Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O15
         (1282 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    30   0.050
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    30   0.050
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    30   0.050
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    30   0.050
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   4.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   4.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   4.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   5.7  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   10.0 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   10.0 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   10.0 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   10.0 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   10.0 

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.050
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 483 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVK---LGHERERAHAE 653
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K      ER R   E
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 654 RNK 662
           R +
Sbjct: 73  RER 75


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.050
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 483 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVK---LGHERERAHAE 653
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K      ER R   E
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 654 RNK 662
           R +
Sbjct: 73  RER 75


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.050
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 483 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVK---LGHERERAHAE 653
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K      ER R   E
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 654 RNK 662
           R +
Sbjct: 73  RER 75


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.050
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 483 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVK---LGHERERAHAE 653
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K      ER R   E
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 654 RNK 662
           R +
Sbjct: 73  RER 75


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 459 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 349
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 459 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 349
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 459 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 349
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 10/57 (17%), Positives = 25/57 (43%)
 Frame = +3

Query: 750 RDMMEQQMARSASVLYTIAGGGTASRADITEAMKTEFAYQEQLAQNWKLMQENINHL 920
           RD  E++ +R   ++ +++     +  +        + Y      N+K +  NIN++
Sbjct: 68  RDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYI 124


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 313 NMKNSRESKXLWRYKTR*STRRTNSLLPKI 402
           N  + R+ +  W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 313 NMKNSRESKXLWRYKTR*STRRTNSLLPKI 402
           N  + R+ +  W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 313 NMKNSRESKXLWRYKTR*STRRTNSLLPKI 402
           N  + R+ +  W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 313 NMKNSRESKXLWRYKTR*STRRTNSLLPKI 402
           N  + R+ +  W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 815 PAPRDGVQDARAPGHLLLHH 756
           P  +D  + AR+  HLL HH
Sbjct: 749 PEWKDLAKKARSVNHLLTHH 768


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,321
Number of Sequences: 438
Number of extensions: 5918
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43943058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)