophila melanogaster unknown protein
            protein.
          Length = 365

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG        GGGG       +  +  GGGG       +       + GGG   
Sbjct: 179  GGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGR-----YDRGGGGGGG 233

Query: 1364 XGGG 1375
             GGG
Sbjct: 234  GGGG 237


>L37083-1|AAC41563.1|  404|Drosophila melanogaster RNA binding protein
            protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG        GGGG       +  +  GGGG       +       + GGG   
Sbjct: 217  GGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGR-----YDRGGGGGGG 271

Query: 1364 XGGG 1375
             GGG
Sbjct: 272  GGGG 275


>BT029607-1|ABL75666.1|  337|Drosophila melanogaster IP17050p protein.
          Length = 337

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 1251 FFXPPPPFFXXXXXXPPXXPPPP 1183
            ++ PPPPF+      PP  PP P
Sbjct: 212  YYPPPPPFYPPYYGYPPYYPPYP 234


>BT023644-1|AAY85044.1|  114|Drosophila melanogaster IP05560p protein.
          Length = 114

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 1242 PPPPFFXXXXXXPPXXPPPP 1183
            PPPP F      PP  PPPP
Sbjct: 84   PPPPQFRQRRQAPPGMPPPP 103


>AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA
            protein.
          Length = 798

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXX---KXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGG 1354
            GGGG  GG           GGGG  +     +    G GG     +     +     GGG
Sbjct: 707  GGGGRYGGGFGSRDYRQSSGGGGGGRSGPPPRSGGSGSGGGGGSYRSNGNSYGGNSGGGG 766

Query: 1355 XXXXGGG 1375
                G G
Sbjct: 767  YYGGGAG 773


>AE014296-852|AAF47904.2|  242|Drosophila melanogaster CG11345-PA
            protein.
          Length = 242

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = -2

Query: 1293 PPPPXFFFFFXXXXFFXPPPPFFXXXXXXPPXXPPPP 1183
            PPPP          +  PPPP        P   PPPP
Sbjct: 113  PPPPVVKVNPPKPAYLPPPPPVVKVNPPKPSYLPPPP 149



 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = -2

Query: 1293 PPPPXFFFFFXXXXFFXPPPPFFXXXXXXPPXXPPPP 1183
            PPPP          +  PPPP        P   PPPP
Sbjct: 130  PPPPVVKVNPPKPSYLPPPPPVVKVNPPKPAYVPPPP 166


>AE013599-3023|AAF57461.1|  114|Drosophila melanogaster CG13428-PA
            protein.
          Length = 114

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 1242 PPPPFFXXXXXXPPXXPPPP 1183
            PPPP F      PP  PPPP
Sbjct: 84   PPPPQFRQRRQAPPGMPPPP 103


>X71975-1|CAA50795.1|  239|Drosophila melanogaster GCR 101 protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 19/64 (29%), Positives = 21/64 (32%)
 Frame = +2

Query: 1184 GGGGXXGGXXXXXXKXGGGGKKKXXXXKKKKXXGGGGXXXXXKKKXXXFXXKKXGGGXXX 1363
            GGGG  GG        GGGG+            GG G           F   + GGG   
Sbjct: 174  GGGGGFGGRGGRGGGRGGGGRGGGGGRGGGGFRGGAGRNGGGGGGGGGFNRGRGGGGGGG 233

Query: 1364 XGGG 1375
             G G
Sbjct: 234  GGRG 237


>AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA
            protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 21/63 (33%), Positives = 23/63 (36%)
 Frame = -2

Query: 1371 PPXXXXPPPFFFXKKXXFFFFXXXXXPPPPXFFFFFXXXXFFXPPPPFFXXXXXXPPXXP 1192
            PP    PPP    KK  +        PPPP          +  PPPP        PP  P
Sbjct: 264  PPPVYVPPP---TKKVIY-----TPPPPPPT-----KKVVYTPPPPPPTKKVVYTPPPPP 310

Query: 1191 PPP 1183
            PPP
Sbjct: 311  PPP 313


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,461,782
Number of Sequences: 53049
Number of extensions: 855008
Number of successful extensions: 4601
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3048
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8290582848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)