Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O15
(1282 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.34
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.0
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 4.2
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 27 4.2
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 27 5.6
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 27 5.6
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 27 7.4
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 27 7.4
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 27 7.4
SPCC1259.01c |rps1802|rps18-2, SPCC825.06c|40S ribosomal protein... 26 9.7
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 9.7
SPBC16D10.11c |rps1801|rps18-1|40S ribosomal protein S18|Schizos... 26 9.7
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 26 9.7
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.1 bits (67), Expect = 0.34
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 378 DKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEH-KLIIQERALR 554
++ + Q + D+ +L +S K++ EMQ +G E ++ EEH KL Q ++
Sbjct: 659 EELLDNQQKLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIK 718
Query: 555 TLFADAEKEERELFATMSAAVKLGHERERAHAERNK 662
F + R+L + + + L + ++ K
Sbjct: 719 NQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKK 754
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 776 QERERPVHHRGGRDRQPGRHHGGDEDR 856
+E E P HHRG D++ HH G +D+
Sbjct: 348 EEHEGPEHHRGPEDKE---HHKGPKDK 371
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 716 DDKQSPEDGRVQGHDGAADGQERERPVHHRGGRDRQPGRHH 838
DD +D R + H+ D ++RE P HH G P H
Sbjct: 175 DDSVFFDDERPKHHE--FDDEDREFPAHHEPGEHMPPPPMH 213
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 746 VQGHDGAADGQERERPVHHRGGRDRQPGRHHGGDEDR 856
++ H+G + E HH+G +D++ HH G +D+
Sbjct: 347 LEEHEGPEHHRGPEDKEHHKGPKDKE---HHKGPKDK 380
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 4.2
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 KYXNLTKKVQ--ALVTKYEKFTGVEXIMAIQ-NTVIDAQDKFIAAQDRRRDVGRQLANIE 440
K+ N K+ + ALV K++K T E +T+ D F A+ + GR++ N+
Sbjct: 4 KFSNFFKEAEHPALVKKFDKSTTDESSSKEDYSTMSDLWKMFSKAKSELSN-GRRVENLT 62
Query: 441 SRLKELHAEMQNTMKGDEKYL 503
RL ++ + T GD L
Sbjct: 63 WRLMSINLQKNLTPNGDSNTL 83
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 800 HRGGRDRQPGRHHGGDEDRVRLPG-TISPKLEVDA 901
HR R R+PGR E + +PG T+S + E D+
Sbjct: 99 HRKNRLRRPGRFPVRQESTIDIPGLTVSKRTENDS 133
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +3
Query: 402 RRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQER 545
R+ + +QL+N + +L+ ++ ++ + EE+K+I QER
Sbjct: 332 RKEQLLKQLSNAQEKLEHEQHSRNQKLEAAKQRMDNIREEYKVITQER 379
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 388 MNLSCASITVFCIAIIXSTPVNFSY--LVTKACTFLVKL 278
M L A+ CI ++ T +NF+Y L CT +V L
Sbjct: 144 MRLWNAAFGTLCIPLVYFTALNFNYSFLAATLCTLMVAL 182
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 7.4
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 351 IQNTVIDAQDKFIAA-QDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHK 527
+Q+ V +A ++ A+ +D+++ + ++ IE K+ ++ Q +K +KY LC + +
Sbjct: 106 LQDDVENAFTRYAASLKDKKKMI---VSGIEKVHKDKLSKHQALVKAQDKYHYLCKKVNY 162
Query: 528 LIIQERALRTLFADAEKEERELFATMSAAVKLGHERERA-HAERNKY 665
+ Q+ L + EK +L T +A + + A A R+ Y
Sbjct: 163 YVSQQNML--FGKELEKNNAKLNKTQNAITASSSDYQSAVAAVRDSY 207
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 850 FIASVMSARLAV-PPPAMVYRTLALLAICCSIMSLNSAIF 734
FI + R AV PPP R+ A L C S LN +F
Sbjct: 336 FIYDTFTKRNAVLPPPFFKNRSSAALLACSSFFYLNYMLF 375
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = -1
Query: 397 WAAMNLSCASITVFCIAIIXSTPVNFSYLVTKACTFLVKLXYLKRSATSETXXAGTXL 224
+ A++ +C+++ V + +F+ +V + CT L+ + L S+TSET G+ +
Sbjct: 177 YVALSFACSALIVLPTKFLARFS-SFN-VVFQICTILIFIISLAASSTSETRNTGSYI 232
>SPCC1259.01c |rps1802|rps18-2, SPCC825.06c|40S ribosomal protein
S18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 152
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 336 EXIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANI 437
+ I+ + NT +D + K + A + + VGR+ ANI
Sbjct: 10 QHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANI 43
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 357 NTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEM--QNTMKGDEKYLQLCTEEHKL 530
N IDA ++ R + G+ L IES+L + + M Q + +E+ + ++ ++
Sbjct: 484 NKCIDACNEASEVDRREPNTGKNLREIESQLSKCMSAMASQRQNETEEETMARIQKDPEV 543
Query: 531 --IIQERALRTLFADAEKEERELFATM 605
I+Q+ A++ + A + L M
Sbjct: 544 LGILQDPAMQAILGQARENPAALMEHM 570
>SPBC16D10.11c |rps1801|rps18-1|40S ribosomal protein
S18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 152
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 336 EXIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANI 437
+ I+ + NT +D + K + A + + VGR+ ANI
Sbjct: 10 QHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANI 43
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 641 PLPLVAQLHGGRHRGEQLAF 582
P+P L+GGRH G LAF
Sbjct: 148 PVPSFNVLNGGRHAGGDLAF 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,671,621
Number of Sequences: 5004
Number of extensions: 66850
Number of successful extensions: 216
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 697499478
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -