Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O16
         (1294 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1199 - 9657169-9657254,9657369-9657395,9657485-9657553,965...   171   1e-42
05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343...   168   9e-42
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443...   162   5e-40
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929...    30   3.5  
03_05_0830 + 28034179-28035492                                         29   8.0  

>01_01_1199 -
           9657169-9657254,9657369-9657395,9657485-9657553,
           9657922-9658023,9659895-9660000,9660145-9660165
          Length = 136

 Score =  171 bits (415), Expect = 1e-42
 Identities = 78/107 (72%), Positives = 91/107 (85%)
 Frame = +2

Query: 125 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 304
           MVAAKK KK+ ++IN++L LVMKSGKY LGYK  L+TLR  KAKLVII+ N PPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 305 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITT 445
           EYYA+LAK  VHH+ GNN++LGTACGKY+RVC L+I DPGDSDII T
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107


>05_05_0300 +
           23932947-23933196,23934022-23934123,23934249-23934317,
           23934406-23934446
          Length = 153

 Score =  168 bits (408), Expect = 9e-42
 Identities = 75/108 (69%), Positives = 87/108 (80%)
 Frame = +2

Query: 128 VAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 307
           V A  QKK+ ++IN++L LVMKSGKY LGYK  LKTLR  K KL+I+A N PPLRKSEIE
Sbjct: 43  VVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEIE 102

Query: 308 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 451
           YYA+L K  VHH+ GNN++LGTACGKYYRVC L+I DPGDSDII T P
Sbjct: 103 YYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTP 150


>01_06_1103 -
           34543915-34543955,34544069-34544137,34544294-34544395,
           34545603-34545708,34545998-34546079,34546850-34547142
          Length = 230

 Score =  162 bits (394), Expect = 5e-40
 Identities = 72/103 (69%), Positives = 83/103 (80%)
 Frame = +2

Query: 146 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 325
           KK  E IN++L LVMKSGKY LGYK  LKTLR  K KLVI+A N PPLRKSEIEYYA+L 
Sbjct: 126 KKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRKSEIEYYAMLG 185

Query: 326 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 454
           K  V+H++GNN++LGTACGKYYRVC L++ DPGDSDI   LPE
Sbjct: 186 KVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPGDSDITKQLPE 228


>06_01_1127 +
           9294079-9294193,9294300-9294369,9294611-9294716,
           9295665-9295805,9296377-9296475
          Length = 176

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
 Frame = +2

Query: 176 LALVMKSGKY-CL--GYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG--VH 340
           L LV ++ +  CL  G K+ +K++R+G+  L IIA N  P+    I +  +L +     +
Sbjct: 33  LKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGNISPI--DVITHVPILCEEANIPY 90

Query: 341 HYSGNNIELGTA-CGKYYRVCTLAITDPGDSDI 436
            Y  +  +L TA   K    C L +T P   ++
Sbjct: 91  VYVPSKEDLATAGTTKRPTCCVLVLTKPAKGEL 123


>03_05_0830 + 28034179-28035492
          Length = 437

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 194 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 277
           +GKY  G   TLKTL  G  + +I+ +N
Sbjct: 299 TGKYVFGVDDTLKTLEMGAVETLIVWEN 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,305,869
Number of Sequences: 37544
Number of extensions: 439251
Number of successful extensions: 2801
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2382
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4027319592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)